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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
8058	211343_s_at	M33653	COL13A1		collagen, type XIII, alpha 1
8248	211809_x_at	M59217	COL13A1		collagen, type XIII, alpha 1

Fetching correlation data, please wait...
Getting list of correlations for id 8058.
Getting list of p-values for id 8058.
1 of 2 done.
Getting list of correlations for id 8248.
Getting list of p-values for id 8248.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.149 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	211343_s_at	201117_s_at	NM_001873	CPE	0.898686	4.344713e-31	2.008734e-26	2.008734e-26
2	211343_s_at	221729_at	AL575735	COL5A2	0.881448	1.912279e-28	8.841233e-24	4.420616e-24
3	211343_s_at	201579_at	NM_005245	FAT1	0.874767	1.576080e-27	7.286848e-23	2.428949e-23
4	211343_s_at	204469_at	NM_002851	PTPRZ1	0.871502	4.230158e-27	1.955771e-22	4.889428e-23
5	211343_s_at	200665_s_at	NM_003118	SPARC	0.862436	5.731625e-26	2.649960e-21	5.299919e-22
6	211343_s_at	212489_at	AI983428	COL5A1	0.853692	5.970546e-25	2.760422e-20	4.600704e-21
7	211343_s_at	229802_at	AA147884		0.853608	6.103045e-25	2.821682e-20	4.030974e-21
8	211343_s_at	205908_s_at	NM_005014	OMD	0.852769	7.579205e-25	3.504170e-20	4.380212e-21
9	211343_s_at	235874_at	AL574912	PRSS35	0.852733	7.648579e-25	3.536244e-20	3.929160e-21
10	211343_s_at	213435_at	AB028957	SATB2	0.852371	8.395601e-25	3.881622e-20	3.881622e-21
11	211343_s_at	209031_at	AL519710	CADM1	0.851985	9.269076e-25	4.285465e-20	3.895877e-21
12	211343_s_at	212364_at	BF432550	MYO1B	0.849734	1.641264e-24	7.588218e-20	6.323515e-21
13	211343_s_at	202404_s_at	NM_000089	COL1A2	0.848192	2.415345e-24	1.116711e-19	8.590083e-21
14	211343_s_at	212667_at	AL575922	SPARC	0.847144	3.132495e-24	1.448278e-19	1.034484e-20
15	211343_s_at	201261_x_at	BC002416	BGN	0.844616	5.818036e-24	2.689911e-19	1.793274e-20
16	211343_s_at	213909_at	AU147799	LRRC15	0.842966	8.664052e-24	4.005738e-19	2.503586e-20
17	211343_s_at	237056_at	BF432206	INSC	0.842465	9.769854e-24	4.516994e-19	2.657056e-20
18	211343_s_at	236028_at	BE466675	IBSP	0.841482	1.234886e-23	5.709372e-19	3.171873e-20
19	211343_s_at	202403_s_at	AA788711	COL1A2	0.837987	2.804567e-23	1.296664e-18	6.824545e-20
20	211343_s_at	205907_s_at	AI765819	OMD	0.836373	4.069407e-23	1.881450e-18	9.407249e-20
21	211343_s_at	213068_at	AI146848	DPT	0.835580	4.879180e-23	2.255840e-18	1.074210e-19
22	211809_x_at	211343_s_at	M33653	COL13A1	0.833509	7.801608e-23	3.606995e-18	1.639543e-19
23	211343_s_at	211809_x_at	M59217	COL13A1	0.833509	7.801608e-23	3.606995e-18	1.568259e-19
24	211343_s_at	203325_s_at	AI130969	COL5A1	0.833008	8.731384e-23	4.036868e-18	1.682028e-19
25	211343_s_at	212488_at	N30339	COL5A1	0.831821	1.138340e-22	5.262999e-18	2.105200e-19
26	211343_s_at	206956_at	NM_000711	BGLAP	0.830553	1.507518e-22	6.969858e-18	2.680715e-19
27	211343_s_at	201667_at	NM_000165	GJA1	0.829573	1.870320e-22	8.647237e-18	3.202680e-19
28	211343_s_at	203304_at	NM_012342	BAMBI	0.825230	4.785561e-22	2.212556e-17	7.901986e-19
29	211809_x_at	213909_at	AU147799	LRRC15	0.817459	2.412785e-21	1.115527e-16	3.846645e-18
30	211343_s_at	212850_s_at	AA584297	LRP4	0.816668	2.832581e-21	1.309615e-16	4.365384e-18
31	211343_s_at	205139_s_at	NM_005715	UST	0.816036	3.218331e-21	1.487963e-16	4.799881e-18
32	211343_s_at	202310_s_at	K01228	COL1A1	0.815234	3.780734e-21	1.747985e-16	5.462452e-18
33	211343_s_at	221730_at	NM_000393	COL5A2	0.814166	4.680657e-21	2.164055e-16	6.557742e-18
34	211809_x_at	206869_at	NM_001267	CHAD	0.811737	7.566776e-21	3.498423e-16	1.028948e-17
35	211343_s_at	206869_at	NM_001267	CHAD	0.808365	1.457359e-20	6.737955e-16	1.925130e-17
36	211343_s_at	214043_at	BF062299	PTPRD	0.807483	1.726457e-20	7.982099e-16	2.217250e-17
37	211809_x_at	203304_at	NM_012342	BAMBI	0.805640	2.452475e-20	1.133877e-15	3.064533e-17
38	211809_x_at	212488_at	N30339	COL5A1	0.805351	2.590410e-20	1.197650e-15	3.151711e-17
39	211343_s_at	229218_at	AA628535	COL1A2	0.804494	3.044448e-20	1.407570e-15	3.609155e-17
40	211809_x_at	200665_s_at	NM_003118	SPARC	0.801658	5.169430e-20	2.390034e-15	5.975086e-17
41	211343_s_at	202283_at	NM_002615	SERPINF1	0.798830	8.690661e-20	4.018040e-15	9.800098e-17
42	211343_s_at	223614_at	AL136588	MMP16	0.795372	1.621992e-19	7.499117e-15	1.785504e-16
43	211343_s_at	203440_at	M34064	CDH2	0.793955	2.087603e-19	9.651823e-15	2.244610e-16
44	211343_s_at	227070_at	W63754	GLT8D2	0.793755	2.163052e-19	1.000065e-14	2.272876e-16
45	211343_s_at	239058_at	BF446723	FOXC2	0.793741	2.168456e-19	1.002564e-14	2.227920e-16
46	211343_s_at	213905_x_at	AA845258	BGN	0.790308	3.960699e-19	1.831190e-14	3.980847e-16
47	211343_s_at	202421_at	AB007935	IGSF3	0.789960	4.207521e-19	1.945305e-14	4.138947e-16
48	211809_x_at	202421_at	AB007935	IGSF3	0.788677	5.252325e-19	2.428360e-14	5.059083e-16
49	211809_x_at	206956_at	NM_000711	BGLAP	0.785581	8.914511e-19	4.121535e-14	8.411296e-16
50	211809_x_at	202310_s_at	K01228	COL1A1	0.782966	1.384442e-18	6.400831e-14	1.280166e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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