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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 7178.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
7178 8176667 ENST00000391106 link to infopage

Fetching correlation data, please wait...
Getting list of correlations for id 7178.
Getting list of p-values for id 7178.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.124 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8176667 8177191 ENST00000391106 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8176667 8067506 BC137326 C20orf151 link to infopage 0.735227 4.260350e-19 7.381909e-15 3.690954e-15
3 8176667 8136401 NM_015135 NUP205 link to infopage -0.724929 2.268095e-18 3.929928e-14 1.309976e-14
4 8176667 8125568 NM_080680 COL11A2 link to infopage 0.710070 2.225880e-17 3.856783e-13 9.641958e-14
5 8176667 8086985 NM_000094 COL7A1 link to infopage 0.709606 2.384829e-17 4.132194e-13 8.264387e-14
6 8176667 7918869 NM_002506 NGF link to infopage 0.703609 5.749132e-17 9.961520e-13 1.660253e-13
7 8176667 8108435 NM_181838 UBE2D2 link to infopage -0.703177 6.120407e-17 1.060483e-12 1.514976e-13
8 8176667 7899957 NM_005095 ZMYM4 link to infopage -0.701861 7.399621e-17 1.282132e-12 1.602665e-13
9 8176667 7987701 NM_016642 SPTBN5 link to infopage 0.699764 9.992583e-17 1.731415e-12 1.923794e-13
10 8176667 8066451 NM_182970 RIMS4 link to infopage 0.698911 1.128134e-16 1.954718e-12 1.954718e-13
11 8176667 8087271 NM_017730 QRICH1 link to infopage -0.696534 1.578891e-16 2.735745e-12 2.487041e-13
12 8176667 8116195 NM_173465 COL23A1 link to infopage 0.695059 1.942050e-16 3.364990e-12 2.804158e-13
13 8176667 8096538 NM_001100426 RAP1GDS1 link to infopage -0.693196 2.517609e-16 4.362261e-12 3.355585e-13
14 8176667 7945688 NR_003512 INS-IGF2 link to infopage 0.690669 3.569627e-16 6.185093e-12 4.417924e-13
15 8176667 8115691 NM_003062 SLIT3 link to infopage 0.688036 5.115689e-16 8.863954e-12 5.909302e-13
16 8176667 8045030 NM_001080527 MYO7B link to infopage 0.687773 5.301702e-16 9.186259e-12 5.741412e-13
17 8176667 8162998 ENST00000452046 link to infopage 0.687031 5.863175e-16 1.015912e-11 5.975955e-13
18 8176667 8007537 NM_145273 CD300LG link to infopage 0.684344 8.420272e-16 1.458980e-11 8.105447e-13
19 8176667 8124868 NM_001105564 CCHCR1 link to infopage 0.683821 9.031121e-16 1.564822e-11 8.235907e-13
20 8176667 8083523 NM_003875 GMPS link to infopage -0.683476 9.457357e-16 1.638676e-11 8.193382e-13
21 8176667 8019331 NM_001145113 MYADML2 link to infopage 0.683217 9.789657e-16 1.696254e-11 8.077399e-13
22 8176667 7982267 ENST00000459113 link to infopage 0.680295 1.442245e-15 2.498978e-11 1.135899e-12
23 8176667 7937728 NM_001145829 TNNI2 link to infopage 0.679689 1.562077e-15 2.706610e-11 1.176787e-12
24 8176667 7897132 NM_022114 PRDM16 link to infopage 0.679334 1.636702e-15 2.835914e-11 1.181631e-12
25 8176667 7947991 NM_015231 NUP160 link to infopage -0.677484 2.085145e-15 3.612930e-11 1.445172e-12
26 8176667 8025126 NM_144614 MBD3L2 link to infopage 0.677350 2.121756e-15 3.676367e-11 1.413987e-12
27 8176667 8030582 NM_001145809 MYH14 link to infopage 0.674373 3.120534e-15 5.406950e-11 2.002574e-12
28 8176667 8066393 NM_020433 JPH2 link to infopage 0.673596 3.448523e-15 5.975256e-11 2.134020e-12
29 8176667 7982356 ENST00000459113 link to infopage 0.673082 3.683788e-15 6.382900e-11 2.201000e-12
30 8176667 7987137 ENST00000459113 link to infopage 0.673082 3.683788e-15 6.382900e-11 2.127633e-12
31 8176667 7987046 ENST00000459113 link to infopage 0.673082 3.683788e-15 6.382900e-11 2.059000e-12
32 8176667 7929664 NM_138413 DHDPSL link to infopage 0.672386 4.026944e-15 6.977487e-11 2.180465e-12
33 8176667 8051882 NM_133259 LRPPRC link to infopage -0.672158 4.145949e-15 7.183687e-11 2.176875e-12
34 8176667 8011912 NM_014336 AIPL1 link to infopage 0.671766 4.358552e-15 7.552063e-11 2.221195e-12
35 8176667 7897257 NM_207396 RNF207 link to infopage 0.670678 5.005974e-15 8.673851e-11 2.478243e-12
36 8176667 8165890 NM_001001888 VCX3B link to infopage 0.670504 5.117361e-15 8.866852e-11 2.463014e-12
37 8176667 7939434 NM_018259 TTC17 link to infopage -0.670309 5.245894e-15 9.089561e-11 2.456638e-12
38 8176667 8090639 NM_014602 PIK3R4 link to infopage -0.670289 5.259144e-15 9.112519e-11 2.398031e-12
39 8176667 8049729 NM_198998 AQP12A link to infopage 0.670107 5.381606e-15 9.324709e-11 2.390951e-12
40 8176667 7977418 NM_001134875 C14orf80 link to infopage 0.669429 5.863656e-15 1.015996e-10 2.539989e-12
41 8176667 8051204 NM_014860 SUPT7L link to infopage -0.669202 6.034262e-15 1.045557e-10 2.550138e-12
42 8176667 7967473 NM_001414 EIF2B1 link to infopage -0.668501 6.592189e-15 1.142229e-10 2.719592e-12
43 8176667 8157383 NM_032888 COL27A1 link to infopage 0.668333 6.733304e-15 1.166680e-10 2.713208e-12
44 8176667 8178448 NM_001105564 CCHCR1 link to infopage 0.668152 6.887926e-15 1.193471e-10 2.712434e-12
45 8176667 8159808 NM_207305 FOXD4 link to infopage 0.667690 7.299755e-15 1.264828e-10 2.810730e-12
46 8176667 7937560 NM_002457 MUC2 link to infopage 0.667517 7.460565e-15 1.292692e-10 2.810200e-12
47 8176667 7995007 NM_025193 HSD3B7 link to infopage 0.667301 7.664946e-15 1.328105e-10 2.825756e-12
48 8176667 8014269 NM_139285 GAS2L2 link to infopage 0.665670 9.397197e-15 1.628252e-10 3.392192e-12
49 8176667 8032312 NM_138813 ATP8B3 link to infopage 0.665182 9.985824e-15 1.730244e-10 3.531110e-12
50 8176667 8001014 NM_173502 PRSS36 link to infopage 0.664740 1.054999e-14 1.827997e-10 3.655994e-12

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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