[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4642	204051_s_at	AW089415	SFRP4		secreted frizzled-related protein 4

Fetching correlation data, please wait...
Getting list of correlations for id 4642.
Getting list of p-values for id 4642.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.152 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204051_s_at	204052_s_at	NM_003014	SFRP4	0.848206	2.406398e-24	5.562871e-20	5.562871e-20
2	204051_s_at	212354_at	BE500977	SULF1	0.816282	3.062101e-21	7.078660e-17	3.539330e-17
3	204051_s_at	211719_x_at	BC005858	FN1	0.814726	4.185712e-21	9.676110e-17	3.225370e-17
4	204051_s_at	210495_x_at	AF130095	FN1	0.810446	9.740320e-21	2.251670e-16	5.629174e-17
5	204051_s_at	201185_at	NM_002775	HTRA1	0.806063	2.263041e-20	5.231472e-16	1.046294e-16
6	204051_s_at	216442_x_at	AK026737	FN1	0.804966	2.785721e-20	6.439751e-16	1.073292e-16
7	204051_s_at	212464_s_at	X02761	FN1	0.795702	1.529156e-19	3.534951e-15	5.049930e-16
8	204051_s_at	209101_at	M92934	CTGF	0.775791	4.492119e-18	1.038443e-13	1.298054e-14
9	204051_s_at	201579_at	NM_005245	FAT1	0.767040	1.782250e-17	4.120028e-13	4.577809e-14
10	204051_s_at	208131_s_at	NM_000961	PTGIS	0.759558	5.526105e-17	1.277470e-12	1.277470e-13
11	204051_s_at	209031_at	AL519710	CADM1	0.740505	8.260652e-16	1.909615e-11	1.736014e-12
12	204051_s_at	226705_at	BE467261	FGFR1	0.736959	1.331539e-15	3.078119e-11	2.565099e-12
13	204051_s_at	225664_at	AA788946	COL12A1	0.729846	3.391695e-15	7.840581e-11	6.031216e-12
14	204051_s_at	224694_at	AF279145	ANTXR1	0.729646	3.480753e-15	8.046457e-11	5.747469e-12
15	204051_s_at	201744_s_at	NM_002345	LUM	0.726219	5.402301e-15	1.248850e-10	8.325666e-12
16	204051_s_at	213422_s_at	AW888223	MXRA8	0.725421	5.979487e-15	1.382278e-10	8.639237e-12
17	204051_s_at	213707_s_at	NM_005221	DLX5	0.723944	7.206744e-15	1.665983e-10	9.799900e-12
18	204051_s_at	203083_at	NM_003247	THBS2	0.722619	8.513497e-15	1.968065e-10	1.093370e-11
19	204051_s_at	226237_at	AL359062		0.721367	9.955163e-15	2.301335e-10	1.211229e-11
20	204051_s_at	215076_s_at	AU144167	COL3A1	0.720748	1.075315e-14	2.485806e-10	1.242903e-11
21	204051_s_at	202291_s_at	NM_000900	MGP	0.720024	1.176345e-14	2.719357e-10	1.294932e-11
22	204051_s_at	227394_at	W94001	NCAM1	0.717879	1.532793e-14	3.543359e-10	1.610618e-11
23	204051_s_at	212364_at	BF432550	MYO1B	0.717026	1.701692e-14	3.933801e-10	1.710348e-11
24	204051_s_at	201261_x_at	BC002416	BGN	0.716261	1.868353e-14	4.319071e-10	1.799613e-11
25	204051_s_at	37005_at	D28124	NBL1	0.712559	2.923922e-14	6.759230e-10	2.703692e-11
26	204051_s_at	203131_at	NM_006206	PDGFRA	0.712196	3.053931e-14	7.059772e-10	2.715297e-11
27	204051_s_at	212353_at	AI479175	SULF1	0.711234	3.426577e-14	7.921217e-10	2.933784e-11
28	204051_s_at	232054_at	AA040057	PCDH20	0.709869	4.031082e-14	9.318652e-10	3.328090e-11
29	204051_s_at	222433_at	AK025108	ENAH	0.709548	4.187320e-14	9.679828e-10	3.337872e-11
30	204051_s_at	201069_at	NM_004530	MMP2	0.709299	4.312577e-14	9.969384e-10	3.323128e-11
31	204051_s_at	212233_at	AL523076	MAP1B	0.708906	4.517885e-14	1.044400e-9	3.369031e-11
32	204051_s_at	221150_at	NM_020203	MEPE	0.705947	6.396263e-14	1.478624e-9	4.620700e-11
33	204051_s_at	226930_at	AI345957	FNDC1	0.703491	8.508090e-14	1.966815e-9	5.960046e-11
34	204051_s_at	212190_at	AL541302	SERPINE2	0.702780	9.234723e-14	2.134791e-9	6.278797e-11
35	204051_s_at	206766_at	AF112345	ITGA10	0.701862	1.026291e-13	2.372478e-9	6.778507e-11
36	204051_s_at	227070_at	W63754	GLT8D2	0.698989	1.424602e-13	3.293253e-9	9.147925e-11
37	204051_s_at	201431_s_at	NM_001387	DPYSL3	0.698582	1.491745e-13	3.448466e-9	9.320179e-11
38	204051_s_at	235275_at	AA610122	BMP8B	0.697985	1.596042e-13	3.689570e-9	9.709395e-11
39	204051_s_at	202598_at	NM_005979	S100A13	0.697920	1.607785e-13	3.716717e-9	9.530043e-11
40	204051_s_at	202995_s_at	NM_006486	FBLN1	0.697415	1.702112e-13	3.934773e-9	9.836933e-11
41	204051_s_at	203187_at	NM_001380	DOCK1	0.696969	1.789689e-13	4.137225e-9	1.009079e-10
42	204051_s_at	201852_x_at	AI813758	COL3A1	0.696119	1.969019e-13	4.551782e-9	1.083758e-10
43	204051_s_at	232523_at	AU144892	MEGF10	0.695456	2.120647e-13	4.902300e-9	1.140070e-10
44	204051_s_at	219315_s_at	NM_024600	TMEM204	0.694029	2.486475e-13	5.747985e-9	1.306360e-10
45	204051_s_at	201150_s_at	NM_000362	TIMP3	0.693883	2.527003e-13	5.841673e-9	1.298150e-10
46	204051_s_at	215388_s_at	X56210		0.692221	3.037903e-13	7.022721e-9	1.526678e-10
47	204051_s_at	200878_at	AF052094	EPAS1	0.689616	4.043552e-13	9.347478e-9	1.988825e-10
48	204051_s_at	211343_s_at	M33653	COL13A1	0.686777	5.503787e-13	1.272311e-8	2.650647e-10
49	204051_s_at	219304_s_at	NM_025208	PDGFD	0.686414	5.723501e-13	1.323102e-8	2.700208e-10
50	204051_s_at	201325_s_at	NM_001423	EMP1	0.685339	6.424850e-13	1.485233e-8	2.970465e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation