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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
20562	238021_s_at	AA954994	CRNDE		colorectal neoplasia differentially expressed (non-protein coding)
20563	238022_at	AA954994	CRNDE		colorectal neoplasia differentially expressed (non-protein coding)

Fetching correlation data, please wait...
Getting list of correlations for id 20562.
Getting list of p-values for id 20562.
1 of 2 done.
Getting list of correlations for id 20563.
Getting list of p-values for id 20563.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.289 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	238022_at	238021_s_at	AA954994	CRNDE	0.843080	8.430060e-24	3.897554e-19	3.897554e-19
2	238021_s_at	238022_at	AA954994	CRNDE	0.843080	8.430060e-24	3.897554e-19	1.948777e-19
3	238021_s_at	225078_at	AV686514	EMP2	0.719999	1.180031e-14	5.455756e-10	1.818585e-10
4	238021_s_at	227070_at	W63754	GLT8D2	0.708911	4.515388e-14	2.087644e-9	5.219111e-10
5	238021_s_at	201215_at	NM_005032	PLS3	0.705561	6.690701e-14	3.093379e-9	6.186757e-10
6	238021_s_at	212535_at	AA142929		0.700035	1.264831e-13	5.847820e-9	9.746367e-10
7	238021_s_at	219213_at	NM_021219	JAM2	0.694931	2.248687e-13	1.039658e-8	1.485226e-9
8	238021_s_at	202011_at	NM_003257	TJP1	0.693767	2.560018e-13	1.183599e-8	1.479499e-9
9	238021_s_at	207069_s_at	NM_005585	SMAD6	0.693278	2.702673e-13	1.249554e-8	1.388393e-9
10	238021_s_at	223366_at	BC004287	ZNF704	0.692439	2.965455e-13	1.371048e-8	1.371048e-9
11	238021_s_at	204464_s_at	NM_001957	EDNRA	0.690907	3.510331e-13	1.622966e-8	1.475424e-9
12	238021_s_at	200878_at	AF052094	EPAS1	0.689091	4.281966e-13	1.979724e-8	1.649770e-9
13	238021_s_at	203216_s_at	NM_004999	MYO6	0.686444	5.705115e-13	2.637703e-8	2.029002e-9
14	238021_s_at	204975_at	NM_001424	EMP2	0.686219	5.845239e-13	2.702488e-8	1.930349e-9
15	238021_s_at	225188_at	AA194149	RAPH1	0.684136	7.308663e-13	3.379087e-8	2.252725e-9
16	238021_s_at	208096_s_at	NM_030820	COL21A1	0.681908	9.263894e-13	4.283069e-8	2.676918e-9
17	238021_s_at	225189_s_at	AA194149	RAPH1	0.678922	1.268627e-12	5.865371e-8	3.450218e-9
18	238021_s_at	214043_at	BF062299	PTPRD	0.678892	1.272582e-12	5.883653e-8	3.268696e-9
19	238021_s_at	212110_at	D31887	SLC39A14	0.672389	2.492132e-12	1.152212e-7	6.064276e-9
20	238021_s_at	204400_at	NM_005864	EFS	0.672247	2.528494e-12	1.169024e-7	5.845120e-9
21	238021_s_at	224694_at	AF279145	ANTXR1	0.671427	2.748673e-12	1.270821e-7	6.051531e-9
22	238021_s_at	203131_at	NM_006206	PDGFRA	0.670587	2.993123e-12	1.383840e-7	6.290183e-9
23	238021_s_at	212327_at	AK026815	LIMCH1	0.667241	4.192533e-12	1.938376e-7	8.427721e-9
24	238021_s_at	204359_at	NM_013231	FLRT2	0.665743	4.867963e-12	2.250654e-7	9.377725e-9
25	238021_s_at	204201_s_at	NM_006264	PTPN13	0.665273	5.100824e-12	2.358315e-7	9.433260e-9
26	238021_s_at	202630_at	AA046411	APPBP2	0.663379	6.151899e-12	2.844269e-7	1.093950e-8
27	238021_s_at	225990_at	W72626	BOC	0.662709	6.571569e-12	3.038299e-7	1.125296e-8
28	238021_s_at	205573_s_at	NM_015976	SNX7	0.662546	6.677796e-12	3.087412e-7	1.102647e-8
29	238021_s_at	228904_at	AW510657	HOXB3	0.662536	6.684628e-12	3.090571e-7	1.065714e-8
30	238022_at	227070_at	W63754	GLT8D2	0.661421	7.456825e-12	3.447588e-7	1.149196e-8
31	238021_s_at	209099_x_at	U73936	JAG1	0.661291	7.552218e-12	3.491693e-7	1.126352e-8
32	238021_s_at	203038_at	NM_002844	PTPRK	0.660330	8.294760e-12	3.834999e-7	1.198437e-8
33	238021_s_at	202620_s_at	NM_000935	PLOD2	0.657669	1.073624e-11	4.963792e-7	1.504179e-8
34	238022_at	212535_at	AA142929		0.657447	1.096867e-11	5.071253e-7	1.491545e-8
35	238021_s_at	226490_at	AA503387	NHSL1	0.657277	1.115016e-11	5.155164e-7	1.472904e-8
36	238021_s_at	218224_at	NM_006029	PNMA1	0.652980	1.681170e-11	7.772719e-7	2.159089e-8
37	238021_s_at	200771_at	NM_002293	LAMC1	0.651185	1.991922e-11	9.209454e-7	2.489042e-8
38	238021_s_at	212538_at	AL576253	DOCK9	0.649427	2.349143e-11	1.086103e-6	2.858165e-8
39	238021_s_at	210139_s_at	L03203	PMP22	0.649034	2.437255e-11	1.126841e-6	2.889335e-8
40	238021_s_at	202853_s_at	NM_002958	RYK	0.648545	2.550849e-11	1.179360e-6	2.948399e-8
41	238021_s_at	204517_at	BE962749	PPIC	0.647308	2.862086e-11	1.323257e-6	3.227455e-8
42	238021_s_at	212353_at	AI479175	SULF1	0.647273	2.871411e-11	1.327568e-6	3.160877e-8
43	238021_s_at	236038_at	N50714		0.646607	3.054292e-11	1.412121e-6	3.284003e-8
44	238021_s_at	201325_s_at	NM_001423	EMP1	0.644743	3.627421e-11	1.677102e-6	3.811595e-8
45	238021_s_at	225227_at	AW294869		0.644460	3.723084e-11	1.721331e-6	3.825179e-8
46	238021_s_at	202342_s_at	NM_015271	TRIM2	0.644415	3.738353e-11	1.728390e-6	3.757369e-8
47	238021_s_at	209493_at	AF338650	PDZD2	0.643949	3.901606e-11	1.803868e-6	3.838018e-8
48	238022_at	204790_at	NM_005904	SMAD7	0.643777	3.963577e-11	1.832520e-6	3.817750e-8
49	238022_at	219213_at	NM_021219	JAM2	0.643562	4.042414e-11	1.868970e-6	3.814224e-8
50	238021_s_at	215111_s_at	AK027071	TSC22D1	0.642314	4.530719e-11	2.094733e-6	4.189465e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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