[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
15818	8119000	NM_001315	MAPK14		mitogen-activated protein kinase 14

Fetching correlation data, please wait...
Getting list of correlations for id 15818.
Getting list of p-values for id 15818.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.164 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8119000	8174474	NM_022977	ACSL4	0.898086	1.575362e-38	2.729629e-34	2.729629e-34
2	8119000	8089527	NM_022488	ATG3	0.890363	5.542924e-37	9.604225e-33	4.802113e-33
3	8119000	8146544	NM_001077619	UBXN2B	0.883041	1.277554e-35	2.213619e-31	7.378729e-32
4	8119000	8054329	NM_173647	RNF149	0.880580	3.499769e-35	6.064050e-31	1.516012e-31
5	8119000	8047161	NM_001031716	OBFC2A	0.880237	4.019430e-35	6.964467e-31	1.392893e-31
6	8119000	7951397	NM_033292	CASP1	0.877461	1.216302e-34	2.107487e-30	3.512478e-31
7	8119000	7956878	NM_007199	IRAK3	0.875495	2.621516e-34	4.542301e-30	6.489002e-31
8	8119000	7971573	NM_001268	RCBTB2	0.875009	3.163188e-34	5.480855e-30	6.851069e-31
9	8119000	8018364	NM_002086	GRB2	0.874721	3.534143e-34	6.123610e-30	6.804011e-31
10	8119000	8122600	NM_001127715	STXBP5	0.871840	1.056328e-33	1.830299e-29	1.830299e-30
11	8119000	8162276	NM_005384	NFIL3	0.871824	1.062703e-33	1.841345e-29	1.673950e-30
12	8119000	7968132	NM_014089	NUPL1	0.871361	1.263954e-33	2.190053e-29	1.825044e-30
13	8119000	8107356	NM_152624	DCP2	0.870763	1.579782e-33	2.737289e-29	2.105607e-30
14	8119000	8078738	NM_005109	OXSR1	0.870763	1.580159e-33	2.737941e-29	1.955672e-30
15	8119000	8166065	NM_138636	TLR8	0.869496	2.525379e-33	4.375724e-29	2.917149e-30
16	8119000	7918902	NR_026665	CD58	0.867804	4.688048e-33	8.122981e-29	5.076863e-30
17	8119000	8155192	NM_022343	GLIPR2	0.867201	5.831723e-33	1.010463e-28	5.943898e-30
18	8119000	8120943	NM_016230	CYB5R4	0.866419	7.731672e-33	1.339667e-28	7.442593e-30
19	8119000	7978932	NM_006939	SOS2	0.866090	8.699831e-33	1.507420e-28	7.933788e-30
20	8119000	7936064	NM_012229	NT5C2	0.863865	1.915957e-32	3.319779e-28	1.659890e-29
21	8119000	8135514	NM_001550	IFRD1	0.863815	1.950307e-32	3.379297e-28	1.609189e-29
22	8119000	8047381	NM_003879	CFLAR	0.863232	2.392969e-32	4.146298e-28	1.884681e-29
23	8119000	8007976	NM_006310	NPEPPS	0.863174	2.441422e-32	4.230253e-28	1.839240e-29
24	8119000	8044919	NM_002881	RALB	0.862907	2.680821e-32	4.645058e-28	1.935441e-29
25	8119000	8041508	NM_012413	QPCT	0.862517	3.071024e-32	5.321164e-28	2.128466e-29
26	8119000	7980547	NM_005065	SEL1L	0.860927	5.321870e-32	9.221204e-28	3.546617e-29
27	8119000	8105506	NM_020928	ZSWIM6	0.860495	6.172373e-32	1.069487e-27	3.961063e-29
28	8119000	7916077	NM_002525	NRD1	0.858954	1.043517e-31	1.808102e-27	6.457508e-29
29	8119000	8167006	NM_006915	RP2	0.858911	1.058716e-31	1.834437e-27	6.325646e-29
30	8119000	7989023	NM_004580	RAB27A	0.858823	1.090882e-31	1.890170e-27	6.300568e-29
31	8119000	8102817	NM_201999	ELF2	0.858566	1.189575e-31	2.061176e-27	6.648955e-29
32	8119000	8043105	NM_020122	KCMF1	0.858054	1.413377e-31	2.448958e-27	7.652993e-29
33	8119000	7951372	NM_033306	CASP4	0.856369	2.481995e-31	4.300554e-27	1.303198e-28
34	8119000	8157233	NM_032303	HSDL2	0.855827	2.969877e-31	5.145905e-27	1.513502e-28
35	8119000	8054997	NM_006609	MAP3K2	0.854299	4.907471e-31	8.503176e-27	2.429479e-28
36	8119000	8162086	NM_015239	AGTPBP1	0.853833	5.713841e-31	9.900372e-27	2.750103e-28
37	8119000	7957177	NM_014999	RAB21	0.852617	8.476483e-31	1.468720e-26	3.969514e-28
38	8119000	8048234	NM_152862	ARPC2	0.852494	8.819294e-31	1.528119e-26	4.021366e-28
39	8119000	8116372	NM_018434	RNF130	0.851211	1.331216e-30	2.306597e-26	5.914352e-28
40	8119000	8089911	NM_005335	HCLS1	0.850884	1.477482e-30	2.560034e-26	6.400084e-28
41	8119000	7900382	NM_006367	CAP1	0.850772	1.531529e-30	2.653680e-26	6.472391e-28
42	8119000	8168500	NM_000291	PGK1	0.850652	1.590814e-30	2.756404e-26	6.562867e-28
43	8119000	7946478	NM_015213	DENND5A	0.850408	1.719180e-30	2.978823e-26	6.927495e-28
44	8119000	7936706	NM_024834	C10orf119	0.850383	1.732726e-30	3.002294e-26	6.823396e-28
45	8119000	8093961	NM_014743	KIAA0232	0.849953	1.986025e-30	3.441185e-26	7.647077e-28
46	8119000	8102006	NM_005908	MANBA	0.848815	2.843128e-30	4.926288e-26	1.070932e-27
47	8119000	8098177	NM_007246	KLHL2	0.848667	2.978162e-30	5.160262e-26	1.097928e-27
48	8119000	8100382	NM_012110	CHIC2	0.848540	3.099241e-30	5.370055e-26	1.118762e-27
49	8119000	8008834	NM_004859	CLTC	0.847659	4.080516e-30	7.070310e-26	1.442920e-27
50	8119000	7954511	NM_015000	STK38L	0.847211	4.690290e-30	8.126865e-26	1.625373e-27

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
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