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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
9468	213362_at	N73931	PTPRD		protein tyrosine phosphatase, receptor type, D
9849	214043_at	BF062299	PTPRD		protein tyrosine phosphatase, receptor type, D

Fetching correlation data, please wait...
Getting list of correlations for id 9468.
Getting list of p-values for id 9468.
1 of 2 done.
Getting list of correlations for id 9849.
Getting list of p-values for id 9849.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.173 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	214043_at	212364_at	BF432550	MYO1B	0.865542	2.397264e-26	1.108351e-21	1.108351e-21
2	214043_at	201667_at	NM_000165	GJA1	0.863120	4.738978e-26	2.191019e-21	1.095509e-21
3	214043_at	227070_at	W63754	GLT8D2	0.852744	7.628527e-25	3.526973e-20	1.175658e-20
4	214043_at	213362_at	N73931	PTPRD	0.850070	1.507957e-24	6.971888e-20	1.742972e-20
5	213362_at	214043_at	BF062299	PTPRD	0.850070	1.507957e-24	6.971888e-20	1.394378e-20
6	214043_at	213435_at	AB028957	SATB2	0.848387	2.300412e-24	1.063573e-19	1.772621e-20
7	214043_at	201117_s_at	NM_001873	CPE	0.833378	8.034919e-23	3.714864e-18	5.306949e-19
8	214043_at	201579_at	NM_005245	FAT1	0.824693	5.365127e-22	2.480513e-17	3.100641e-18
9	214043_at	209031_at	AL519710	CADM1	0.824630	5.436786e-22	2.513643e-17	2.792937e-18
10	213362_at	209031_at	AL519710	CADM1	0.818927	1.788045e-21	8.266849e-17	8.266849e-18
11	213362_at	213909_at	AU147799	LRRC15	0.815872	3.326064e-21	1.537773e-16	1.397975e-17
12	213362_at	212667_at	AL575922	SPARC	0.813333	5.522715e-21	2.553372e-16	2.127810e-17
13	214043_at	211719_x_at	BC005858	FN1	0.811776	7.509742e-21	3.472054e-16	2.670811e-17
14	214043_at	212624_s_at	BF339445	CHN1	0.809720	1.121661e-20	5.185888e-16	3.704206e-17
15	213362_at	221730_at	NM_000393	COL5A2	0.808445	1.435141e-20	6.635233e-16	4.423489e-17
16	213362_at	212364_at	BF432550	MYO1B	0.808071	1.542151e-20	7.129983e-16	4.456239e-17
17	214043_at	211343_s_at	M33653	COL13A1	0.807483	1.726457e-20	7.982099e-16	4.695352e-17
18	214043_at	221729_at	AL575735	COL5A2	0.807395	1.755789e-20	8.117714e-16	4.509841e-17
19	214043_at	226930_at	AI345957	FNDC1	0.806836	1.953571e-20	9.032141e-16	4.753758e-17
20	214043_at	226237_at	AL359062		0.806644	2.026417e-20	9.368938e-16	4.684469e-17
21	214043_at	212850_s_at	AA584297	LRP4	0.805708	2.420691e-20	1.119182e-15	5.329440e-17
22	213362_at	205907_s_at	AI765819	OMD	0.804828	2.858962e-20	1.321813e-15	6.008239e-17
23	214043_at	205907_s_at	AI765819	OMD	0.802365	4.534432e-20	2.096449e-15	9.114996e-17
24	214043_at	212354_at	BE500977	SULF1	0.802152	4.717164e-20	2.180934e-15	9.087223e-17
25	213362_at	201667_at	NM_000165	GJA1	0.801792	5.042922e-20	2.331545e-15	9.326178e-17
26	214043_at	201261_x_at	BC002416	BGN	0.799515	7.668485e-20	3.545447e-15	1.363634e-16
27	214043_at	219304_s_at	NM_025208	PDGFD	0.799419	7.805185e-20	3.608649e-15	1.336537e-16
28	214043_at	237056_at	BF432206	INSC	0.799030	8.379254e-20	3.874064e-15	1.383594e-16
29	214043_at	213909_at	AU147799	LRRC15	0.798365	9.458300e-20	4.372950e-15	1.507914e-16
30	214043_at	216442_x_at	AK026737	FN1	0.797746	1.058322e-19	4.893047e-15	1.631016e-16
31	213362_at	209030_s_at	NM_014333	CADM1	0.797482	1.110105e-19	5.132460e-15	1.655632e-16
32	214043_at	212233_at	AL523076	MAP1B	0.797149	1.178842e-19	5.450258e-15	1.703206e-16
33	214043_at	210495_x_at	AF130095	FN1	0.795396	1.615217e-19	7.467792e-15	2.262967e-16
34	213362_at	205908_s_at	NM_005014	OMD	0.794666	1.839835e-19	8.506294e-15	2.501851e-16
35	214043_at	229802_at	AA147884		0.792481	2.708512e-19	1.252253e-14	3.577867e-16
36	214043_at	205908_s_at	NM_005014	OMD	0.790851	3.603236e-19	1.665920e-14	4.627556e-16
37	213362_at	201579_at	NM_005245	FAT1	0.790835	3.613625e-19	1.670723e-14	4.515468e-16
38	213362_at	229218_at	AA628535	COL1A2	0.787949	5.953065e-19	2.752340e-14	7.243000e-16
39	213362_at	219304_s_at	NM_025208	PDGFD	0.785213	9.488096e-19	4.386726e-14	1.124802e-15
40	214043_at	226695_at	AA775472	PRRX1	0.784504	1.069539e-18	4.944908e-14	1.236227e-15
41	214043_at	201185_at	NM_002775	HTRA1	0.784083	1.148054e-18	5.307914e-14	1.294613e-15
42	213362_at	212624_s_at	BF339445	CHN1	0.783811	1.201590e-18	5.555430e-14	1.322721e-15
43	214043_at	236029_at	AI283093	FAT3	0.783629	1.238946e-18	5.728141e-14	1.332126e-15
44	213362_at	201117_s_at	NM_001873	CPE	0.782525	1.490153e-18	6.889575e-14	1.565812e-15
45	214043_at	204457_s_at	NM_002048	GAS1	0.780992	1.922310e-18	8.887609e-14	1.975024e-15
46	213362_at	224685_at	AI675354	MLLT4	0.779366	2.512652e-18	1.161700e-13	2.525434e-15
47	213362_at	213435_at	AB028957	SATB2	0.777165	3.597884e-18	1.663446e-13	3.539246e-15
48	213362_at	204017_at	NM_006855	KDELR3	0.772175	7.998561e-18	3.698055e-13	7.704280e-15
49	214043_at	202283_at	NM_002615	SERPINF1	0.769139	1.287734e-17	5.953709e-13	1.215043e-14
50	214043_at	203476_at	NM_006670	TPBG	0.768146	1.502476e-17	6.946546e-13	1.389309e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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