[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
1095	1559754_at	BC018898	LTB		lymphotoxin beta (TNF superfamily, member 3)
6117	207339_s_at	NM_002341	LTB		lymphotoxin beta (TNF superfamily, member 3)

Fetching correlation data, please wait...
Getting list of correlations for id 1095.
Getting list of p-values for id 1095.
1 of 2 done.
Getting list of correlations for id 6117.
Getting list of p-values for id 6117.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.219 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	207339_s_at	203729_at	NM_001425	EMP3	0.751970	1.670663e-16	7.724143e-12	7.724143e-12
2	207339_s_at	218681_s_at	NM_022044	SDF2L1	0.751514	1.783253e-16	8.244690e-12	4.122345e-12
3	207339_s_at	203391_at	NM_004470	FKBP2	0.732200	2.497401e-15	1.154648e-10	3.848828e-11
4	207339_s_at	211787_s_at	BC006210	EIF4A1	0.732079	2.537067e-15	1.172988e-10	2.932469e-11
5	207339_s_at	201970_s_at	NM_002482	NASP	0.731494	2.738244e-15	1.266000e-10	2.531999e-11
6	207339_s_at	226011_at	BG107767	CCDC12	0.730953	2.938250e-15	1.358471e-10	2.264118e-11
7	207339_s_at	200735_x_at	NM_005594	NACA	0.726816	5.006734e-15	2.314813e-10	3.306876e-11
8	207339_s_at	200595_s_at	NM_003750	EIF3A	-0.724536	6.688215e-15	3.092229e-10	3.865287e-11
9	207339_s_at	207132_x_at	NM_002624	PFDN5	0.716628	1.786456e-14	8.259502e-10	9.177225e-11
10	207339_s_at	203832_at	NM_003095	SNRPF	0.712293	3.018737e-14	1.395683e-9	1.395683e-10
11	207339_s_at	201954_at	NM_005720	ARPC1B	0.709180	4.373767e-14	2.022167e-9	1.838334e-10
12	207339_s_at	208635_x_at	BF976260	NACA	0.707884	5.096672e-14	2.356395e-9	1.963663e-10
13	207339_s_at	201544_x_at	BF675004	PABPN1	0.707634	5.249092e-14	2.426865e-9	1.866820e-10
14	207339_s_at	203103_s_at	NM_014502	PRPF19	0.706670	5.877356e-14	2.717337e-9	1.940955e-10
15	207339_s_at	206571_s_at	NM_004834	MAP4K4	0.706269	6.159739e-14	2.847894e-9	1.898596e-10
16	207339_s_at	210908_s_at	AB055804	PFDN5	0.705737	6.554737e-14	3.030517e-9	1.894073e-10
17	207339_s_at	218459_at	NM_022371	TOR3A	0.703771	8.236512e-14	3.808069e-9	2.240041e-10
18	207339_s_at	208666_s_at	BE866412	ST13	-0.702631	9.395300e-14	4.343823e-9	2.413235e-10
19	207339_s_at	202596_at	BC000436	ENSA	0.700998	1.133092e-13	5.238738e-9	2.757231e-10
20	207339_s_at	200019_s_at	NM_001997	FAU	0.694510	2.356809e-13	1.089647e-8	5.448234e-10
21	207339_s_at	201153_s_at	NM_021038	MBNL1	-0.693764	2.560713e-13	1.183920e-8	5.637715e-10
22	207339_s_at	208206_s_at	NM_005825	RASGRP2	0.693595	2.609218e-13	1.206346e-8	5.483389e-10
23	207339_s_at	200959_at	NM_004960	FUS	0.692960	2.799484e-13	1.294314e-8	5.627450e-10
24	207339_s_at	201018_at	AL079283	EIF1AX	-0.692424	2.970520e-13	1.373390e-8	5.722459e-10
25	207339_s_at	224782_at	AA205643	ZMAT2	0.692178	3.052258e-13	1.411181e-8	5.644724e-10
26	207339_s_at	203047_at	NM_005990	STK10	0.691657	3.232573e-13	1.494548e-8	5.748261e-10
27	207339_s_at	208841_s_at	AB014560	G3BP2	-0.690692	3.594317e-13	1.661796e-8	6.154801e-10
28	207339_s_at	208757_at	BC001123	TMED9	0.688847	4.397164e-13	2.032985e-8	7.260661e-10
29	207339_s_at	212697_at	AL515874	FAM134C	0.685148	6.558237e-13	3.032135e-8	1.045564e-9
30	207339_s_at	202858_at	NM_006758	U2AF1	0.683124	8.141376e-13	3.764084e-8	1.254695e-9
31	207339_s_at	202726_at	NM_000234	LIG1	0.682528	8.674236e-13	4.010446e-8	1.293692e-9
32	207339_s_at	200819_s_at	NM_001018	RPS15	0.681995	9.178873e-13	4.243760e-8	1.326175e-9
33	207339_s_at	225870_s_at	BF569208	TRAPPC5	0.681415	9.759566e-13	4.512238e-8	1.367345e-9
34	207339_s_at	228910_at	AI870617		0.680952	1.024846e-12	4.738274e-8	1.393610e-9
35	207339_s_at	206687_s_at	NM_002831	PTPN6	0.679787	1.158555e-12	5.356465e-8	1.530418e-9
36	207339_s_at	201177_s_at	NM_005499	UBA2	-0.677337	1.496686e-12	6.919779e-8	1.922161e-9
37	207339_s_at	228879_at	BG502554	SNORD104	0.675251	1.857818e-12	8.589436e-8	2.321469e-9
38	207339_s_at	41220_at	AB023208	SEPT9	0.674170	2.076527e-12	9.600614e-8	2.526477e-9
39	207339_s_at	227279_at	AA847654	TCEAL3	0.674004	2.112248e-12	9.765769e-8	2.504043e-9
40	207339_s_at	201827_at	AF113019	SMARCD2	0.673924	2.129740e-12	9.846642e-8	2.461660e-9
41	207339_s_at	209734_at	BC001604	NCKAP1L	0.673616	2.198011e-12	1.016229e-7	2.478606e-9
42	207339_s_at	203113_s_at	NM_001960	EEF1D	0.673428	2.240964e-12	1.036087e-7	2.466874e-9
43	207339_s_at	217747_s_at	NM_001013	RPS9	0.673012	2.338308e-12	1.081093e-7	2.514170e-9
44	207339_s_at	205644_s_at	NM_003096	SNRPG	0.671398	2.756825e-12	1.274591e-7	2.896797e-9
45	207339_s_at	205812_s_at	NM_006588		0.671274	2.791762e-12	1.290743e-7	2.868318e-9
46	207339_s_at	202416_at	NM_003315	DNAJC7	0.670889	2.903042e-12	1.342192e-7	2.917810e-9
47	207339_s_at	202857_at	NM_014255	CNPY2	0.670694	2.961080e-12	1.369026e-7	2.912821e-9
48	207339_s_at	233849_s_at	AK023014	ARHGAP5	-0.670536	3.008861e-12	1.391117e-7	2.898160e-9
49	207339_s_at	217731_s_at	NM_021999	ITM2B	-0.669668	3.284921e-12	1.518750e-7	3.099490e-9
50	207339_s_at	225497_at	AL589591	ATE1	-0.668989	3.517830e-12	1.626434e-7	3.252867e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation