[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
User requested variable id 5621.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5621	7997032	NM_001011880	CLEC18B		C-type lectin domain family 18, member B

Fetching correlation data, please wait...
Getting list of correlations for id 5621.
Getting list of p-values for id 5621.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.092 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7997032	8002713	NM_001011880	CLEC18B	0.990167	8.219273e-90	1.424153e-85	1.424153e-85
2	7997032	7997010	NM_182619	CLEC18A	0.886562	2.902591e-36	5.029319e-32	2.514659e-32
3	7997032	7947138	NM_022725	FANCF	-0.710595	2.058379e-17	3.566553e-13	1.188851e-13
4	7997032	8162313	NM_013417	IARS	-0.699062	1.104250e-16	1.913335e-12	4.783337e-13
5	7997032	8046306	NM_015530	GORASP2	-0.671067	4.764144e-15	8.254833e-11	1.650967e-11
6	7997032	8162850	NM_017746	TEX10	-0.668252	6.801756e-15	1.178540e-10	1.964234e-11
7	7997032	7931081	NM_021622	PLEKHA1	-0.664134	1.137302e-14	1.970603e-10	2.815147e-11
8	7997032	7972003	NM_007249	KLF12	-0.661308	1.610728e-14	2.790909e-10	3.488636e-11
9	7997032	8099570	BC050697	DCAF16	-0.658305	2.322137e-14	4.023567e-10	4.470631e-11
10	7997032	8047641	NM_177538	CYP20A1	-0.651434	5.280602e-14	9.149699e-10	9.149699e-11
11	7997032	8142912	NM_032842	TMEM209	-0.646854	9.025692e-14	1.563882e-9	1.421711e-10
12	7997032	8111286	NM_013235	RNASEN	-0.644349	1.205354e-13	2.088517e-9	1.740431e-10
13	7997032	8059319	NM_005687	FARSB	-0.643042	1.400407e-13	2.426486e-9	1.866528e-10
14	7997032	8107282	NM_139281	WDR36	-0.642389	1.508824e-13	2.614340e-9	1.867385e-10
15	7997032	7903393	NM_001400	S1PR1	-0.639977	1.984604e-13	3.438723e-9	2.292482e-10
16	7997032	7925364	NM_018072	HEATR1	-0.638311	2.394832e-13	4.149525e-9	2.593453e-10
17	7997032	7915995	NM_007051	FAF1	-0.637999	2.480416e-13	4.297816e-9	2.528127e-10
18	7997032	8078600	NM_006756	TCEA1	-0.637685	2.569261e-13	4.451758e-9	2.473199e-10
19	7997032	8172307	NM_007130	ZNF41	-0.637224	2.705553e-13	4.687912e-9	2.467322e-10
20	7997032	7917359	NM_017953	ZNHIT6	-0.636618	2.895380e-13	5.016826e-9	2.508413e-10
21	7997032	8103979	NM_020827	KIAA1430	-0.636612	2.897434e-13	5.020384e-9	2.390659e-10
22	7997032	7965812	NM_024312	GNPTAB	-0.636239	3.020779e-13	5.234104e-9	2.379138e-10
23	7997032	8145922	NM_015214	DDHD2	-0.635920	3.130090e-13	5.423507e-9	2.358047e-10
24	7997032	8103106	NM_006726	LRBA	-0.635539	3.265639e-13	5.658372e-9	2.357655e-10
25	7997032	8116402	NM_139068	MAPK9	-0.634693	3.587855e-13	6.216676e-9	2.486671e-10
26	7997032	8160332	NM_004529	MLLT3	-0.634518	3.658201e-13	6.338565e-9	2.437910e-10
27	7997032	8116724	NM_006567	FARS2	-0.633847	3.940156e-13	6.827109e-9	2.528559e-10
28	7997032	8014891	NM_012481	IKZF3	-0.628899	6.779043e-13	1.174605e-8	4.195017e-10
29	7997032	8166184	NM_007220	CA5B	-0.628229	7.290284e-13	1.263188e-8	4.355819e-10
30	7997032	8066303	NM_032221	CHD6	-0.628161	7.344627e-13	1.272603e-8	4.242012e-10
31	7997032	8111629	NM_153485	NUP155	-0.625410	9.881216e-13	1.712118e-8	5.522962e-10
32	7997032	8043251	NM_017952	PTCD3	-0.625345	9.950739e-13	1.724165e-8	5.388014e-10
33	7997032	7925531	NM_181690	AKT3	-0.623510	1.210762e-12	2.097887e-8	6.357233e-10
34	7997032	8156263	NM_006717	SPIN1	-0.621079	1.567278e-12	2.715623e-8	7.987127e-10
35	7997032	7927955	NM_015634	KIAA1279	-0.620621	1.644843e-12	2.850020e-8	8.142915e-10
36	7997032	7985044	NM_173469	UBE2Q2	-0.619776	1.798095e-12	3.115558e-8	8.654329e-10
37	7997032	8136401	NM_015135	NUP205	-0.617989	2.168583e-12	3.757504e-8	1.015542e-9
38	7997032	8050367	NM_015909	NBAS	-0.617551	2.270216e-12	3.933603e-8	1.035159e-9
39	7997032	8027439	NM_001136156	ZNF507	-0.617263	2.339328e-12	4.053354e-8	1.039322e-9
40	7997032	8175420	NM_002139	RBMX	-0.616989	2.407083e-12	4.170752e-8	1.042688e-9
41	7997032	8044849	NM_002830	PTPN4	-0.616230	2.604815e-12	4.513363e-8	1.100820e-9
42	7997032	8111892	NM_000436	OXCT1	-0.615627	2.772940e-12	4.804673e-8	1.143970e-9
43	7997032	8170971	NM_001363	DKC1	-0.615252	2.883008e-12	4.995388e-8	1.161718e-9
44	7997032	8081564	NM_198196	CD96	-0.614652	3.067307e-12	5.314722e-8	1.207891e-9
45	7997032	8027416	NM_003796	C19orf2	-0.614138	3.234605e-12	5.604600e-8	1.245467e-9
46	7997032	8068522	NM_003316	TTC3	-0.613609	3.415719e-12	5.918417e-8	1.286612e-9
47	7997032	8059413	NM_014689	DOCK10	-0.613475	3.462937e-12	6.000230e-8	1.276645e-9
48	7997032	7916443	NM_015306	USP24	-0.612822	3.703541e-12	6.417125e-8	1.336901e-9
49	7997032	8092095	NM_015028	TNIK	-0.612547	3.809227e-12	6.600248e-8	1.346989e-9
50	7997032	7953878	NM_001004419	CLEC2D	-0.612293	3.909857e-12	6.774609e-8	1.354922e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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