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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 7514.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
7514 8171052 NR_024033 IL9R link to infopage interleukin 9 receptor

Fetching correlation data, please wait...
Getting list of correlations for id 7514.
Getting list of p-values for id 7514.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.102 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8171052 8176972 NR_024033 IL9R link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8171052 7933310 ENST00000319426 link to infopage 0.806098 3.300481e-25 5.718743e-21 2.859371e-21
3 8171052 8074131 NM_001080420 SHANK3 link to infopage 0.792794 6.989442e-24 1.211061e-19 4.036869e-20
4 8171052 8013259 ENST00000300983 link to infopage 0.791791 8.719021e-24 1.510745e-19 3.776862e-20
5 8171052 7897860 NM_001243 TNFRSF8 link to infopage 0.790269 1.216553e-23 2.107921e-19 4.215843e-20
6 8171052 8049670 NM_002081 GPC1 link to infopage 0.782136 6.896383e-23 1.194936e-18 1.991561e-19
7 8171052 7995193 NM_024742 ARMC5 link to infopage 0.778578 1.439416e-22 2.494076e-18 3.562966e-19
8 8171052 8133372 NM_000501 ELN link to infopage 0.778127 1.578426e-22 2.734939e-18 3.418673e-19
9 8171052 8070771 NM_198691 KRTAP10-1 link to infopage 0.776184 2.343314e-22 4.060261e-18 4.511401e-19
10 8171052 7915385 NM_001956 EDN2 link to infopage 0.771492 5.987145e-22 1.037393e-17 1.037393e-18
11 8171052 8067409 NM_005560 LAMA5 link to infopage 0.771297 6.223289e-22 1.078309e-17 9.802811e-19
12 8171052 8159036 NM_139025 ADAMTS13 link to infopage 0.770367 7.472819e-22 1.294815e-17 1.079013e-18
13 8171052 8005328 NM_016239 MYO15A link to infopage 0.770171 7.767062e-22 1.345799e-17 1.035230e-18
14 8171052 8167652 AY730278 CENPVL1 link to infopage 0.767518 1.302658e-21 2.257116e-17 1.612225e-18
15 8171052 8172715 AY730278 CENPVL1 link to infopage 0.767518 1.302658e-21 2.257116e-17 1.504744e-18
16 8171052 8034940 NM_000435 NOTCH3 link to infopage 0.765778 1.821787e-21 3.156611e-17 1.972882e-18
17 8171052 7990928 ENST00000342039 link to infopage 0.763200 2.978956e-21 5.161637e-17 3.036257e-18
18 8171052 7985459 ENST00000342039 link to infopage 0.763200 2.978956e-21 5.161637e-17 2.867576e-18
19 8171052 7985418 ENST00000342039 link to infopage 0.763200 2.978956e-21 5.161637e-17 2.716651e-18
20 8171052 8137330 ENST00000356058 link to infopage 0.762838 3.190342e-21 5.527905e-17 2.763952e-18
21 8171052 8110237 NM_133369 UNC5A link to infopage 0.761630 4.007265e-21 6.943389e-17 3.306376e-18
22 8171052 7905020 NM_000798 DRD5 link to infopage 0.761379 4.200909e-21 7.278914e-17 3.308597e-18
23 8171052 8074063 NM_024866 ADM2 link to infopage 0.761093 4.432523e-21 7.680233e-17 3.339232e-18
24 8171052 8038362 NM_178449 PTH2 link to infopage 0.759273 6.227327e-21 1.079009e-16 4.495870e-18
25 8171052 8003560 NM_024043 DBNDD1 link to infopage 0.759256 6.246586e-21 1.082346e-16 4.329384e-18
26 8171052 8153101 NM_152888 COL22A1 link to infopage 0.758966 6.591893e-21 1.142177e-16 4.392989e-18
27 8171052 7927307 NM_001630 ANXA8L2 link to infopage 0.756960 9.549542e-21 1.654649e-16 6.128330e-18
28 8171052 8004152 NM_015253 WSCD1 link to infopage 0.756320 1.073969e-20 1.860866e-16 6.645949e-18
29 8171052 7928291 NM_004273 CHST3 link to infopage 0.755898 1.160428e-20 2.010673e-16 6.933356e-18
30 8171052 7937560 NM_002457 MUC2 link to infopage 0.753576 1.770213e-20 3.067247e-16 1.022416e-17
31 8171052 8049598 NM_194312 ESPNL link to infopage 0.753319 1.854378e-20 3.213081e-16 1.036478e-17
32 8171052 8031084 NM_031895 CACNG8 link to infopage 0.752509 2.146295e-20 3.718886e-16 1.162152e-17
33 8171052 8131056 NM_017781 CYP2W1 link to infopage 0.752162 2.284241e-20 3.957904e-16 1.199365e-17
34 8171052 8076169 NM_014293 NPTXR link to infopage 0.751818 2.429965e-20 4.210400e-16 1.238353e-17
35 8171052 8148703 NM_198572 SPATC1 link to infopage 0.751355 2.640231e-20 4.574728e-16 1.307065e-17
36 8171052 8018258 NM_173477 USH1G link to infopage 0.751332 2.651117e-20 4.593591e-16 1.275998e-17
37 8171052 7929932 NM_030929 KAZALD1 link to infopage 0.750503 3.074238e-20 5.326733e-16 1.439658e-17
38 8171052 8040792 NM_007046 EMILIN1 link to infopage 0.749951 3.391487e-20 5.876430e-16 1.546429e-17
39 8171052 8036252 NM_015526 CLIP3 link to infopage 0.749853 3.451159e-20 5.979823e-16 1.533288e-17
40 8171052 7896822 NM_198576 AGRN link to infopage 0.749811 3.477173e-20 6.024898e-16 1.506225e-17
41 8171052 8158671 NM_000050 ASS1 link to infopage 0.749524 3.658687e-20 6.339407e-16 1.546197e-17
42 8171052 7922590 AK125993 NCRNA00083 link to infopage 0.749494 3.678552e-20 6.373826e-16 1.517578e-17
43 8171052 7927367 NM_001040084 ANXA8 link to infopage 0.749221 3.860996e-20 6.689948e-16 1.555802e-17
44 8171052 7991939 NM_145294 WDR90 link to infopage 0.749100 3.944333e-20 6.834345e-16 1.553260e-17
45 8171052 8008723 NM_000502 EPX link to infopage 0.748452 4.423751e-20 7.665033e-16 1.703341e-17
46 8171052 7992758 NM_172229 KREMEN2 link to infopage 0.748027 4.767766e-20 8.261109e-16 1.795893e-17
47 8171052 7974047 NM_001049 SSTR1 link to infopage 0.747464 5.264339e-20 9.121519e-16 1.940749e-17
48 8171052 8150928 NM_003580 NSMAF link to infopage -0.746592 6.134509e-20 1.062926e-15 2.214430e-17
49 8171052 8038109 NM_017708 FAM83E link to infopage 0.746417 6.325577e-20 1.096033e-15 2.236802e-17
50 8171052 8046276 NM_001003845 SP5 link to infopage 0.746255 6.506714e-20 1.127418e-15 2.254837e-17

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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