[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
2049	200958_s_at	NM_005625	SDCBP		syndecan binding protein (syntenin)

Fetching correlation data, please wait...
Getting list of correlations for id 2049.
Getting list of p-values for id 2049.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.131 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	200958_s_at	226508_at	AI042019	PHC3	0.737284	1.274888e-15	2.947159e-11	2.947159e-11
2	200958_s_at	217746_s_at	NM_013374	PDCD6IP	0.728590	3.988429e-15	9.220050e-11	4.610025e-11
3	200958_s_at	212435_at	AA205593	TRIM33	0.716267	1.866877e-14	4.315660e-10	1.438553e-10
4	200958_s_at	212579_at	AB014550	SMCHD1	0.716138	1.896561e-14	4.384281e-10	1.096070e-10
5	200958_s_at	239355_at	BF675979		0.713704	2.547640e-14	5.889379e-10	1.177876e-10
6	200958_s_at	208724_s_at	BC000905	RAB1A	0.707332	5.438702e-14	1.257265e-9	2.095441e-10
7	200958_s_at	235766_x_at	AA743462	RAB27A	0.704872	7.249285e-14	1.675817e-9	2.394025e-10
8	200958_s_at	217732_s_at	AF092128	ITM2B	0.703462	8.536639e-14	1.973415e-9	2.466768e-10
9	200958_s_at	202228_s_at	NM_017455	NPTN	0.701824	1.030792e-13	2.382881e-9	2.647646e-10
10	200958_s_at	218319_at	NM_020651	PELI1	0.699926	1.280570e-13	2.960295e-9	2.960295e-10
11	200958_s_at	212335_at	AW167793	GNS	0.692901	2.817816e-13	6.513945e-9	5.921769e-10
12	200958_s_at	226251_at	AW295549	ASXL2	0.690513	3.665439e-13	8.473395e-9	7.061163e-10
13	200958_s_at	212455_at	N36997	YTHDC1	0.681622	9.548173e-13	2.207251e-8	1.697885e-9
14	200958_s_at	211963_s_at	AL516350	ARPC5	0.679778	1.159717e-12	2.680917e-8	1.914941e-9
15	200958_s_at	224984_at	W61007	NFAT5	0.677562	1.462091e-12	3.379917e-8	2.253278e-9
16	200958_s_at	208654_s_at	BF669455	CD164	0.673874	2.140591e-12	4.948403e-8	3.092752e-9
17	200958_s_at	203156_at	NM_016248	AKAP11	0.671028	2.862255e-12	6.616674e-8	3.892161e-9
18	200958_s_at	213044_at	N22548	ROCK1	0.670410	3.047490e-12	7.044882e-8	3.913823e-9
19	200958_s_at	230264_s_at	AA551090	AP1S2	0.668555	3.674874e-12	8.495207e-8	4.471162e-9
20	200958_s_at	222235_s_at	AL139812		0.668249	3.789560e-12	8.760326e-8	4.380163e-9
21	200958_s_at	225988_at	AI819938	HERC4	0.666553	4.490868e-12	1.038154e-7	4.943590e-9
22	200958_s_at	229353_s_at	AW515443	NUCKS1	-0.664956	5.263744e-12	1.216820e-7	5.530999e-9
23	200958_s_at	235812_at	AI935115	TMEM188	0.662693	6.581876e-12	1.521532e-7	6.615358e-9
24	200958_s_at	202677_at	NM_002890	RASA1	0.659610	8.896518e-12	2.056608e-7	8.569200e-9
25	200958_s_at	212176_at	AA902326	SFRS18	0.652133	1.821567e-11	4.210917e-7	1.684367e-8
26	200958_s_at	235623_at	BF526230	ELP2	-0.651574	1.920182e-11	4.438884e-7	1.707263e-8
27	200958_s_at	204181_s_at	T90308	ZBTB43	-0.649069	2.429149e-11	5.615463e-7	2.079801e-8
28	200958_s_at	200059_s_at	BC001360	RHOA	0.648179	2.639435e-11	6.101581e-7	2.179136e-8
29	200958_s_at	225945_at	BF219240	ZNF655	0.646486	3.088777e-11	7.140326e-7	2.462181e-8
30	200958_s_at	202211_at	BC005122	ARFGAP3	0.643905	3.917518e-11	9.056126e-7	3.018709e-8
31	200958_s_at	201034_at	BE545756	ADD3	0.643221	4.170777e-11	9.641586e-7	3.110189e-8
32	200958_s_at	223273_at	AF277185	C14orf142	0.642332	4.523266e-11	1.045643e-6	3.267636e-8
33	200958_s_at	240593_x_at	R98767		-0.642234	4.564032e-11	1.055067e-6	3.197174e-8
34	200958_s_at	226406_at	AI823360	C18orf25	0.640042	5.568115e-11	1.287181e-6	3.785827e-8
35	200958_s_at	201493_s_at	BE778078	PUM2	0.639580	5.805207e-11	1.341990e-6	3.834256e-8
36	200958_s_at	225107_at	AI963008	HNRNPA2B1	0.637997	6.693906e-11	1.547430e-6	4.298418e-8
37	200958_s_at	202770_s_at	NM_004354	CCNG2	0.637995	6.695330e-11	1.547759e-6	4.183133e-8
38	200958_s_at	212487_at	AI673812	GPATCH8	-0.637883	6.762994e-11	1.563401e-6	4.114214e-8
39	200958_s_at	222388_s_at	AF186382	VPS35	0.637813	6.805194e-11	1.573157e-6	4.033735e-8
40	200958_s_at	213015_at	BF448315	BBX	-0.637498	7.000183e-11	1.618232e-6	4.045581e-8
41	200958_s_at	203100_s_at	NM_004824	CDYL	0.636659	7.545850e-11	1.744374e-6	4.254571e-8
42	200958_s_at	209580_s_at	AF114784	MBD4	0.634266	9.334172e-11	2.157781e-6	5.137573e-8
43	200958_s_at	222410_s_at	AF121856	SNX6	0.633923	9.621696e-11	2.224247e-6	5.172668e-8
44	200958_s_at	216652_s_at	AL137673	DR1	0.633624	9.878972e-11	2.283722e-6	5.190277e-8
45	200958_s_at	207243_s_at	NM_001743		0.633264	1.019830e-10	2.357541e-6	5.238980e-8
46	200958_s_at	212721_at	AI810380	SFRS12	0.633198	1.025794e-10	2.371328e-6	5.155061e-8
47	200958_s_at	214055_x_at	AW238632	BAT2L2	-0.633051	1.039170e-10	2.402248e-6	5.111166e-8
48	200958_s_at	64883_at	AI744083	MOSPD2	0.632322	1.108021e-10	2.561412e-6	5.336276e-8
49	200958_s_at	229342_at	AI708256		0.632296	1.110545e-10	2.567246e-6	5.239278e-8
50	200958_s_at	222540_s_at	BG286920	RSF1	-0.632219	1.118097e-10	2.584705e-6	5.169410e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation