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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
3394 7979357 NM_021728 OTX2 link to infopage orthodenticle homeobox 2

Fetching correlation data, please wait...
Getting list of correlations for id 3394.
Getting list of p-values for id 3394.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.132 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7979357 8035648 NM_001001524 TM6SF2 link to infopage 0.777956 1.634494e-22 2.832088e-18 2.832088e-18
2 7979357 7914667 NM_052896 CSMD2 link to infopage 0.771464 6.020451e-22 1.043164e-17 5.215818e-18
3 7979357 8098421 ENST00000410927 link to infopage 0.766491 1.588588e-21 2.752546e-17 9.175153e-18
4 7979357 7906307 NM_018240 KIRREL link to infopage 0.754794 1.419244e-20 2.459124e-16 6.147811e-17
5 7979357 7970241 NM_000504 F10 link to infopage 0.747991 4.797780e-20 8.313113e-16 1.662623e-16
6 7979357 8025053 NM_003811 TNFSF9 link to infopage 0.747455 5.272245e-20 9.135219e-16 1.522537e-16
7 7979357 8151621 AF495523 REXO1L1 link to infopage 0.747079 5.632904e-20 9.760133e-16 1.394305e-16
8 7979357 8151617 AF495523 REXO1L1 link to infopage 0.747079 5.632904e-20 9.760133e-16 1.220017e-16
9 7979357 8151613 AF495523 REXO1L1 link to infopage 0.747079 5.632904e-20 9.760133e-16 1.084459e-16
10 7979357 8151625 AF495523 REXO1L1 link to infopage 0.747079 5.632904e-20 9.760133e-16 9.760133e-17
11 7979357 8151605 AF495523 REXO1L1 link to infopage 0.747079 5.632904e-20 9.760133e-16 8.872848e-17
12 7979357 7927367 NM_001040084 ANXA8 link to infopage 0.746557 6.172349e-20 1.069483e-15 8.912357e-17
13 7979357 8065580 NM_080611 DUSP15 link to infopage 0.744634 8.628518e-20 1.495063e-15 1.150049e-16
14 7979357 7927307 NM_001630 ANXA8L2 link to infopage 0.743973 9.675742e-20 1.676516e-15 1.197511e-16
15 7979357 7992845 NM_003456 ZNF205 link to infopage 0.743128 1.119399e-19 1.939582e-15 1.293055e-16
16 7979357 7952227 NM_015645 C1QTNF5 link to infopage 0.741933 1.374422e-19 2.381461e-15 1.488413e-16
17 7979357 8016640 NR_024193 HILS1 link to infopage 0.740503 1.754672e-19 3.040320e-15 1.788424e-16
18 7979357 7911941 NM_015557 CHD5 link to infopage 0.740096 1.880279e-19 3.257960e-15 1.809978e-16
19 7979357 7942717 NM_000260 MYO7A link to infopage 0.739497 2.081403e-19 3.606447e-15 1.898130e-16
20 7979357 7920744 NM_000298 PKLR link to infopage 0.735539 4.045138e-19 7.009011e-15 3.504506e-16
21 7979357 8039378 NM_003180 SYT5 link to infopage 0.734825 4.554176e-19 7.891020e-15 3.757629e-16
22 7979357 8038299 NM_033142 CGB7 link to infopage 0.734412 4.877199e-19 8.450722e-15 3.841237e-16
23 7979357 7933312 NM_001098845 ANXA8L1 link to infopage 0.733639 5.541768e-19 9.602222e-15 4.174879e-16
24 7979357 8059028 NM_194302 CCDC108 link to infopage 0.732001 7.253297e-19 1.256779e-14 5.236578e-16
25 7979357 7997880 NM_004933 CDH15 link to infopage 0.730390 9.433219e-19 1.634494e-14 6.537975e-16
26 7979357 7942123 NM_053056 CCND1 link to infopage 0.728606 1.259451e-18 2.182251e-14 8.393273e-16
27 7979357 7944447 NM_022169 ABCG4 link to infopage 0.727892 1.412809e-18 2.447974e-14 9.066569e-16
28 7979357 8033674 NM_024690 MUC16 link to infopage 0.726037 1.901479e-18 3.294692e-14 1.176676e-15
29 7979357 8115849 link to infopage 0.725816 1.969757e-18 3.412999e-14 1.176896e-15
30 7979357 8049509 NM_015893 PRLH link to infopage 0.724702 2.351191e-18 4.073909e-14 1.357970e-15
31 7979357 7990683 NM_015162 ACSBG1 link to infopage 0.724610 2.385577e-18 4.133490e-14 1.333384e-15
32 7979357 8067610 NM_000744 CHRNA4 link to infopage 0.724354 2.484411e-18 4.304738e-14 1.345231e-15
33 7979357 8005879 NR_027384 SLC13A2 link to infopage 0.723913 2.663952e-18 4.615830e-14 1.398736e-15
34 7979357 8034469 NM_032301 FBXW9 link to infopage 0.723604 2.797073e-18 4.846489e-14 1.425438e-15
35 7979357 7955184 NM_006262 PRPH link to infopage 0.722029 3.583188e-18 6.208590e-14 1.773883e-15
36 7979357 7988050 NM_201631 TGM5 link to infopage 0.722007 3.595581e-18 6.230063e-14 1.730573e-15
37 7979357 8046922 NM_000090 COL3A1 link to infopage 0.720230 4.744579e-18 8.220932e-14 2.221874e-15
38 7979357 7962625 NM_001098531 RAPGEF3 link to infopage 0.720081 4.855911e-18 8.413838e-14 2.214168e-15
39 7979357 8048551 NM_005876 SPEG link to infopage 0.719817 5.058724e-18 8.765251e-14 2.247500e-15
40 7979357 8131056 NM_017781 CYP2W1 link to infopage 0.719736 5.123127e-18 8.876841e-14 2.219210e-15
41 7979357 8004842 NM_173728 ARHGEF15 link to infopage 0.719141 5.617815e-18 9.733988e-14 2.374143e-15
42 7979357 7999387 NM_001424 EMP2 link to infopage 0.718504 6.198770e-18 1.074061e-13 2.557288e-15
43 7979357 8038292 NM_033043 CGB5 link to infopage 0.718144 6.552921e-18 1.135425e-13 2.640522e-15
44 7979357 8166657 ENST00000410990 link to infopage 0.718077 6.620843e-18 1.147193e-13 2.607258e-15
45 7979357 8060594 NM_001501 GNRH2 link to infopage 0.717810 6.899052e-18 1.195399e-13 2.656442e-15
46 7979357 7937443 NM_022772 EPS8L2 link to infopage 0.717211 7.563687e-18 1.310560e-13 2.849044e-15
47 7979357 7913450 NM_005529 HSPG2 link to infopage 0.717204 7.571833e-18 1.311971e-13 2.791429e-15
48 7979357 8114550 NM_004883 NRG2 link to infopage 0.717016 7.793677e-18 1.350410e-13 2.813355e-15
49 7979357 8086595 NM_005283 XCR1 link to infopage 0.716837 8.010719e-18 1.388017e-13 2.832688e-15
50 7979357 7936762 NM_001001976 ATE1 link to infopage -0.715702 9.527435e-18 1.650819e-13 3.301637e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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