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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
4033 8163535 NM_001633 AMBP link to infopage alpha-1-microglobulin/bikunin precursor

Fetching correlation data, please wait...
Getting list of correlations for id 4033.
Getting list of p-values for id 4033.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.136 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8163535 7995334 link to infopage 0.649439 6.676835e-14 1.156895e-9 1.156895e-9
2 8163535 7899101 NM_006314 CNKSR1 link to infopage 0.627089 8.247439e-13 1.429034e-8 7.145169e-9
3 8163535 7982267 ENST00000459113 link to infopage 0.616512 2.529672e-12 4.383163e-8 1.461054e-8
4 8163535 7899727 NM_001160042 IQCC link to infopage 0.615392 2.841358e-12 4.923221e-8 1.230805e-8
5 8163535 8064014 NM_022082 SLC17A9 link to infopage 0.611708 4.151307e-12 7.192969e-8 1.438594e-8
6 8163535 8177709 NM_206809 MOG link to infopage 0.610445 4.722094e-12 8.181972e-8 1.363662e-8
7 8163535 7987792 NM_178034 PLA2G4D link to infopage 0.610318 4.783360e-12 8.288128e-8 1.184018e-8
8 8163535 7903694 NM_031936 GPR61 link to infopage 0.608333 5.849636e-12 1.013566e-7 1.266958e-8
9 8163535 8024712 NM_033064 ATCAY link to infopage 0.606998 6.692323e-12 1.159579e-7 1.288421e-8
10 8163535 8150214 AK091697 link to infopage 0.606691 6.902072e-12 1.195922e-7 1.195922e-8
11 8163535 8087907 NM_020163 SEMA3G link to infopage 0.606459 7.064354e-12 1.224041e-7 1.112764e-8
12 8163535 8125568 NM_080680 COL11A2 link to infopage 0.606093 7.328708e-12 1.269845e-7 1.058204e-8
13 8163535 8153101 NM_152888 COL22A1 link to infopage 0.605436 7.827227e-12 1.356224e-7 1.043249e-8
14 8163535 8153373 NM_000498 CYP11B2 link to infopage 0.605144 8.058843e-12 1.396356e-7 9.973970e-9
15 8163535 8042513 ENST00000459231 link to infopage 0.604672 8.448183e-12 1.463817e-7 9.758777e-9
16 8163535 7987046 ENST00000459113 link to infopage 0.604595 8.513205e-12 1.475083e-7 9.219269e-9
17 8163535 7982356 ENST00000459113 link to infopage 0.604595 8.513205e-12 1.475083e-7 8.676959e-9
18 8163535 7987137 ENST00000459113 link to infopage 0.604595 8.513205e-12 1.475083e-7 8.194906e-9
19 8163535 7896761 NM_152486 SAMD11 link to infopage 0.603531 9.464442e-12 1.639904e-7 8.631073e-9
20 8163535 7959880 ENST00000459050 link to infopage 0.602518 1.046430e-11 1.813148e-7 9.065742e-9
21 8163535 8166661 ENST00000327781 link to infopage 0.602437 1.054882e-11 1.827793e-7 8.703778e-9
22 8163535 8137151 NM_198455 SSPO link to infopage 0.601142 1.198826e-11 2.077206e-7 9.441844e-9
23 8163535 7973709 NM_004554 NFATC4 link to infopage 0.599226 1.447024e-11 2.507258e-7 1.090112e-8
24 8163535 7994216 NM_052944 SLC5A11 link to infopage 0.598817 1.506038e-11 2.609512e-7 1.087297e-8
25 8163535 8167228 NM_205856 SPACA5 link to infopage 0.598589 1.539938e-11 2.668250e-7 1.067300e-8
26 8163535 8074880 NM_004914 RAB36 link to infopage 0.597533 1.706988e-11 2.957697e-7 1.137576e-8
27 8163535 8174389 NM_033641 COL4A6 link to infopage 0.597136 1.774195e-11 3.074148e-7 1.138573e-8
28 8163535 8030220 NM_003660 PPFIA3 link to infopage 0.596725 1.846350e-11 3.199171e-7 1.142561e-8
29 8163535 7996468 NM_024712 ELMO3 link to infopage 0.596695 1.851781e-11 3.208580e-7 1.106407e-8
30 8163535 8117748 NM_206814 MOG link to infopage 0.593180 2.599167e-11 4.503576e-7 1.501192e-8
31 8163535 8066451 NM_182970 RIMS4 link to infopage 0.593039 2.634502e-11 4.564801e-7 1.472516e-8
32 8163535 8038093 NM_001080434 LMTK3 link to infopage 0.592721 2.716014e-11 4.706038e-7 1.470637e-8
33 8163535 7933327 NM_001137556 FAM25B link to infopage 0.591199 3.140590e-11 5.441700e-7 1.649000e-8
34 8163535 7933423 NM_001137556 FAM25B link to infopage 0.591199 3.140590e-11 5.441700e-7 1.600500e-8
35 8163535 7927363 NM_001137556 FAM25B link to infopage 0.591199 3.140590e-11 5.441700e-7 1.554771e-8
36 8163535 7914516 NR_026850 MTMR9L link to infopage 0.590949 3.216427e-11 5.573103e-7 1.548084e-8
37 8163535 7985459 ENST00000342039 link to infopage 0.590763 3.273799e-11 5.672511e-7 1.533111e-8
38 8163535 7985418 ENST00000342039 link to infopage 0.590763 3.273799e-11 5.672511e-7 1.492766e-8
39 8163535 7990928 ENST00000342039 link to infopage 0.590763 3.273799e-11 5.672511e-7 1.454490e-8
40 8163535 7991159 NR_027001 LOC388152 link to infopage 0.590132 3.475723e-11 6.022386e-7 1.505596e-8
41 8163535 8049950 AK094921 LOC100131763 link to infopage 0.589841 3.573252e-11 6.191373e-7 1.510091e-8
42 8163535 8099172 NM_001313 CRMP1 link to infopage 0.589617 3.649643e-11 6.323737e-7 1.505652e-8
43 8163535 7897132 NM_022114 PRDM16 link to infopage 0.588968 3.880751e-11 6.724177e-7 1.563762e-8
44 8163535 7933073 NM_153368 GJD4 link to infopage 0.588277 4.142270e-11 7.177311e-7 1.631207e-8
45 8163535 7950471 NM_001005285 OR2AT4 link to infopage 0.588118 4.205055e-11 7.286099e-7 1.619133e-8
46 8163535 7960397 NM_020638 FGF23 link to infopage 0.588086 4.217825e-11 7.308225e-7 1.588744e-8
47 8163535 7937728 NM_001145829 TNNI2 link to infopage 0.587938 4.276988e-11 7.410737e-7 1.576752e-8
48 8163535 8071745 NM_182520 C22orf15 link to infopage 0.587866 4.305836e-11 7.460721e-7 1.554317e-8
49 8163535 7946860 NM_000352 ABCC8 link to infopage 0.587749 4.353509e-11 7.543326e-7 1.539454e-8
50 8163535 8067867 ENST00000364942 link to infopage 0.587743 4.355990e-11 7.547624e-7 1.509525e-8

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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