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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
2878 7918394 NM_139053 EPS8L3 link to infopage EPS8-like 3

Fetching correlation data, please wait...
Getting list of correlations for id 2878.
Getting list of p-values for id 2878.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.155 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7918394 7913450 NM_005529 HSPG2 link to infopage 0.798851 1.791260e-24 3.103717e-20 3.103717e-20
2 7918394 7987701 NM_016642 SPTBN5 link to infopage 0.780189 1.033290e-22 1.790382e-18 8.951911e-19
3 7918394 8030582 NM_001145809 MYH14 link to infopage 0.777935 1.641446e-22 2.844133e-18 9.480443e-19
4 7918394 8046922 NM_000090 COL3A1 link to infopage 0.775142 2.891906e-22 5.010806e-18 1.252701e-18
5 7918394 7952893 BC024764 IQSEC3 link to infopage 0.773813 3.775217e-22 6.541318e-18 1.308264e-18
6 7918394 8015189 NM_030966 KRTAP1-3 link to infopage 0.765977 1.753647e-21 3.038544e-17 5.064240e-18
7 7918394 8019585 NM_030966 KRTAP1-3 link to infopage 0.765977 1.753647e-21 3.038544e-17 4.340778e-18
8 7918394 8058614 NM_006055 LANCL1 link to infopage -0.762101 3.666905e-21 6.353646e-17 7.942058e-18
9 7918394 8013042 NM_000422 KRT17 link to infopage 0.760962 4.542546e-21 7.870869e-17 8.745410e-18
10 7918394 7955184 NM_006262 PRPH link to infopage 0.759808 5.637019e-21 9.767263e-17 9.767263e-18
11 7918394 8114550 NM_004883 NRG2 link to infopage 0.759739 5.709544e-21 9.892927e-17 8.993570e-18
12 7918394 8028407 NM_000540 RYR1 link to infopage 0.758139 7.684762e-21 1.331539e-16 1.109616e-17
13 7918394 7998629 ENST00000431136 link to infopage 0.757803 8.176392e-21 1.416723e-16 1.089787e-17
14 7918394 8061529 NM_014012 REM1 link to infopage 0.757566 8.541182e-21 1.479931e-16 1.057093e-17
15 7918394 8067820 BC024764 IQSEC3 link to infopage 0.756247 1.088555e-20 1.886138e-16 1.257426e-17
16 7918394 8117849 NM_033229 TRIM15 link to infopage 0.754397 1.525571e-20 2.643357e-16 1.652098e-17
17 7918394 8177760 NM_033229 TRIM15 link to infopage 0.754397 1.525571e-20 2.643357e-16 1.554916e-17
18 7918394 8179070 NM_033229 TRIM15 link to infopage 0.754397 1.525571e-20 2.643357e-16 1.468532e-17
19 7918394 7937560 NM_002457 MUC2 link to infopage 0.753258 1.874938e-20 3.248705e-16 1.709845e-17
20 7918394 8116033 NM_000505 F12 link to infopage 0.750678 2.979502e-20 5.162583e-16 2.581292e-17
21 7918394 8033487 NM_032447 FBN3 link to infopage 0.748826 4.140451e-20 7.174159e-16 3.416266e-17
22 7918394 8125383 NM_004557 NOTCH4 link to infopage 0.748066 4.734866e-20 8.204102e-16 3.729137e-17
23 7918394 7977978 NM_005864 EFS link to infopage 0.746810 5.904866e-20 1.023136e-15 4.448418e-17
24 7918394 8038670 NM_012427 KLK5 link to infopage 0.746477 6.258982e-20 1.084494e-15 4.518724e-17
25 7918394 7970241 NM_000504 F10 link to infopage 0.746360 6.387947e-20 1.106840e-15 4.427358e-17
26 7918394 8137783 NM_001097620 TMEM184A link to infopage 0.746344 6.406158e-20 1.109995e-15 4.269211e-17
27 7918394 8016168 NM_133373 PLCD3 link to infopage 0.745590 7.307688e-20 1.266203e-15 4.689641e-17
28 7918394 7997801 NM_013278 IL17C link to infopage 0.744591 8.692587e-20 1.506165e-15 5.379159e-17
29 7918394 7997880 NM_004933 CDH15 link to infopage 0.744425 8.947373e-20 1.550311e-15 5.345901e-17
30 7918394 7921462 NM_001013661 VSIG8 link to infopage 0.744333 9.089845e-20 1.574997e-15 5.249992e-17
31 7918394 8072316 NM_001017437 CCDC157 link to infopage 0.744045 9.554471e-20 1.655503e-15 5.340333e-17
32 7918394 8059028 NM_194302 CCDC108 link to infopage 0.743539 1.042827e-19 1.806906e-15 5.646582e-17
33 7918394 8156415 NM_006648 WNK2 link to infopage 0.742884 1.167462e-19 2.022861e-15 6.129881e-17
34 7918394 8090639 NM_014602 PIK3R4 link to infopage -0.742682 1.208729e-19 2.094365e-15 6.159897e-17
35 7918394 8151609 NM_172239 REXO1L1 link to infopage 0.742368 1.275580e-19 2.210197e-15 6.314849e-17
36 7918394 8108453 NM_032289 PSD2 link to infopage 0.741772 1.412968e-19 2.448250e-15 6.800695e-17
37 7918394 8049729 NM_198998 AQP12A link to infopage 0.740634 1.715833e-19 2.973023e-15 8.035198e-17
38 7918394 8010113 NM_144677 MGAT5B link to infopage 0.740534 1.745277e-19 3.024041e-15 7.958003e-17
39 7918394 8157804 NM_182487 OLFML2A link to infopage 0.740127 1.870403e-19 3.240848e-15 8.309866e-17
40 7918394 8060134 NM_004321 KIF1A link to infopage 0.740006 1.909216e-19 3.308099e-15 8.270248e-17
41 7918394 8065576 NM_004118 FOXS1 link to infopage 0.739141 2.210476e-19 3.830092e-15 9.341688e-17
42 7918394 8110821 NM_001044 SLC6A3 link to infopage 0.739118 2.219220e-19 3.845243e-15 9.155341e-17
43 7918394 8034151 NM_020812 DOCK6 link to infopage 0.737863 2.742111e-19 4.751255e-15 1.104943e-16
44 7918394 7977216 NM_015656 KIF26A link to infopage 0.736326 3.547869e-19 6.147392e-15 1.397135e-16
45 7918394 8049128 NM_031313 ALPPL2 link to infopage 0.735951 3.776585e-19 6.543689e-15 1.454153e-16
46 7918394 7903632 NM_001408 CELSR2 link to infopage 0.735505 4.068073e-19 7.048750e-15 1.532337e-16
47 7918394 8029458 NM_001039213 CEACAM16 link to infopage 0.735498 4.072330e-19 7.056126e-15 1.501303e-16
48 7918394 8111216 ENST00000426411 link to infopage 0.734293 4.973612e-19 8.617777e-15 1.795370e-16
49 7918394 8005328 NM_016239 MYO15A link to infopage 0.733548 5.625401e-19 9.747133e-15 1.989211e-16
50 7918394 7921936 NM_177398 LMX1A link to infopage 0.733460 5.707722e-19 9.889769e-15 1.977954e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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