[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
12091	218979_at	NM_024945	RMI1		RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)

Fetching correlation data, please wait...
Getting list of correlations for id 12091.
Getting list of p-values for id 12091.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.142 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	218979_at	214047_s_at	AI913365	MBD4	0.777963	3.160214e-18	7.305466e-14	7.305466e-14
2	218979_at	227346_at	AI741188	IKZF1	0.770134	1.102445e-17	2.548521e-13	1.274261e-13
3	218979_at	203209_at	BC001866	RFC5	0.736326	1.448761e-15	3.349102e-11	1.116367e-11
4	218979_at	202413_s_at	NM_003368	USP1	0.735561	1.603889e-15	3.707710e-11	9.269275e-12
5	218979_at	200069_at	AI656011	SART3	0.728910	3.827524e-15	8.848087e-11	1.769617e-11
6	218979_at	212766_s_at	AW294587	ISG20L2	0.725610	5.837278e-15	1.349404e-10	2.249006e-11
7	218979_at	203344_s_at	NM_002894	RBBP8	0.703144	8.855034e-14	2.047018e-9	2.924312e-10
8	218979_at	225716_at	AI357639		0.701776	1.036526e-13	2.396137e-9	2.995172e-10
9	218979_at	227350_at	AI889959	HELLS	0.700940	1.140625e-13	2.636783e-9	2.929759e-10
10	218979_at	212919_at	AV715578	DCP2	0.696888	1.806137e-13	4.175246e-9	4.175246e-10
11	218979_at	203487_s_at	NM_015396	ARMC8	0.695326	2.151724e-13	4.974139e-9	4.521945e-10
12	218979_at	201515_s_at	NM_004622	TSN	0.693375	2.673800e-13	6.181023e-9	5.150852e-10
13	218979_at	204566_at	NM_003620	PPM1D	0.690803	3.550688e-13	8.208126e-9	6.313943e-10
14	218979_at	213021_at	AI741876	GOSR1	0.687132	5.296204e-13	1.224324e-8	8.745168e-10
15	218979_at	225040_s_at	AV699857	RPE	0.684975	6.681094e-13	1.544468e-8	1.029646e-9
16	218979_at	224656_s_at	AL533334		0.681017	1.017911e-12	2.353105e-8	1.470691e-9
17	218979_at	209572_s_at	AF080227	EED	0.679823	1.154188e-12	2.668136e-8	1.569492e-9
18	218979_at	212037_at	BF508848	PNN	0.676785	1.585154e-12	3.664401e-8	2.035778e-9
19	218979_at	1558097_at	W21283		0.674053	2.101701e-12	4.858501e-8	2.557106e-9
20	218979_at	202603_at	N51370		0.670459	3.032209e-12	7.009557e-8	3.504779e-9
21	218979_at	226242_at	BF515750	C1orf131	0.667825	3.954154e-12	9.140818e-8	4.352770e-9
22	218979_at	204618_s_at	NM_005254	GABPB1	0.666539	4.497078e-12	1.039590e-7	4.725407e-9
23	218979_at	225416_at	N58188	RLIM	0.664527	5.492267e-12	1.269647e-7	5.520206e-9
24	218979_at	229551_x_at	N62196	ZNF367	0.663922	5.830947e-12	1.347940e-7	5.616417e-9
25	218979_at	238004_at	BF344017	PGBD2	0.663017	6.375173e-12	1.473749e-7	5.894995e-9
26	218979_at	203654_s_at	NM_004645	COIL	0.662623	6.627681e-12	1.532121e-7	5.892773e-9
27	218979_at	204127_at	BC000149	RFC3	0.659135	9.316599e-12	2.153718e-7	7.976734e-9
28	218979_at	219083_at	NM_018130	SHQ1	0.658234	1.016593e-11	2.350058e-7	8.393064e-9
29	218979_at	208672_s_at	BC000914	SRSF3	0.657295	1.113083e-11	2.573114e-7	8.872806e-9
30	218979_at	203743_s_at	NM_003211	TDG	0.656913	1.154780e-11	2.669504e-7	8.898348e-9
31	218979_at	206003_at	NM_014645	CEP135	0.655810	1.283772e-11	2.967695e-7	9.573209e-9
32	218979_at	225612_s_at	BE672260	B3GNT5	0.655226	1.357517e-11	3.138172e-7	9.806789e-9
33	218979_at	218542_at	NM_018131	CEP55	0.653202	1.646220e-11	3.805566e-7	1.153202e-8
34	218979_at	227025_at	BG284497	PPHLN1	0.652481	1.762568e-11	4.074529e-7	1.198391e-8
35	218979_at	218514_at	NM_018149	C17orf71	0.650789	2.067503e-11	4.779446e-7	1.365556e-8
36	218979_at	225366_at	AI652855	PGM2	0.650374	2.149702e-11	4.969465e-7	1.380407e-8
37	218979_at	204662_at	NM_014711	CP110	0.649833	2.261566e-11	5.228062e-7	1.412990e-8
38	218979_at	200893_at	NM_004593	TRA2B	0.649646	2.301554e-11	5.320501e-7	1.400132e-8
39	218979_at	202521_at	NM_006565	CTCF	0.647521	2.806123e-11	6.486915e-7	1.663311e-8
40	218979_at	228033_at	AI341146	E2F7	0.647232	2.882456e-11	6.663373e-7	1.665843e-8
41	218979_at	217970_s_at	NM_015455	CNOT6	0.642955	4.273426e-11	9.878879e-7	2.409483e-8
42	218979_at	212474_at	D87682	AVL9	0.642871	4.306281e-11	9.954831e-7	2.370198e-8
43	218979_at	213356_x_at	AL568186		0.638471	6.415247e-11	1.483013e-6	3.448866e-8
44	218979_at	202777_at	NM_007373	SHOC2	0.635948	8.039698e-11	1.858537e-6	4.223948e-8
45	218979_at	225136_at	BF968578	PLEKHA2	0.635872	8.094104e-11	1.871114e-6	4.158031e-8
46	218979_at	218313_s_at	NM_017423	GALNT7	0.634731	8.957189e-11	2.070633e-6	4.501377e-8
47	218979_at	218370_s_at	NM_022753	S100PBP	0.634574	9.082702e-11	2.099648e-6	4.467337e-8
48	218979_at	207830_s_at	NM_002713	PPP1R8	0.634558	9.095637e-11	2.102639e-6	4.380497e-8
49	218979_at	217916_s_at	NM_016623	FAM49B	0.634443	9.188595e-11	2.124128e-6	4.334954e-8
50	218979_at	212825_at	AI357401	PAXIP1	0.634391	9.231681e-11	2.134088e-6	4.268175e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation