[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id Label1 AccNum GeneSym Info Gene Name
3847 8002713 NM_001011880 CLEC18B link to infopage C-type lectin domain family 18, member B
5621 7997032 NM_001011880 CLEC18B link to infopage C-type lectin domain family 18, member B

Fetching correlation data, please wait...
Getting list of correlations for id 3847.
Getting list of p-values for id 3847.
1 of 2 done.
Getting list of correlations for id 5621.
Getting list of p-values for id 5621.
2 of 2 done.
Calculating corrections for multiple testing (n=34654), please wait...
Done; whole program took 0.215 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8002713 7997032 NM_001011880 CLEC18B link to infopage 0.990167 8.219273e-90 2.848307e-85 2.848307e-85
2 7997032 8002713 NM_001011880 CLEC18B link to infopage 0.990167 8.219273e-90 2.848307e-85 1.424153e-85
3 7997032 7997010 NM_182619 CLEC18A link to infopage 0.886562 2.902591e-36 1.005864e-31 3.352879e-32
4 8002713 7997010 NM_182619 CLEC18A link to infopage 0.882599 1.533420e-35 5.313913e-31 1.328478e-31
5 7997032 7947138 NM_022725 FANCF link to infopage -0.710595 2.058379e-17 7.133107e-13 1.426621e-13
6 8002713 8162313 NM_013417 IARS link to infopage -0.702589 6.663073e-17 2.309021e-12 3.848369e-13
7 7997032 8162313 NM_013417 IARS link to infopage -0.699062 1.104250e-16 3.826670e-12 5.466671e-13
8 8002713 7947138 NM_022725 FANCF link to infopage -0.695911 1.723446e-16 5.972431e-12 7.465539e-13
9 8002713 8046306 NM_015530 GORASP2 link to infopage -0.678677 1.783972e-15 6.182177e-11 6.869085e-12
10 8002713 8162850 NM_017746 TEX10 link to infopage -0.671576 4.465642e-15 1.547523e-10 1.547523e-11
11 7997032 8046306 NM_015530 GORASP2 link to infopage -0.671067 4.764144e-15 1.650967e-10 1.500879e-11
12 7997032 8162850 NM_017746 TEX10 link to infopage -0.668252 6.801756e-15 2.357080e-10 1.964234e-11
13 8002713 7931081 NM_021622 PLEKHA1 link to infopage -0.666605 8.362869e-15 2.898069e-10 2.229283e-11
14 7997032 7931081 NM_021622 PLEKHA1 link to infopage -0.664134 1.137302e-14 3.941206e-10 2.815147e-11
15 7997032 7972003 NM_007249 KLF12 link to infopage -0.661308 1.610728e-14 5.581817e-10 3.721211e-11
16 7997032 8099570 BC050697 DCAF16 link to infopage -0.658305 2.322137e-14 8.047135e-10 5.029459e-11
17 8002713 7972003 NM_007249 KLF12 link to infopage -0.657902 2.438302e-14 8.449692e-10 4.970407e-11
18 8002713 8047641 NM_177538 CYP20A1 link to infopage -0.655931 3.091963e-14 1.071489e-9 5.952716e-11
19 7997032 8047641 NM_177538 CYP20A1 link to infopage -0.651434 5.280602e-14 1.829940e-9 9.631262e-11
20 8002713 8116724 NM_006567 FARS2 link to infopage -0.647626 8.250972e-14 2.859292e-9 1.429646e-10
21 7997032 8142912 NM_032842 TMEM209 link to infopage -0.646854 9.025692e-14 3.127763e-9 1.489411e-10
22 8002713 8059319 NM_005687 FARSB link to infopage -0.645372 1.071383e-13 3.712772e-9 1.687624e-10
23 8002713 8111286 NM_013235 RNASEN link to infopage -0.644748 1.151251e-13 3.989545e-9 1.734585e-10
24 8002713 8099570 BC050697 DCAF16 link to infopage -0.644380 1.201147e-13 4.162456e-9 1.734357e-10
25 7997032 8111286 NM_013235 RNASEN link to infopage -0.644349 1.205354e-13 4.177035e-9 1.670814e-10
26 7997032 8059319 NM_005687 FARSB link to infopage -0.643042 1.400407e-13 4.852972e-9 1.866528e-10
27 7997032 8107282 NM_139281 WDR36 link to infopage -0.642389 1.508824e-13 5.228679e-9 1.936548e-10
28 8002713 8103106 NM_006726 LRBA link to infopage -0.641672 1.637334e-13 5.674018e-9 2.026435e-10
29 8002713 8142912 NM_032842 TMEM209 link to infopage -0.640986 1.770230e-13 6.134556e-9 2.115364e-10
30 7997032 7903393 NM_001400 S1PR1 link to infopage -0.639977 1.984604e-13 6.877445e-9 2.292482e-10
31 8002713 8107282 NM_139281 WDR36 link to infopage -0.639425 2.112323e-13 7.320043e-9 2.361304e-10
32 8002713 7925364 NM_018072 HEATR1 link to infopage -0.638829 2.259241e-13 7.829174e-9 2.446617e-10
33 7997032 7925364 NM_018072 HEATR1 link to infopage -0.638311 2.394832e-13 8.299051e-9 2.514864e-10
34 7997032 7915995 NM_007051 FAF1 link to infopage -0.637999 2.480416e-13 8.595632e-9 2.528127e-10
35 8002713 7917359 NM_017953 ZNHIT6 link to infopage -0.637792 2.538706e-13 8.797632e-9 2.513609e-10
36 7997032 8078600 NM_006756 TCEA1 link to infopage -0.637685 2.569261e-13 8.903517e-9 2.473199e-10
37 8002713 7965812 NM_024312 GNPTAB link to infopage -0.637602 2.593425e-13 8.987255e-9 2.428988e-10
38 7997032 8172307 NM_007130 ZNF41 link to infopage -0.637224 2.705553e-13 9.375824e-9 2.467322e-10
39 8002713 8014891 NM_012481 IKZF3 link to infopage -0.636830 2.827486e-13 9.798371e-9 2.512403e-10
40 7997032 7917359 NM_017953 ZNHIT6 link to infopage -0.636618 2.895380e-13 1.003365e-8 2.508413e-10
41 7997032 8103979 NM_020827 KIAA1430 link to infopage -0.636612 2.897434e-13 1.004077e-8 2.448968e-10
42 7997032 7965812 NM_024312 GNPTAB link to infopage -0.636239 3.020779e-13 1.046821e-8 2.492430e-10
43 7997032 8145922 NM_015214 DDHD2 link to infopage -0.635920 3.130090e-13 1.084701e-8 2.522561e-10
44 8002713 8043251 NM_017952 PTCD3 link to infopage -0.635687 3.212300e-13 1.113191e-8 2.529979e-10
45 7997032 8103106 NM_006726 LRBA link to infopage -0.635539 3.265639e-13 1.131674e-8 2.514832e-10
46 8002713 7915995 NM_007051 FAF1 link to infopage -0.635398 3.317407e-13 1.149614e-8 2.499161e-10
47 7997032 8116402 NM_139068 MAPK9 link to infopage -0.634693 3.587855e-13 1.243335e-8 2.645394e-10
48 8002713 8145922 NM_015214 DDHD2 link to infopage -0.634553 3.643814e-13 1.262727e-8 2.630682e-10
49 7997032 8160332 NM_004529 MLLT3 link to infopage -0.634518 3.658201e-13 1.267713e-8 2.587169e-10
50 7997032 8116724 NM_006567 FARS2 link to infopage -0.633847 3.940156e-13 1.365422e-8 2.730843e-10

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!