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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
4448 8092165 NM_198407 GHSR link to infopage growth hormone secretagogue receptor

Fetching correlation data, please wait...
Getting list of correlations for id 4448.
Getting list of p-values for id 4448.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.141 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8092165 8125805 NM_000841 GRM4 link to infopage 0.740964 1.621912e-19 2.810286e-15 2.810286e-15
2 8092165 8167407 NM_181532 ERAS link to infopage 0.726781 1.688342e-18 2.925390e-14 1.462695e-14
3 8092165 8013259 ENST00000300983 link to infopage 0.721185 4.088802e-18 7.084667e-14 2.361556e-14
4 8092165 8062527 NM_001018082 ADIG link to infopage 0.718204 6.491987e-18 1.124867e-13 2.812166e-14
5 8092165 7905020 NM_000798 DRD5 link to infopage 0.714306 1.178011e-17 2.041140e-13 4.082280e-14
6 8092165 8068883 NM_000394 CRYAA link to infopage 0.712017 1.663776e-17 2.882825e-13 4.804708e-14
7 8092165 8053728 NM_000798 DRD5 link to infopage 0.711076 1.915809e-17 3.319523e-13 4.742175e-14
8 8092165 8060126 NM_198998 AQP12A link to infopage 0.704836 4.810560e-17 8.335257e-13 1.041907e-13
9 8092165 8049670 NM_002081 GPC1 link to infopage 0.704197 5.279328e-17 9.147492e-13 1.016388e-13
10 8092165 7896822 NM_198576 AGRN link to infopage 0.703231 6.072270e-17 1.052142e-12 1.052142e-13
11 8092165 8137330 ENST00000356058 link to infopage 0.702654 6.600490e-17 1.143667e-12 1.039697e-13
12 8092165 8048551 NM_005876 SPEG link to infopage 0.702564 6.686660e-17 1.158598e-12 9.654980e-14
13 8092165 7998601 NM_001146006 IGFALS link to infopage 0.702316 6.930254e-17 1.200805e-12 9.236963e-14
14 8092165 8151621 AF495523 REXO1L1 link to infopage 0.700138 9.472948e-17 1.641378e-12 1.172413e-13
15 8092165 8151617 AF495523 REXO1L1 link to infopage 0.700138 9.472948e-17 1.641378e-12 1.094252e-13
16 8092165 8151625 AF495523 REXO1L1 link to infopage 0.700138 9.472948e-17 1.641378e-12 1.025861e-13
17 8092165 8151605 AF495523 REXO1L1 link to infopage 0.700138 9.472948e-17 1.641378e-12 9.655163e-14
18 8092165 8151613 AF495523 REXO1L1 link to infopage 0.700138 9.472948e-17 1.641378e-12 9.118765e-14
19 8092165 8137183 NM_198455 SSPO link to infopage 0.699544 1.031007e-16 1.786426e-12 9.402241e-14
20 8092165 8070786 NM_198688 KRTAP10-6 link to infopage 0.698337 1.223935e-16 2.120713e-12 1.060356e-13
21 8092165 8004428 NM_001102614 AMAC1L3 link to infopage 0.696015 1.698445e-16 2.942895e-12 1.401379e-13
22 8092165 7900001 NM_178548 TFAP2E link to infopage 0.695933 1.718262e-16 2.977232e-12 1.353287e-13
23 8092165 7916493 NM_003713 PPAP2B link to infopage 0.695618 1.795699e-16 3.111408e-12 1.352786e-13
24 8092165 8018754 NM_134268 CYGB link to infopage 0.695161 1.914618e-16 3.317458e-12 1.382274e-13
25 8092165 8049729 NM_198998 AQP12A link to infopage 0.694997 1.958824e-16 3.394055e-12 1.357622e-13
26 8092165 7899939 NM_002060 GJA4 link to infopage 0.694490 2.102677e-16 3.643308e-12 1.401272e-13
27 8092165 8153346 NM_023946 LYNX1 link to infopage 0.693898 2.283588e-16 3.956773e-12 1.465472e-13
28 8092165 8028119 NM_001083961 WDR62 link to infopage 0.693840 2.302275e-16 3.989151e-12 1.424697e-13
29 8092165 8078435 NM_001039111 TRIM71 link to infopage 0.691892 3.016019e-16 5.225856e-12 1.802019e-13
30 8092165 8003939 NM_003963 TM4SF5 link to infopage 0.690480 3.663357e-16 6.347498e-12 2.115833e-13
31 8092165 8049598 NM_194312 ESPNL link to infopage 0.689690 4.082082e-16 7.073024e-12 2.281621e-13
32 8092165 8034940 NM_000435 NOTCH3 link to infopage 0.688142 5.042810e-16 8.737676e-12 2.730524e-13
33 8092165 8166899 NM_022567 NYX link to infopage 0.687471 5.523411e-16 9.570414e-12 2.900125e-13
34 8092165 7915614 NM_003738 PTCH2 link to infopage 0.687008 5.881549e-16 1.019096e-11 2.997341e-13
35 8092165 7936882 NM_001146340 NKX1-2 link to infopage 0.686828 6.026641e-16 1.044236e-11 2.983531e-13
36 8092165 8036702 NM_172139 IL28B link to infopage 0.686517 6.285123e-16 1.089023e-11 3.025064e-13
37 8092165 8046564 NM_024501 HOXD1 link to infopage 0.686485 6.312925e-16 1.093841e-11 2.956326e-13
38 8092165 8039605 NM_001005850 ZNF835 link to infopage 0.686032 6.711083e-16 1.162829e-11 3.060077e-13
39 8092165 7967149 NM_016237 ANAPC5 link to infopage -0.685946 6.789353e-16 1.176391e-11 3.016388e-13
40 8092165 7998700 NM_001009944 PKD1 link to infopage 0.685831 6.895404e-16 1.194767e-11 2.986916e-13
41 8092165 7981775 ENST00000435482 link to infopage 0.685747 6.973516e-16 1.208301e-11 2.947076e-13
42 8092165 8049952 NM_173821 C2orf85 link to infopage 0.685491 7.218432e-16 1.250738e-11 2.977947e-13
43 8092165 7936111 NM_001129742 CALHM3 link to infopage 0.685463 7.245436e-16 1.255417e-11 2.919574e-13
44 8092165 7991540 link to infopage 0.685347 7.358981e-16 1.275091e-11 2.897933e-13
45 8092165 8147447 NM_014754 PTDSS1 link to infopage -0.685286 7.420517e-16 1.285753e-11 2.857229e-13
46 8092165 8020162 NM_054028 AMAC1L2 link to infopage 0.685252 7.453723e-16 1.291507e-11 2.807623e-13
47 8092165 8029458 NM_001039213 CEACAM16 link to infopage 0.684418 8.337642e-16 1.444663e-11 3.073751e-13
48 8092165 8067270 NM_153360 APCDD1L link to infopage 0.684037 8.773814e-16 1.520239e-11 3.167164e-13
49 8092165 8098848 NM_213613 SLC26A1 link to infopage 0.684018 8.796359e-16 1.524145e-11 3.110500e-13
50 8092165 8119435 NM_004828 NCR2 link to infopage 0.683883 8.956355e-16 1.551868e-11 3.103735e-13

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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