[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
5476	205425_at	NM_005338	HIP1		huntingtin interacting protein 1
16309	226364_at	AU145049	HIP1		huntingtin interacting protein 1

Fetching correlation data, please wait...
Getting list of correlations for id 5476.
Getting list of p-values for id 5476.
1 of 2 done.
Getting list of correlations for id 16309.
Getting list of p-values for id 16309.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.205 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	205425_at	208893_s_at	BC005047	DUSP6	0.678600	1.312015e-12	6.065970e-8	6.065970e-8
2	205425_at	226364_at	AU145049	HIP1	0.596654	2.106317e-9	9.738344e-5	4.869172e-5
3	226364_at	205425_at	NM_005338	HIP1	0.596654	2.106317e-9	9.738344e-5	3.246115e-5
4	205425_at	210176_at	AL050262	TLR1	0.592926	2.807185e-9	1.297874e-4	3.244685e-5
5	205425_at	60815_at	AA601208	POLR2J4	0.580086	7.345745e-9	3.396232e-4	6.792463e-5
6	205425_at	1559500_at	BC036005	VPS8	0.579411	7.718090e-9	3.568382e-4	5.947303e-5
7	205425_at	200848_at	AA479488	AHCYL1	0.575108	1.054829e-8	4.876894e-4	6.966992e-5
8	205425_at	222634_s_at	AF314544	TBL1XR1	0.574999	1.063211e-8	4.915649e-4	6.144562e-5
9	226364_at	227041_at	BE466145	SESTD1	0.573789	1.159811e-8	5.362268e-4	5.958076e-5
10	205425_at	204278_s_at	NM_004215	EBAG9	0.566603	1.930813e-8	8.926919e-4	8.926919e-5
11	205425_at	226663_at	BE670056	ANKRD10	0.565741	2.050874e-8	9.482011e-4	8.620010e-5
12	205425_at	203816_at	NM_001929	DGUOK	0.565094	2.145566e-8	9.919809e-4	8.266507e-5
13	205425_at	226897_s_at	AW169959	ZC3H7A	0.561758	2.703994e-8	1.250165e-3	9.616651e-5
14	205425_at	224854_s_at	AI979301	SLAIN2	0.561604	2.732916e-8	1.263536e-3	9.025261e-5
15	205425_at	212808_at	AI884627	NFATC2IP	0.559460	3.166575e-8	1.464034e-3	9.760228e-5
16	205425_at	222616_s_at	AI806796	USP16	0.558983	3.271440e-8	1.512518e-3	9.453236e-5
17	205425_at	212994_at	BE543527	THOC2	0.558877	3.295323e-8	1.523560e-3	8.962116e-5
18	205425_at	237333_at	T90771	RBBP4	0.558469	3.388460e-8	1.566621e-3	8.703447e-5
19	205425_at	218987_at	NM_018179	ATF7IP	0.557711	3.568025e-8	1.649641e-3	8.682320e-5
20	205425_at	201454_s_at	AW055008	NPEPPS	0.557143	3.708309e-8	1.714500e-3	8.572499e-5
21	205425_at	215412_x_at	AB017007	PMS2L2	0.554841	4.333623e-8	2.003607e-3	9.540988e-5
22	205425_at	218006_s_at	NM_006963	ZNF22	0.552895	4.938763e-8	2.283388e-3	1.037903e-4
23	205425_at	209257_s_at	BF795297	SMC3	0.550375	5.842912e-8	2.701412e-3	1.174527e-4
24	205425_at	212007_at	AI927512	UBXN4	0.548685	6.535065e-8	3.021422e-3	1.258926e-4
25	205425_at	210664_s_at	AF021834	TFPI	0.548010	6.832856e-8	3.159103e-3	1.263641e-4
26	226364_at	202230_s_at	NM_006387	CHERP	0.547203	7.205851e-8	3.331553e-3	1.281367e-4
27	226364_at	204995_at	AL567411	CDK5R1	0.546388	7.601812e-8	3.514622e-3	1.301712e-4
28	205425_at	242946_at	AW293276	CD53	0.545593	8.008012e-8	3.702424e-3	1.322294e-4
29	226364_at	212993_at	AA114166	NACC2	0.544803	8.431914e-8	3.898411e-3	1.344280e-4
30	205425_at	215057_at	U66046	LOC100272228	0.543492	9.183080e-8	4.245705e-3	1.415235e-4
31	205425_at	225730_s_at	AI921788	THUMPD3	0.542892	9.548098e-8	4.414468e-3	1.424022e-4
32	205425_at	225173_at	BE501862	ARHGAP18	0.540519	1.112944e-7	5.145586e-3	1.607996e-4
33	205425_at	204234_s_at	AI476267	ZNF195	0.540310	1.128021e-7	5.215294e-3	1.580392e-4
34	205425_at	223178_s_at	AF245044	NT5DC1	0.539353	1.199459e-7	5.545580e-3	1.631053e-4
35	205425_at	203833_s_at	BF061845	TGOLN2	0.538699	1.250730e-7	5.782623e-3	1.652178e-4
36	205425_at	213239_at	NM_006346	PIBF1	0.538285	1.284259e-7	5.937644e-3	1.649345e-4
37	205425_at	239478_x_at	AI761411		0.537087	1.386167e-7	6.408806e-3	1.732110e-4
38	205425_at	202171_at	AU146275	VEZF1	0.536895	1.403266e-7	6.487860e-3	1.707332e-4
39	226364_at	244313_at	AI052659	CR1	0.533910	1.694993e-7	7.836630e-3	2.009392e-4
40	205425_at	87100_at	AI832249	ABHD2	0.532508	1.851014e-7	8.557980e-3	2.139495e-4
41	205425_at	201965_s_at	NM_015046	SETX	0.530278	2.127674e-7	9.837090e-3	2.399290e-4
42	205425_at	216525_x_at	D38437	PMS2L3	0.529804	2.191380e-7	1.013162e-2	2.412292e-4
43	205425_at	204544_at	NM_007216	HPS5	0.529478	2.236123e-7	1.033849e-2	2.404300e-4
44	205425_at	218947_s_at	NM_018109	MTPAP	0.528430	2.386256e-7	1.103262e-2	2.507413e-4
45	205425_at	242760_x_at	AA808203	PIGB	0.528199	2.420648e-7	1.119162e-2	2.487027e-4
46	205425_at	202053_s_at	L47162	ALDH3A2	0.527852	2.473086e-7	1.143407e-2	2.485667e-4
47	205425_at	215075_s_at	L29511	GRB2	0.526848	2.630969e-7	1.216402e-2	2.588090e-4
48	226364_at	235427_at	AA418074		0.526751	2.646711e-7	1.223680e-2	2.549334e-4
49	205425_at	218521_s_at	NM_018299	UBE2W	0.526670	2.659987e-7	1.229818e-2	2.509833e-4
50	205425_at	212108_at	AB020694	FAF2	0.526434	2.698815e-7	1.247770e-2	2.495540e-4

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation