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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
1049 7924987 NM_000029 AGT link to infopage angiotensinogen (serpin peptidase inhibitor, clade A, member 8)

Fetching correlation data, please wait...
Getting list of correlations for id 1049.
Getting list of p-values for id 1049.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.132 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7924987 8170716 NM_005393 PLXNB3 link to infopage 0.712240 1.608897e-17 2.787735e-13 2.787735e-13
2 7924987 7959234 NM_000545 HNF1A link to infopage 0.710755 2.009819e-17 3.482413e-13 1.741206e-13
3 7924987 7973709 NM_004554 NFATC4 link to infopage 0.708694 2.730230e-17 4.730670e-13 1.576890e-13
4 7924987 8008723 NM_000502 EPX link to infopage 0.707856 3.090185e-17 5.354364e-13 1.338591e-13
5 7924987 7963880 NM_001144996 ITGA7 link to infopage 0.706954 3.529136e-17 6.114935e-13 1.222987e-13
6 7924987 8110237 NM_133369 UNC5A link to infopage 0.701698 7.574786e-17 1.312483e-12 2.187472e-13
7 7924987 7966189 NM_213596 FOXN4 link to infopage 0.700425 9.091920e-17 1.575357e-12 2.250510e-13
8 7924987 8125568 NM_080680 COL11A2 link to infopage 0.699053 1.105604e-16 1.915680e-12 2.394600e-13
9 7924987 8059249 NM_015311 OBSL1 link to infopage 0.698529 1.191069e-16 2.063765e-12 2.293072e-13
10 7924987 7914667 NM_052896 CSMD2 link to infopage 0.698234 1.241914e-16 2.151865e-12 2.151865e-13
11 7924987 8176972 NR_024033 IL9R link to infopage 0.696719 1.538497e-16 2.665754e-12 2.423412e-13
12 7924987 8171052 NR_024033 IL9R link to infopage 0.696719 1.538497e-16 2.665754e-12 2.221461e-13
13 7924987 7987701 NM_016642 SPTBN5 link to infopage 0.695608 1.798379e-16 3.116052e-12 2.396963e-13
14 7924987 8014812 NM_198993 STAC2 link to infopage 0.693527 2.404691e-16 4.166608e-12 2.976149e-13
15 7924987 8033674 NM_024690 MUC16 link to infopage 0.692080 2.938646e-16 5.091792e-12 3.394528e-13
16 7924987 8086985 NM_000094 COL7A1 link to infopage 0.690803 3.504040e-16 6.071451e-12 3.794657e-13
17 7924987 7985418 ENST00000342039 link to infopage 0.690073 3.873830e-16 6.712185e-12 3.948344e-13
18 7924987 7985459 ENST00000342039 link to infopage 0.690073 3.873830e-16 6.712185e-12 3.728992e-13
19 7924987 7990928 ENST00000342039 link to infopage 0.690073 3.873830e-16 6.712185e-12 3.532729e-13
20 7924987 8150214 AK091697 link to infopage 0.689611 4.126985e-16 7.150827e-12 3.575413e-13
21 7924987 8034151 NM_020812 DOCK6 link to infopage 0.684703 8.024430e-16 1.390393e-11 6.620919e-13
22 7924987 8125072 NM_025258 C6orf27 link to infopage 0.683899 8.936932e-16 1.548502e-11 7.038647e-13
23 7924987 8090366 NM_144639 UROC1 link to infopage 0.682357 1.097757e-15 1.902083e-11 8.269925e-13
24 7924987 7898616 NM_022819 PLA2G2F link to infopage 0.682165 1.126048e-15 1.951103e-11 8.129595e-13
25 7924987 8059028 NM_194302 CCDC108 link to infopage 0.680886 1.333996e-15 2.311414e-11 9.245656e-13
26 7924987 7946860 NM_000352 ABCC8 link to infopage 0.679815 1.536365e-15 2.662060e-11 1.023869e-12
27 7924987 7977418 NM_001134875 C14orf80 link to infopage 0.679731 1.553407e-15 2.691589e-11 9.968848e-13
28 7924987 8025053 NM_003811 TNFSF9 link to infopage 0.678583 1.806126e-15 3.129474e-11 1.117669e-12
29 7924987 8043157 NM_198482 SH2D6 link to infopage 0.678551 1.813593e-15 3.142413e-11 1.083591e-12
30 7924987 7907549 NM_022093 TNN link to infopage 0.677908 1.972872e-15 3.418396e-11 1.139465e-12
31 7924987 8049509 NM_015893 PRLH link to infopage 0.677401 2.107687e-15 3.651990e-11 1.178061e-12
32 7924987 7913450 NM_005529 HSPG2 link to infopage 0.677150 2.177706e-15 3.773311e-11 1.179160e-12
33 7924987 7991893 BC016613 C16orf11 link to infopage 0.677072 2.200073e-15 3.812067e-11 1.155172e-12
34 7924987 8078971 NM_001248 ENTPD3 link to infopage 0.676954 2.234078e-15 3.870986e-11 1.138525e-12
35 7924987 8098895 NM_001013622 FAM53A link to infopage 0.675266 2.780731e-15 4.818172e-11 1.376621e-12
36 7924987 8135458 NM_024814 CBLL1 link to infopage -0.674856 2.931960e-15 5.080207e-11 1.411169e-12
37 7924987 7990683 NM_015162 ACSBG1 link to infopage 0.674736 2.977911e-15 5.159827e-11 1.394548e-12
38 7924987 8115691 NM_003062 SLIT3 link to infopage 0.674468 3.082597e-15 5.341215e-11 1.405583e-12
39 7924987 8005328 NM_016239 MYO15A link to infopage 0.673316 3.574587e-15 6.193687e-11 1.588125e-12
40 7924987 8153101 NM_152888 COL22A1 link to infopage 0.673203 3.626992e-15 6.284489e-11 1.571122e-12
41 7924987 8036460 NM_004647 DPF1 link to infopage 0.672568 3.934214e-15 6.816812e-11 1.662637e-12
42 7924987 8162283 NM_004560 ROR2 link to infopage 0.672131 4.160041e-15 7.208102e-11 1.716215e-12
43 7924987 8002706 AK129695 C16orf47 link to infopage 0.671993 4.234326e-15 7.336817e-11 1.706236e-12
44 7924987 7928838 NM_007078 LDB3 link to infopage 0.670817 4.918254e-15 8.521859e-11 1.936786e-12
45 7924987 7984001 NM_004751 GCNT3 link to infopage 0.670643 5.027847e-15 8.711750e-11 1.935944e-12
46 7924987 8104281 NM_182632 SLC6A18 link to infopage 0.668936 6.240509e-15 1.081293e-10 2.350637e-12
47 7924987 8049536 NM_001137550 LRRFIP1 link to infopage 0.668301 6.760273e-15 1.171353e-10 2.492239e-12
48 7924987 8137783 NM_001097620 TMEM184A link to infopage 0.667584 7.398116e-15 1.281872e-10 2.670566e-12
49 7924987 8032770 NM_016539 SIRT6 link to infopage 0.666816 8.144396e-15 1.411180e-10 2.879958e-12
50 7924987 7948973 NM_054108 HRASLS5 link to infopage 0.666640 8.326071e-15 1.442658e-10 2.885317e-12

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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