[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
User requested variable id 3029.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
3029	8177709	NM_206809	MOG		myelin oligodendrocyte glycoprotein

Fetching correlation data, please wait...
Getting list of correlations for id 3029.
Getting list of p-values for id 3029.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.107 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8177709	8117748	NM_206814	MOG	0.982518	5.034965e-77	8.724084e-73	8.724084e-73
2	8177709	7898809	NM_017449	EPHB2	0.752496	2.151312e-20	3.727578e-16	1.863789e-16
3	8177709	8064014	NM_022082	SLC17A9	0.744658	8.592062e-20	1.488747e-15	4.962489e-16
4	8177709	8008277	NM_000023	SGCA	0.739858	1.957834e-19	3.392339e-15	8.480847e-16
5	8177709	7927367	NM_001040084	ANXA8	0.726868	1.665071e-18	2.885069e-14	5.770138e-15
6	8177709	7912863	NR_002729	MST1P9	0.724850	2.296639e-18	3.979387e-14	6.632312e-15
7	8177709	8049509	NM_015893	PRLH	0.722492	3.331928e-18	5.773232e-14	8.247474e-15
8	8177709	8166219	NM_032796	SYAP1	-0.720227	4.746485e-18	8.224234e-14	1.028029e-14
9	8177709	8082928	NM_001002026	CLDN18	0.712799	1.479198e-17	2.563006e-13	2.847784e-14
10	8177709	8067602	NM_152864	NKAIN4	0.709340	2.480928e-17	4.298704e-13	4.298704e-14
11	8177709	7931184	NM_005519	HMX2	0.709187	2.537794e-17	4.397236e-13	3.997487e-14
12	8177709	8170716	NM_005393	PLXNB3	0.707614	3.202416e-17	5.548826e-13	4.624022e-14
13	8177709	7898357	NM_020998	MST1	0.706393	3.831986e-17	6.639683e-13	5.107448e-14
14	8177709	8115524	NM_014666	CLINT1	-0.706035	4.037987e-17	6.996621e-13	4.997586e-14
15	8177709	8125568	NM_080680	COL11A2	0.704113	5.343787e-17	9.259180e-13	6.172787e-14
16	8177709	8054092	NM_015348	TMEM131	-0.703270	6.038943e-17	1.046368e-12	6.539798e-14
17	8177709	8043114	NM_031283	TCF7L1	0.702683	6.572713e-17	1.138854e-12	6.699141e-14
18	8177709	7950005	NM_001098515	MRGPRF	0.701305	8.014731e-17	1.388712e-12	7.715069e-14
19	8177709	8161164	NM_001004487	OR13J1	0.700882	8.516003e-17	1.475568e-12	7.766146e-14
20	8177709	7928126	NM_014431	KIAA1274	0.700558	8.921245e-17	1.545784e-12	7.728921e-14
21	8177709	7927307	NM_001630	ANXA8L2	0.700146	9.461805e-17	1.639447e-12	7.806891e-14
22	8177709	7983663	NM_005154	USP8	-0.699946	9.736468e-17	1.687038e-12	7.668353e-14
23	8177709	8099631	ENST00000421246		-0.699430	1.047946e-16	1.815776e-12	7.894678e-14
24	8177709	8069148	NM_198695	KRTAP10-8	0.698815	1.143676e-16	1.981648e-12	8.256865e-14
25	8177709	8086985	NM_000094	COL7A1	0.697995	1.284759e-16	2.226102e-12	8.904407e-14
26	8177709	8166661	ENST00000327781		0.697982	1.287111e-16	2.230178e-12	8.577608e-14
27	8177709	7999936	NM_003361	UMOD	0.697942	1.294465e-16	2.242919e-12	8.307107e-14
28	8177709	7987701	NM_016642	SPTBN5	0.696569	1.571277e-16	2.722552e-12	9.723400e-14
29	8177709	8046922	NM_000090	COL3A1	0.696476	1.591820e-16	2.758146e-12	9.510848e-14
30	8177709	8049919	NM_152783	D2HGDH	0.695932	1.718325e-16	2.977342e-12	9.924475e-14
31	8177709	7936108	NM_001001412	CALHM1	0.695317	1.873260e-16	3.245797e-12	1.047031e-13
32	8177709	8079021	NM_001904	CTNNB1	-0.695154	1.916422e-16	3.320584e-12	1.037683e-13
33	8177709	7934367	NM_004034	ANXA7	-0.693650	2.363954e-16	4.096023e-12	1.241219e-13
34	8177709	7935692	NM_001100626	ERLIN1	-0.693432	2.436458e-16	4.221651e-12	1.241662e-13
35	8177709	7897263	NM_207396	RNF207	0.692486	2.778205e-16	4.813796e-12	1.375370e-13
36	8177709	7990244	NM_005477	HCN4	0.690940	3.439013e-16	5.958778e-12	1.655216e-13
37	8177709	7997880	NM_004933	CDH15	0.689219	4.353973e-16	7.544129e-12	2.038954e-13
38	8177709	7910638	ENST00000410639		0.688891	4.553374e-16	7.889630e-12	2.076219e-13
39	8177709	7945688	NR_003512	INS-IGF2	0.688634	4.715882e-16	8.171208e-12	2.095182e-13
40	8177709	8036460	NM_004647	DPF1	0.687319	5.638599e-16	9.770000e-12	2.442500e-13
41	8177709	8086810	NM_003074	SMARCC1	-0.687222	5.713602e-16	9.899958e-12	2.414624e-13
42	8177709	7929674	BC037252	C10orf62	0.687136	5.780288e-16	1.001551e-11	2.384644e-13
43	8177709	8153704	NM_031309	SCRT1	0.687092	5.814839e-16	1.007537e-11	2.343110e-13
44	8177709	8038347	NM_003598	TEAD2	0.686942	5.934352e-16	1.028245e-11	2.336921e-13
45	8177709	7915598	NM_153274	BEST4	0.686740	6.098693e-16	1.056721e-11	2.348268e-13
46	8177709	7913450	NM_005529	HSPG2	0.685857	6.870678e-16	1.190482e-11	2.588005e-13
47	8177709	8008723	NM_000502	EPX	0.685831	6.894701e-16	1.194645e-11	2.541798e-13
48	8177709	8067506	BC137326	C20orf151	0.685414	7.293069e-16	1.263670e-11	2.632646e-13
49	8177709	8042119	NM_022894	PAPOLG	-0.685339	7.367624e-16	1.276588e-11	2.605282e-13
50	8177709	7953763	ENST00000459371		0.685292	7.414342e-16	1.284683e-11	2.569366e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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Remove	"self correlations", i.e. correlations of a variable with itself
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