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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
6362 7969145 NM_138450 ARL11 link to infopage ADP-ribosylation factor-like 11

Fetching correlation data, please wait...
Getting list of correlations for id 6362.
Getting list of p-values for id 6362.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.146 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7969145 8157941 NM_001099270 ZBTB34 link to infopage 0.738514 2.457354e-19 4.257858e-15 4.257858e-15
2 7969145 7950409 NM_005472 KCNE3 link to infopage 0.736195 3.626385e-19 6.283438e-15 3.141719e-15
3 7969145 7940191 NM_004177 STX3 link to infopage 0.735686 3.947295e-19 6.839478e-15 2.279826e-15
4 7969145 7990810 NM_006441 MTHFS link to infopage 0.729542 1.082523e-18 1.875688e-14 4.689220e-15
5 7969145 8094228 NM_004334 BST1 link to infopage 0.721391 3.959040e-18 6.859828e-14 1.371966e-14
6 7969145 8151756 NM_018710 TMEM55A link to infopage 0.719261 5.514743e-18 9.555394e-14 1.592566e-14
7 7969145 7965156 NM_004664 LIN7A link to infopage 0.718541 6.163719e-18 1.067988e-13 1.525697e-14
8 7969145 8157945 NM_001099270 ZBTB34 link to infopage 0.716696 8.184641e-18 1.418153e-13 1.772691e-14
9 7969145 7973660 NM_016576 GMPR2 link to infopage 0.715326 1.008932e-17 1.748176e-13 1.942418e-14
10 7969145 8044919 NM_002881 RALB link to infopage 0.711799 1.719182e-17 2.978827e-13 2.978827e-14
11 7969145 8113130 NM_024717 MCTP1 link to infopage 0.707030 3.489533e-17 6.046314e-13 5.496649e-14
12 7969145 7965606 NM_002108 HAL link to infopage 0.705335 4.473285e-17 7.750862e-13 6.459051e-14
13 7969145 7929616 NM_005479 FRAT1 link to infopage 0.704460 5.081432e-17 8.804598e-13 6.772768e-14
14 7969145 7990815 NM_001100880 ST20 link to infopage 0.702743 6.516365e-17 1.129091e-12 8.064932e-14
15 7969145 8098177 NM_007246 KLHL2 link to infopage 0.702671 6.584511e-17 1.140898e-12 7.605988e-14
16 7969145 7922976 NM_000963 PTGS2 link to infopage 0.701309 8.010912e-17 1.388051e-12 8.675317e-14
17 7969145 8000184 NM_005849 IGSF6 link to infopage 0.700991 8.384598e-17 1.452799e-12 8.545878e-14
18 7969145 8165735 NM_001161531 CSF2RA link to infopage 0.699994 9.669708e-17 1.675470e-12 9.308168e-14
19 7969145 8176306 NM_001161531 CSF2RA link to infopage 0.699994 9.669708e-17 1.675470e-12 8.818265e-14
20 7969145 7946559 NM_001017998 GNG10 link to infopage 0.697108 1.456371e-16 2.523454e-12 1.261727e-13
21 7969145 8066402 NM_016470 C20orf111 link to infopage 0.696377 1.614297e-16 2.797093e-12 1.331949e-13
22 7969145 7922474 NM_014656 KIAA0040 link to infopage 0.696237 1.646253e-16 2.852462e-12 1.296574e-13
23 7969145 8011018 NM_016823 CRK link to infopage 0.692766 2.672373e-16 4.630421e-12 2.013226e-13
24 7969145 7998637 NM_016332 SEPX1 link to infopage 0.692520 2.764956e-16 4.790839e-12 1.996183e-13
25 7969145 7932867 NM_001143770 ZNF438 link to infopage 0.690612 3.597453e-16 6.233307e-12 2.493323e-13
26 7969145 8068280 NM_005534 IFNGR2 link to infopage 0.689807 4.017344e-16 6.960853e-12 2.677251e-13
27 7969145 7929511 NM_001776 ENTPD1 link to infopage 0.688968 4.506037e-16 7.807610e-12 2.891708e-13
28 7969145 8093961 NM_014743 KIAA0232 link to infopage 0.688703 4.671831e-16 8.094882e-12 2.891029e-13
29 7969145 7971482 ENST00000410142 link to infopage 0.688662 4.697956e-16 8.140148e-12 2.806948e-13
30 7969145 8016847 NM_005082 TRIM25 link to infopage 0.686789 6.058731e-16 1.049796e-11 3.499321e-13
31 7969145 8104492 NM_031916 ROPN1L link to infopage 0.686167 6.590005e-16 1.141850e-11 3.683388e-13
32 7969145 7924107 NM_014873 LPGAT1 link to infopage 0.686004 6.735815e-16 1.167115e-11 3.647233e-13
33 7969145 8174474 NM_022977 ACSL4 link to infopage 0.685097 7.611252e-16 1.318802e-11 3.996369e-13
34 7969145 8101511 NM_014991 WDFY3 link to infopage 0.684678 8.051986e-16 1.395168e-11 4.103434e-13
35 7969145 8149264 NM_024607 PPP1R3B link to infopage 0.684163 8.626782e-16 1.494763e-11 4.270750e-13
36 7969145 8047161 NM_001031716 OBFC2A link to infopage 0.683374 9.586096e-16 1.660983e-11 4.613841e-13
37 7969145 8157233 NM_032303 HSDL2 link to infopage 0.683349 9.618566e-16 1.666609e-11 4.504349e-13
38 7969145 7960757 NM_016546 C1RL link to infopage 0.681935 1.160929e-15 2.011541e-11 5.293530e-13
39 7969145 8041508 NM_012413 QPCT link to infopage 0.681295 1.263739e-15 2.189681e-11 5.614566e-13
40 7969145 8119000 NM_001315 MAPK14 link to infopage 0.680722 1.363316e-15 2.362218e-11 5.905545e-13
41 7969145 8093145 NM_032898 C3orf34 link to infopage 0.680003 1.498904e-15 2.597151e-11 6.334515e-13
42 7969145 8166243 NM_004726 REPS2 link to infopage 0.679932 1.512879e-15 2.621365e-11 6.241346e-13
43 7969145 8124262 NM_016614 TDP2 link to infopage 0.679057 1.697283e-15 2.940882e-11 6.839260e-13
44 7969145 7954729 NM_139241 FGD4 link to infopage 0.677780 2.006168e-15 3.476087e-11 7.900198e-13
45 7969145 8093974 AF130051 link to infopage 0.675585 2.668540e-15 4.623780e-11 1.027507e-12
46 7969145 7979085 NM_002863 PYGL link to infopage 0.675561 2.676753e-15 4.638010e-11 1.008263e-12
47 7969145 8171802 NM_001037171 ACOT9 link to infopage 0.675527 2.688619e-15 4.658570e-11 9.911851e-13
48 7969145 8046726 NM_001130445 SSFA2 link to infopage 0.673029 3.708826e-15 6.426283e-11 1.338809e-12
49 7969145 8157947 NM_001099270 ZBTB34 link to infopage 0.672373 4.033748e-15 6.989275e-11 1.426383e-12
50 7969145 8072744 NM_013416 NCF4 link to infopage 0.669941 5.496295e-15 9.523430e-11 1.904686e-12

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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