[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
17117	7900382	NM_006367	CAP1		CAP, adenylate cyclase-associated protein 1 (yeast)

Fetching correlation data, please wait...
Getting list of correlations for id 17117.
Getting list of p-values for id 17117.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.152 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7900382	8089911	NM_005335	HCLS1	0.913119	6.271001e-42	1.086576e-37	1.086576e-37
2	7900382	8168500	NM_000291	PGK1	0.883282	1.155960e-35	2.002932e-31	1.001466e-31
3	7900382	8018364	NM_002086	GRB2	0.880965	2.993823e-35	5.187396e-31	1.729132e-31
4	7900382	8048234	NM_152862	ARPC2	0.876684	1.650441e-34	2.859719e-30	7.149299e-31
5	7900382	8127145	NM_021814	ELOVL5	0.868148	4.137297e-33	7.168695e-29	1.433739e-29
6	7900382	7911619	NM_002074	GNB1	0.865402	1.112090e-32	1.926918e-28	3.211530e-29
7	7900382	7982531	NM_006305	ANP32A	0.859643	8.259330e-32	1.431094e-27	2.044420e-28
8	7900382	8043945	NM_145686	MAP4K4	0.856015	2.791071e-31	4.836089e-27	6.045111e-28
9	7900382	7980005	NM_001005743	NUMB	0.854693	4.314181e-31	7.475181e-27	8.305757e-28
10	7900382	7956593	NM_006812	OS9	0.852614	8.484658e-31	1.470137e-26	1.470137e-27
11	7900382	8119000	NM_001315	MAPK14	0.850772	1.531529e-30	2.653680e-26	2.412437e-27
12	7900382	7990020	NM_006305	ANP32A	0.850043	1.930313e-30	3.344653e-26	2.787211e-27
13	7900382	7958600	NM_033121	ANKRD13A	0.849625	2.203181e-30	3.817452e-26	2.936501e-27
14	7900382	8078738	NM_005109	OXSR1	0.846413	6.004256e-30	1.040358e-25	7.431125e-27
15	7900382	7950578	NM_001128620	PAK1	0.845446	8.082551e-30	1.400464e-25	9.336424e-27
16	7900382	7971573	NM_001268	RCBTB2	0.845150	8.851188e-30	1.533645e-25	9.585284e-27
17	7900382	8102006	NM_005908	MANBA	0.845091	9.009972e-30	1.561158e-25	9.183282e-27
18	7900382	8072279	NM_153050	MTMR3	0.844683	1.020573e-29	1.768346e-25	9.824145e-27
19	7900382	8116372	NM_018434	RNF130	0.843117	1.640694e-29	2.842830e-25	1.496226e-26
20	7900382	8039796	NM_014453	CHMP2A	0.842378	2.048954e-29	3.550223e-25	1.775112e-26
21	7900382	8155192	NM_022343	GLIPR2	0.841171	2.938118e-29	5.090876e-25	2.424227e-26
22	7900382	8094556	NM_018290	PGM2	0.841060	3.037133e-29	5.262440e-25	2.392018e-26
23	7900382	7980547	NM_005065	SEL1L	0.839352	5.030562e-29	8.716455e-25	3.789763e-26
24	7900382	8165911	NM_005647	TBL1X	0.836128	1.283476e-28	2.223879e-24	9.266160e-26
25	7900382	8072302	NM_153050	MTMR3	0.834625	1.972982e-28	3.418585e-24	1.367434e-25
26	7900382	7973660	NM_016576	GMPR2	0.834601	1.986195e-28	3.441479e-24	1.323646e-25
27	7900382	8063509	NM_016407	C20orf43	0.834502	2.042980e-28	3.539872e-24	1.311064e-25
28	7900382	8122600	NM_001127715	STXBP5	0.833630	2.615940e-28	4.532639e-24	1.618800e-25
29	7900382	8047381	NM_003879	CFLAR	0.832713	3.387341e-28	5.869246e-24	2.023878e-25
30	7900382	7979473	NM_016029	DHRS7	0.831718	4.475055e-28	7.753928e-24	2.584643e-25
31	7900382	7979044	NM_020921	NIN	0.830256	6.716919e-28	1.163841e-23	3.754324e-25
32	7900382	7979085	NM_002863	PYGL	0.830186	6.848274e-28	1.186600e-23	3.708126e-25
33	7900382	8082431	NM_004637	RAB7A	0.829557	8.145394e-28	1.411352e-23	4.276826e-25
34	7900382	8155883	NM_012383	OSTF1	0.829287	8.773932e-28	1.520259e-23	4.471350e-25
35	7900382	8091048	NR_023350	COPB2	0.827890	1.285381e-27	2.227180e-23	6.363371e-25
36	7900382	8074791	NM_002745	MAPK1	0.827301	1.508645e-27	2.614029e-23	7.261192e-25
37	7900382	7905444	NM_030918	SNX27	0.827004	1.635040e-27	2.833034e-23	7.656848e-25
38	7900382	8124166	NM_001080480	MBOAT1	0.826999	1.637043e-27	2.836504e-23	7.464483e-25
39	7900382	8007976	NM_006310	NPEPPS	0.826717	1.766850e-27	3.061421e-23	7.849798e-25
40	7900382	8107356	NM_152624	DCP2	0.825940	2.178525e-27	3.774730e-23	9.436825e-25
41	7900382	7966268	NM_057169	GIT2	0.825671	2.341501e-27	4.057119e-23	9.895411e-25
42	7900382	8157945	NM_001099270	ZBTB34	0.825654	2.352521e-27	4.076214e-23	9.705271e-25
43	7900382	8103911	NM_002199	IRF2	0.824407	3.283066e-27	5.688569e-23	1.322923e-24
44	7900382	8076515	NM_014570	ARFGAP3	0.824282	3.393957e-27	5.880710e-23	1.336525e-24
45	7900382	8064790	NM_014737	RASSF2	0.823680	3.982858e-27	6.901097e-23	1.533577e-24
46	7900382	7947894	NM_198700	CELF1	0.822726	5.124328e-27	8.878923e-23	1.930201e-24
47	7900382	8045090	NM_020120	UGGT1	0.822707	5.149660e-27	8.922816e-23	1.898471e-24
48	7900382	7919751	NM_021960	MCL1	0.822018	6.172050e-27	1.069431e-22	2.227981e-24
49	7900382	8084607	NM_021627	SENP2	0.821542	6.991988e-27	1.211502e-22	2.472453e-24
50	7900382	8014825	NM_032875	FBXL20	0.821284	7.478551e-27	1.295809e-22	2.591617e-24

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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