[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 7 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
11112	217802_s_at	NM_022731	NUCKS1		nuclear casein kinase and cyclin-dependent kinase substrate 1
13413	222027_at	AW515443	NUCKS1		nuclear casein kinase and cyclin-dependent kinase substrate 1
13615	222424_s_at	BC000805	NUCKS1		nuclear casein kinase and cyclin-dependent kinase substrate 1
14777	224581_s_at	AI707721	NUCKS1		nuclear casein kinase and cyclin-dependent kinase substrate 1
14778	224582_s_at	H09085	NUCKS1		nuclear casein kinase and cyclin-dependent kinase substrate 1
16693	226880_at	AL035851	NUCKS1		nuclear casein kinase and cyclin-dependent kinase substrate 1
18108	229353_s_at	AW515443	NUCKS1		nuclear casein kinase and cyclin-dependent kinase substrate 1

Fetching correlation data, please wait...
Getting list of correlations for id 11112.
Getting list of p-values for id 11112.
1 of 7 done.
Getting list of correlations for id 13413.
Getting list of p-values for id 13413.
2 of 7 done.
Getting list of correlations for id 13615.
Getting list of p-values for id 13615.
3 of 7 done.
Getting list of correlations for id 14777.
Getting list of p-values for id 14777.
4 of 7 done.
Getting list of correlations for id 14778.
Getting list of p-values for id 14778.
5 of 7 done.
Getting list of correlations for id 16693.
Getting list of p-values for id 16693.
6 of 7 done.
Getting list of correlations for id 18108.
Getting list of p-values for id 18108.
7 of 7 done.
Calculating corrections for multiple testing (n=161819), please wait...
Done; whole program took 0.641 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	229353_s_at	208859_s_at	AI650257	ATRX	0.908031	9.948833e-33	1.609910e-27	1.609910e-27
2	229353_s_at	222540_s_at	BG286920	RSF1	0.904494	4.349077e-32	7.037633e-27	3.518817e-27
3	229353_s_at	225041_at	BF678375	MPHOSPH8	0.898894	4.010729e-31	6.490121e-26	2.163374e-26
4	229353_s_at	209088_s_at	T70262	UBN1	0.896313	1.069082e-30	1.729978e-25	4.324945e-26
5	222027_at	229420_at	AI557425	RPL23A	0.896138	1.141270e-30	1.846791e-25	3.693583e-26
6	229353_s_at	238346_s_at	AW973003	TGS1	0.890864	7.804542e-30	1.262923e-24	2.104872e-25
7	229353_s_at	213328_at	AI936517	NEK1	0.888933	1.539450e-29	2.491122e-24	3.558746e-25
8	229353_s_at	229586_at	AW300405	CHD9	0.888857	1.580483e-29	2.557522e-24	3.196903e-25
9	217802_s_at	203318_s_at	NM_021964	ZNF148	0.887983	2.140299e-29	3.463411e-24	3.848235e-25
10	217802_s_at	1554690_a_at	BC041391	TACC1	0.887925	2.183569e-29	3.533430e-24	3.533430e-25
11	229353_s_at	235425_at	AW965339	SGOL2	0.887689	2.368596e-29	3.832838e-24	3.484398e-25
12	217802_s_at	210407_at	AF070670	PPM1A	0.887601	2.441292e-29	3.950474e-24	3.292061e-25
13	217802_s_at	222413_s_at	AW137099	MLL3	0.887458	2.564848e-29	4.150411e-24	3.192624e-25
14	229353_s_at	235266_at	AI139629	ATAD2	0.885404	5.160391e-29	8.350494e-24	5.964638e-25
15	229353_s_at	224631_at	AA758013		0.883970	8.342239e-29	1.349933e-23	8.999552e-25
16	229353_s_at	201996_s_at	AL524033	SPEN	0.881243	2.043525e-28	3.306812e-23	2.066757e-24
17	229353_s_at	214807_at	AI278204		0.879535	3.542321e-28	5.732149e-23	3.371852e-24
18	217802_s_at	227740_at	AW173222	UHMK1	0.878147	5.505855e-28	8.909519e-23	4.949733e-24
19	217802_s_at	215338_s_at	AI688640	NKTR	0.877846	6.054390e-28	9.797154e-23	5.156397e-24
20	217802_s_at	201730_s_at	BF110993	TPR	0.877022	7.841221e-28	1.268859e-22	6.344293e-24
21	229353_s_at	216550_x_at	X80821	ANKRD12	0.874751	1.583561e-27	2.562502e-22	1.220239e-23
22	229353_s_at	236254_at	BE048857	VPS13B	0.874656	1.630662e-27	2.638722e-22	1.199419e-23
23	217802_s_at	231616_at	T72620		0.874200	1.874532e-27	3.033350e-22	1.318848e-23
24	217802_s_at	214843_s_at	AK022864	USP33	0.873196	2.543044e-27	4.115128e-22	1.714637e-23
25	229353_s_at	238350_at	AW967956	UBN2	0.872042	3.599367e-27	5.824459e-22	2.329784e-23
26	229353_s_at	208993_s_at	AW340788	PPIG	0.871703	3.984276e-27	6.447315e-22	2.479737e-23
27	229353_s_at	208974_x_at	BC003572	KPNB1	0.871597	4.112529e-27	6.654853e-22	2.464760e-23
28	217802_s_at	224933_s_at	AA425650	JMJD1C	0.870466	5.754341e-27	9.311617e-22	3.325577e-23
29	222027_at	232118_at	R33735		0.870289	6.063326e-27	9.811614e-22	3.383315e-23
30	217802_s_at	207657_x_at	NM_002270	TNPO1	0.869969	6.663538e-27	1.078287e-21	3.594290e-23
31	217802_s_at	236254_at	BE048857	VPS13B	0.869944	6.712203e-27	1.086162e-21	3.503749e-23
32	229353_s_at	235409_at	AU149225	MGA	0.869367	7.953319e-27	1.286998e-21	4.021869e-23
33	217802_s_at	227039_at	AI674926	AKAP13	0.869271	8.178831e-27	1.323490e-21	4.010576e-23
34	217802_s_at	209579_s_at	AL556619	MBD4	0.868316	1.080487e-26	1.748434e-21	5.142452e-23
35	217802_s_at	223134_at	AI795970	BBX	0.867512	1.363887e-26	2.207028e-21	6.305793e-23
36	229353_s_at	1558747_at	AA336502	SMCHD1	0.866866	1.642719e-26	2.658232e-21	7.383978e-23
37	217802_s_at	225640_at	AA875998	LOC401504	0.866755	1.695773e-26	2.744082e-21	7.416439e-23
38	217802_s_at	209225_x_at	AI653355	TNPO1	0.866731	1.707530e-26	2.763108e-21	7.271336e-23
39	217802_s_at	243768_at	AA026388		0.866710	1.718067e-26	2.780158e-21	7.128611e-23
40	217802_s_at	241508_at	T63605		0.866266	1.950452e-26	3.156202e-21	7.890506e-23
41	217802_s_at	202040_s_at	NM_005056	KDM5A	0.865366	2.520302e-26	4.078327e-21	9.947139e-23
42	222027_at	224375_at	AF271776		0.864630	3.103985e-26	5.022838e-21	1.195914e-22
43	217802_s_at	202379_s_at	AI361805	NKTR	0.864466	3.250756e-26	5.260340e-21	1.223335e-22
44	229353_s_at	232238_at	AK001380	ASPM	0.863253	4.566651e-26	7.389710e-21	1.679479e-22
45	217802_s_at	227454_at	AB037782	TAOK1	0.863232	4.593371e-26	7.432947e-21	1.651766e-22
46	217802_s_at	243963_at	AI473707	SDCCAG8	0.863061	4.817360e-26	7.795404e-21	1.694653e-22
47	229353_s_at	235435_at	BF433048	AASDH	0.863002	4.896988e-26	7.924258e-21	1.686012e-22
48	217802_s_at	1559060_a_at	BF677986	FNIP1	0.862745	5.260357e-26	8.512257e-21	1.773387e-22
49	229353_s_at	202905_x_at	AI796269	NBN	0.862703	5.322568e-26	8.612926e-21	1.757740e-22
50	217802_s_at	1561763_at	U54734		0.862513	5.610320e-26	9.078563e-21	1.815713e-22

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation