[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
22677	52255_s_at	AI984221	COL5A3		collagen, type V, alpha 3

Fetching correlation data, please wait...
Getting list of correlations for id 22677.
Getting list of p-values for id 22677.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.152 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	52255_s_at	211964_at	X05610	COL4A2	0.700825	1.155841e-13	2.671957e-9	2.671957e-9
2	52255_s_at	201655_s_at	M85289	HSPG2	0.700045	1.263321e-13	2.920419e-9	1.460210e-9
3	52255_s_at	226198_at	AV751731	TOM1L2	0.691165	3.412212e-13	7.888010e-9	2.629337e-9
4	52255_s_at	203238_s_at	NM_000435	NOTCH3	0.689027	4.311906e-13	9.967832e-9	2.491958e-9
5	52255_s_at	45297_at	AI417917	EHD2	0.683540	7.788431e-13	1.800452e-8	3.600903e-9
6	52255_s_at	221529_s_at	AF326591	PLVAP	0.675385	1.832395e-12	4.235948e-8	7.059913e-9
7	52255_s_at	212494_at	AB028998	TENC1	0.650577	2.109177e-11	4.875785e-7	6.965407e-8
8	52255_s_at	211980_at	AI922605	COL4A1	0.644016	3.877735e-11	8.964160e-7	1.120520e-7
9	52255_s_at	44702_at	R77097	SYDE1	0.641018	5.097188e-11	1.178317e-6	1.309241e-7
10	52255_s_at	213075_at	AL050002	OLFML2A	0.638736	6.263858e-11	1.448016e-6	1.448016e-7
11	52255_s_at	207076_s_at	NM_000050	ASS1	0.638365	6.476471e-11	1.497166e-6	1.361060e-7
12	52255_s_at	212771_at	AU150943	FAM171A1	0.629256	1.448535e-10	3.348579e-6	2.790483e-7
13	52255_s_at	207390_s_at	NM_006932	SMTN	0.625226	2.051066e-10	4.741449e-6	3.647269e-7
14	52255_s_at	207191_s_at	NM_005545	ISLR	0.624489	2.184555e-10	5.050036e-6	3.607169e-7
15	52255_s_at	226377_at	AI093722		0.623092	2.460738e-10	5.688487e-6	3.792325e-7
16	52255_s_at	200788_s_at	NM_003768	PEA15	0.617964	3.790809e-10	8.763212e-6	5.477008e-7
17	52255_s_at	216331_at	AK022548	ITGA7	0.613168	5.639220e-10	1.303619e-5	7.668344e-7
18	52255_s_at	219091_s_at	NM_024756	MMRN2	0.612573	5.921282e-10	1.368823e-5	7.604571e-7
19	52255_s_at	222450_at	AL035541	PMEPA1	0.612456	5.978197e-10	1.381980e-5	7.273578e-7
20	52255_s_at	228109_at	AI912976	RASGRF2	0.610996	6.735401e-10	1.557023e-5	7.785114e-7
21	52255_s_at	216215_s_at	AL049748	RBM9	0.610979	6.744836e-10	1.559204e-5	7.424779e-7
22	52255_s_at	213428_s_at	AA292373	COL6A1	0.610901	6.787932e-10	1.569166e-5	7.132573e-7
23	52255_s_at	221016_s_at	NM_031283	TCF7L1	0.609073	7.873968e-10	1.820225e-5	7.914022e-7
24	52255_s_at	212169_at	AL050187	FKBP9	0.607205	9.154739e-10	2.116301e-5	8.817921e-7
25	52255_s_at	212775_at	AI978623	OBSL1	0.607052	9.268332e-10	2.142560e-5	8.570241e-7
26	52255_s_at	201058_s_at	NM_006097	MYL9	0.606243	9.889798e-10	2.286225e-5	8.793171e-7
27	52255_s_at	213422_s_at	AW888223	MXRA8	0.603688	1.212648e-9	2.803279e-5	1.038252e-6
28	52255_s_at	206858_s_at	NM_004503	HOXC6	0.602743	1.307018e-9	3.021434e-5	1.079084e-6
29	52255_s_at	34406_at	AB011174	PACS2	0.602474	1.335211e-9	3.086607e-5	1.064347e-6
30	52255_s_at	202112_at	NM_000552	VWF	0.602345	1.348823e-9	3.118075e-5	1.039358e-6
31	52255_s_at	224817_at	W93554	SH3PXD2A	0.601169	1.480082e-9	3.421505e-5	1.103711e-6
32	52255_s_at	209487_at	D84109	RBPMS	0.598698	1.796470e-9	4.152900e-5	1.297781e-6
33	52255_s_at	229265_at	AA927480	SKI	0.597064	2.040232e-9	4.716403e-5	1.429213e-6
34	52255_s_at	202796_at	NM_007286	SYNPO	0.595693	2.268944e-9	5.245118e-5	1.542682e-6
35	52255_s_at	209356_x_at	AB030655	EFEMP2	0.592199	2.967544e-9	6.860072e-5	1.960021e-6
36	52255_s_at	205382_s_at	NM_001928	CFD	0.586857	4.446371e-9	1.027868e-4	2.855188e-6
37	52255_s_at	212647_at	NM_006270	RRAS	0.583753	5.605042e-9	1.295718e-4	3.501939e-6
38	52255_s_at	222449_at	AL035541	PMEPA1	0.583422	5.744223e-9	1.327892e-4	3.494453e-6
39	52255_s_at	213069_at	AI148659	HEG1	0.583045	5.906856e-9	1.365488e-4	3.501251e-6
40	52255_s_at	227923_at	BF439330	SHANK3	0.582724	6.048747e-9	1.398289e-4	3.495722e-6
41	52255_s_at	208779_x_at	L20817	DDR1	0.581378	6.680775e-9	1.544395e-4	3.766816e-6
42	52255_s_at	203516_at	NM_003098	SNTA1	0.579472	7.683234e-9	1.776133e-4	4.228889e-6
43	52255_s_at	225080_at	BG251821	MYO1C	0.575958	9.921048e-9	2.293449e-4	5.333601e-6
44	52255_s_at	202409_at	X07868		0.573917	1.149245e-8	2.656710e-4	6.037977e-6
45	52255_s_at	211959_at	AW007532	IGFBP5	0.573582	1.177169e-8	2.721261e-4	6.047247e-6
46	52255_s_at	202801_at	NM_002730	PRKACA	0.572197	1.299812e-8	3.004775e-4	6.532120e-6
47	52255_s_at	218546_at	NM_024709	C1orf115	0.571814	1.335900e-8	3.088199e-4	6.570636e-6
48	52255_s_at	209121_x_at	M64497	NR2F2	0.569680	1.554529e-8	3.593606e-4	7.486679e-6
49	52255_s_at	218651_s_at	NM_018357	LARP6	0.569467	1.578229e-8	3.648392e-4	7.445698e-6
50	52255_s_at	227195_at	AA603467	ZNF503	0.569275	1.599758e-8	3.698161e-4	7.396323e-6

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation