[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
3800	202967_at	NM_001512	GSTA4		glutathione S-transferase alpha 4
19848	235405_at	N79662	GSTA4		glutathione S-transferase alpha 4

Fetching correlation data, please wait...
Getting list of correlations for id 3800.
Getting list of p-values for id 3800.
1 of 2 done.
Getting list of correlations for id 19848.
Getting list of p-values for id 19848.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.227 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	202967_at	225189_s_at	AA194149	RAPH1	0.820885	1.193798e-21	5.519403e-17	5.519403e-17
2	202967_at	212958_x_at	AI022882	PAM	0.815434	3.632300e-21	1.679358e-16	8.396789e-17
3	202967_at	202011_at	NM_003257	TJP1	0.813995	4.842492e-21	2.238878e-16	7.462926e-17
4	202967_at	224928_at	AK024846	SETD7	0.808028	1.555004e-20	7.189406e-16	1.797352e-16
5	202967_at	225525_at	AB051458	KIAA1671	0.805003	2.765982e-20	1.278824e-15	2.557649e-16
6	202967_at	216215_s_at	AL049748	RBM9	0.804306	3.154537e-20	1.458468e-15	2.430781e-16
7	202967_at	225021_at	AA861416	ZNF532	0.802875	4.123334e-20	1.906382e-15	2.723403e-16
8	202967_at	200771_at	NM_002293	LAMC1	0.801527	5.296709e-20	2.448880e-15	3.061100e-16
9	202967_at	225745_at	AV725248	LRP6	0.798044	1.002671e-19	4.635749e-15	5.150833e-16
10	202967_at	214620_x_at	BF038548	PAM	0.795424	1.607157e-19	7.430530e-15	7.430530e-16
11	202967_at	203910_at	NM_004815	ARHGAP29	0.794541	1.881166e-19	8.697383e-15	7.906712e-16
12	202967_at	226380_at	N21442	PTPN21	0.790166	4.059731e-19	1.876976e-14	1.564147e-15
13	202967_at	212503_s_at	N22859	DIP2C	0.788307	5.597693e-19	2.588037e-14	1.990798e-15
14	202967_at	202336_s_at	NM_000919	PAM	0.786951	7.062252e-19	3.265162e-14	2.332258e-15
15	202967_at	203874_s_at	NM_003069	SMARCA1	0.786027	8.264705e-19	3.821104e-14	2.547403e-15
16	202967_at	225188_at	AA194149	RAPH1	0.785148	9.592869e-19	4.435167e-14	2.771979e-15
17	202967_at	213428_s_at	AA292373	COL6A1	0.783369	1.294169e-18	5.983460e-14	3.519682e-15
18	202967_at	227792_at	AA490685	ITPRIPL2	0.783297	1.309923e-18	6.056296e-14	3.364609e-15
19	202967_at	209147_s_at	AB000888	PPAP2A	0.778033	3.124573e-18	1.444615e-13	7.603238e-15
20	202967_at	209386_at	AI346835	TM4SF1	0.777290	3.525418e-18	1.629942e-13	8.149709e-15
21	202967_at	218651_s_at	NM_018357	LARP6	0.775953	4.376087e-18	2.023240e-13	9.634476e-15
22	202967_at	200897_s_at	NM_016081	PALLD	0.774952	5.140671e-18	2.376738e-13	1.080335e-14
23	202967_at	204688_at	NM_003919	SGCE	0.773868	6.112998e-18	2.826283e-13	1.228819e-14
24	202967_at	209656_s_at	AL136550	TMEM47	0.772428	7.684218e-18	3.552721e-13	1.480300e-14
25	202967_at	213029_at	BG478428	NFIB	0.771921	8.325937e-18	3.849414e-13	1.539766e-14
26	202967_at	201215_at	NM_005032	PLS3	0.771464	8.947187e-18	4.136642e-13	1.591016e-14
27	202967_at	204797_s_at	NM_004434	EML1	0.770487	1.043191e-17	4.823089e-13	1.786329e-14
28	202967_at	224894_at	BF247906	YAP1	0.770442	1.050543e-17	4.857083e-13	1.734672e-14
29	202967_at	235489_at	AI583530	RHOJ	0.770097	1.108882e-17	5.126803e-13	1.767863e-14
30	202967_at	231807_at	AL157473	KIAA1217	0.769442	1.228345e-17	5.679131e-13	1.893044e-14
31	202967_at	228370_at	BF114870	SNRPN	0.766724	1.871153e-17	8.651091e-13	2.790675e-14
32	202967_at	225162_at	BG285417	SH3D19	0.764392	2.672673e-17	1.235683e-12	3.861511e-14
33	202967_at	212120_at	BE897886	RHOQ	0.763068	3.266840e-17	1.510391e-12	4.576942e-14
34	202967_at	223279_s_at	AF322916	UACA	0.762249	3.696073e-17	1.708843e-12	5.026007e-14
35	202967_at	204359_at	NM_013231	FLRT2	0.762198	3.724262e-17	1.721875e-12	4.919644e-14
36	202967_at	210139_s_at	L03203	PMP22	0.761762	3.976662e-17	1.838570e-12	5.107138e-14
37	202967_at	226282_at	AW129783	PTPN14	0.761350	4.230232e-17	1.955806e-12	5.285961e-14
38	202967_at	227274_at	AI709389	SYNJ2BP	0.761275	4.278061e-17	1.977918e-12	5.205049e-14
39	202967_at	225688_s_at	AK025444	PHLDB2	0.760172	5.043446e-17	2.331787e-12	5.978941e-14
40	202967_at	212327_at	AK026815	LIMCH1	0.759315	5.729213e-17	2.648844e-12	6.622110e-14
41	202967_at	215016_x_at	BC004912	DST	0.759114	5.902279e-17	2.728860e-12	6.655755e-14
42	202967_at	225274_at	BF247054	PCYOX1	0.759020	5.985052e-17	2.767129e-12	6.588402e-14
43	202967_at	212590_at	AI431643	RRAS2	0.758553	6.413115e-17	2.965040e-12	6.895441e-14
44	202967_at	203329_at	NM_002845	PTPRM	0.758281	6.675801e-17	3.086490e-12	7.014749e-14
45	202967_at	201681_s_at	AB011155	DLG5	0.758204	6.751794e-17	3.121625e-12	6.936944e-14
46	202967_at	212764_at	AI806174	ZEB1	0.758173	6.782777e-17	3.135949e-12	6.817281e-14
47	202967_at	212254_s_at	AI798790	DST	0.756125	9.160735e-17	4.235374e-12	9.011434e-14
48	202967_at	210946_at	AF014403	PPAP2A	0.756066	9.240179e-17	4.272104e-12	8.900217e-14
49	202967_at	226322_at	BF109231	TMTC1	0.755580	9.919194e-17	4.586040e-12	9.359265e-14
50	202967_at	206385_s_at	NM_020987	ANK3	0.754284	1.197279e-16	5.535501e-12	1.107100e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation