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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 9046.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
9046 8178442 NM_001264 CDSN link to infopage corneodesmosin

Fetching correlation data, please wait...
Getting list of correlations for id 9046.
Getting list of p-values for id 9046.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.122 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8178442 8124862 NM_001264 CDSN link to infopage 0.985422 4.688677e-81 8.124070e-77 8.124070e-77
2 8178442 8179716 NM_001264 CDSN link to infopage 0.960105 8.160506e-59 1.413971e-54 7.069855e-55
3 8178442 7937560 NM_002457 MUC2 link to infopage 0.793644 5.789404e-24 1.003130e-19 3.343767e-20
4 8178442 8049942 NM_080741 NEU4 link to infopage 0.793503 5.973183e-24 1.034973e-19 2.587433e-20
5 8178442 7987701 NM_016642 SPTBN5 link to infopage 0.789833 1.337723e-23 2.317873e-19 4.635746e-20
6 8178442 8110821 NM_001044 SLC6A3 link to infopage 0.788047 1.969340e-23 3.412275e-19 5.687125e-20
7 8178442 8028407 NM_000540 RYR1 link to infopage 0.784604 4.105664e-23 7.113883e-19 1.016269e-19
8 8178442 8005328 NM_016239 MYO15A link to infopage 0.782330 6.622406e-23 1.147464e-18 1.434330e-19
9 8178442 8032465 NM_144616 JSRP1 link to infopage 0.776840 2.051652e-22 3.554898e-18 3.949887e-19
10 8178442 8136080 NM_005631 SMO link to infopage 0.772787 4.632066e-22 8.025981e-18 8.025981e-19
11 8178442 8114550 NM_004883 NRG2 link to infopage 0.771595 5.867584e-22 1.016676e-17 9.242511e-19
12 8178442 7914667 NM_052896 CSMD2 link to infopage 0.771424 6.068284e-22 1.051451e-17 8.762096e-19
13 8178442 8107406 ENST00000410774 link to infopage 0.771263 6.264379e-22 1.085429e-17 8.349453e-19
14 8178442 8067409 NM_005560 LAMA5 link to infopage 0.771087 6.485949e-22 1.123820e-17 8.027288e-19
15 8178442 8115691 NM_003062 SLIT3 link to infopage 0.769398 9.035159e-22 1.565522e-17 1.043681e-18
16 8178442 7898616 NM_022819 PLA2G2F link to infopage 0.768911 9.936957e-22 1.721776e-17 1.076110e-18
17 8178442 7984014 ENST00000391323 link to infopage 0.767703 1.256809e-21 2.177673e-17 1.280984e-18
18 8178442 8153838 NM_004260 RECQL4 link to infopage 0.767324 1.352597e-21 2.343645e-17 1.302025e-18
19 8178442 7935983 NM_005029 PITX3 link to infopage 0.767089 1.415409e-21 2.452479e-17 1.290778e-18
20 8178442 8079021 NM_001904 CTNNB1 link to infopage -0.765312 1.992037e-21 3.451603e-17 1.725802e-18
21 8178442 7942717 NM_000260 MYO7A link to infopage 0.764181 2.472621e-21 4.284310e-17 2.040148e-18
22 8178442 7935535 NM_018058 CRTAC1 link to infopage 0.764115 2.503672e-21 4.338112e-17 1.971869e-18
23 8178442 7897416 NM_001080397 SLC45A1 link to infopage 0.764075 2.523175e-21 4.371906e-17 1.900829e-18
24 8178442 8170716 NM_005393 PLXNB3 link to infopage 0.763371 2.883989e-21 4.997088e-17 2.082120e-18
25 8178442 8159670 NM_006647 NOXA1 link to infopage 0.762029 3.717128e-21 6.440668e-17 2.576267e-18
26 8178442 8096556 NM_015143 METAP1 link to infopage -0.761950 3.772680e-21 6.536923e-17 2.514201e-18
27 8178442 7945688 NR_003512 INS-IGF2 link to infopage 0.761637 4.002304e-21 6.934793e-17 2.568442e-18
28 8178442 8125568 NM_080680 COL11A2 link to infopage 0.761581 4.044168e-21 7.007329e-17 2.502618e-18
29 8178442 8064242 NR_027686 NCRNA00176 link to infopage 0.761295 4.267545e-21 7.394375e-17 2.549784e-18
30 8178442 8010287 NM_030968 C1QTNF1 link to infopage 0.760448 5.001400e-21 8.665927e-17 2.888642e-18
31 8178442 8064059 NM_020882 COL20A1 link to infopage 0.760402 5.044970e-21 8.741419e-17 2.819813e-18
32 8178442 7915257 NM_022120 OXCT2 link to infopage 0.759873 5.569136e-21 9.649641e-17 3.015513e-18
33 8178442 7900352 NM_022120 OXCT2 link to infopage 0.759873 5.569136e-21 9.649641e-17 2.924134e-18
34 8178442 7929664 NM_138413 DHDPSL link to infopage 0.759459 6.015277e-21 1.042267e-16 3.065492e-18
35 8178442 8032699 NM_015174 ZFR2 link to infopage 0.759053 6.486929e-21 1.123990e-16 3.211401e-18
36 8178442 8070482 NR_027272 C21orf129 link to infopage 0.758862 6.721186e-21 1.164580e-16 3.234944e-18
37 8178442 7896761 NM_152486 SAMD11 link to infopage 0.758644 6.998144e-21 1.212568e-16 3.277212e-18
38 8178442 7997801 NM_013278 IL17C link to infopage 0.757476 8.685245e-21 1.504892e-16 3.960243e-18
39 8178442 8116033 NM_000505 F12 link to infopage 0.757336 8.911935e-21 1.544171e-16 3.959413e-18
40 8178442 7955184 NM_006262 PRPH link to infopage 0.757276 9.010994e-21 1.561335e-16 3.903337e-18
41 8178442 7913226 NM_012400 PLA2G2D link to infopage 0.756913 9.633157e-21 1.669137e-16 4.071066e-18
42 8178442 8012344 NM_032580 HES7 link to infopage 0.756615 1.017524e-20 1.763064e-16 4.197771e-18
43 8178442 8062948 NM_014276 RBPJL link to infopage 0.756198 1.098271e-20 1.902974e-16 4.425522e-18
44 8178442 7988987 NM_004498 ONECUT1 link to infopage 0.756103 1.117626e-20 1.936510e-16 4.401158e-18
45 8178442 8138450 NM_152898 FERD3L link to infopage 0.755985 1.142118e-20 1.978947e-16 4.397660e-18
46 8178442 8001014 NM_173502 PRSS36 link to infopage 0.755518 1.243704e-20 2.154965e-16 4.684708e-18
47 8178442 8125072 NM_025258 C6orf27 link to infopage 0.755238 1.309077e-20 2.268238e-16 4.826039e-18
48 8178442 8061529 NM_014012 REM1 link to infopage 0.754200 1.580935e-20 2.739287e-16 5.706847e-18
49 8178442 8092888 NM_138399 TMEM44 link to infopage 0.751923 2.384534e-20 4.131682e-16 8.432005e-18
50 8178442 8153876 NM_025251 ARHGAP39 link to infopage 0.751599 2.527392e-20 4.379211e-16 8.758423e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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