[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id Label1 AccNum GeneSym Info Gene Name
9037 8127364 NR_003660 GUSBL2 link to infopage glucuronidase, beta-like 2
17047 8104621 NR_003660 GUSBL2 link to infopage glucuronidase, beta-like 2

Fetching correlation data, please wait...
Getting list of correlations for id 9037.
Getting list of p-values for id 9037.
1 of 2 done.
Getting list of correlations for id 17047.
Getting list of p-values for id 17047.
2 of 2 done.
Calculating corrections for multiple testing (n=34654), please wait...
Done; whole program took 0.192 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8104621 8112560 AK289851 SMA5 link to infopage 0.997681 4.870957e-122 1.687982e-117 1.687982e-117
2 8104621 8105991 BC171739 GUSBL1 link to infopage 0.996564 2.950433e-113 1.022443e-108 5.112216e-109
3 8104621 8177669 BC171739 GUSBL1 link to infopage 0.994243 9.706355e-102 3.363640e-97 1.121213e-97
4 8104621 8112564 BC171739 GUSBL1 link to infopage 0.970403 2.220296e-65 7.694212e-61 1.923553e-61
5 8104621 8112469 BC171739 GUSBL1 link to infopage 0.969041 2.175722e-64 7.539747e-60 1.507949e-60
6 8104621 8177544 AK289851 SMA5 link to infopage 0.966801 7.508988e-63 2.602165e-58 4.336941e-59
7 8104621 8124469 BC171739 GUSBL1 link to infopage 0.881527 2.380999e-35 8.251115e-31 1.178731e-31
8 8104621 8112491 AK289851 SMA5 link to infopage 0.817558 1.956419e-26 6.779773e-22 8.474717e-23
9 8104621 8105937 AK289851 SMA5 link to infopage 0.811895 8.096386e-26 2.805722e-21 3.117468e-22
10 8127364 7902269 NM_004768 SRSF11 link to infopage 0.746627 6.096590e-20 2.112712e-15 2.112712e-16
11 8127364 8018803 NM_003016 SRSF2 link to infopage 0.735507 4.066859e-19 1.409329e-14 1.281208e-15
12 8127364 7996744 NM_173163 NFATC3 link to infopage 0.719453 5.353056e-18 1.855048e-13 1.545873e-14
13 8127364 8051464 NM_019024 HEATR5B link to infopage 0.719446 5.358234e-18 1.856842e-13 1.428340e-14
14 8127364 8154333 NM_015061 KDM4C link to infopage 0.717464 7.275714e-18 2.521326e-13 1.800947e-14
15 8127364 7913571 NM_001102398 HNRNPR link to infopage 0.711080 1.914612e-17 6.634897e-13 4.423264e-14
16 8127364 8105937 AK289851 SMA5 link to infopage 0.707986 3.031342e-17 1.050481e-12 6.565509e-14
17 8127364 7925978 NM_017782 C10orf18 link to infopage 0.705763 4.201976e-17 1.456153e-12 8.565605e-14
18 8127364 8093191 NM_001098424 DLG1 link to infopage 0.705752 4.208661e-17 1.458469e-12 8.102608e-14
19 8127364 8112491 AK289851 SMA5 link to infopage 0.704595 4.982188e-17 1.726527e-12 9.086986e-14
20 8127364 8023228 NM_017653 DYM link to infopage 0.699368 1.057209e-16 3.663651e-12 1.831826e-13
21 8127364 7974387 NM_145251 STYX link to infopage 0.698111 1.263820e-16 4.379640e-12 2.085543e-13
22 8127364 7944850 NM_032811 TBRG1 link to infopage 0.696910 1.497476e-16 5.189354e-12 2.358797e-13
23 8127364 7915882 NM_014774 KIAA0494 link to infopage 0.694895 1.986989e-16 6.885710e-12 2.993787e-13
24 8127364 8097867 NM_015196 KIAA0922 link to infopage 0.693672 2.356483e-16 8.166155e-12 3.402565e-13
25 8127364 7897890 NM_015378 VPS13D link to infopage 0.693070 2.562232e-16 8.879158e-12 3.551663e-13
26 8127364 7914296 NM_001020658 PUM1 link to infopage 0.689956 3.936135e-16 1.364028e-11 5.246262e-13
27 8127364 8168316 NM_181672 OGT link to infopage 0.689262 4.328455e-16 1.499983e-11 5.555492e-13
28 8127364 7916185 NM_001009881 ZCCHC11 link to infopage 0.688393 4.872996e-16 1.688688e-11 6.031028e-13
29 8127364 8001496 NM_007006 NUDT21 link to infopage 0.686413 6.374145e-16 2.208896e-11 7.616884e-13
30 8127364 8124469 BC171739 GUSBL1 link to infopage 0.686112 6.638400e-16 2.300471e-11 7.668237e-13
31 8127364 8054614 NM_022662 ANAPC1 link to infopage 0.685834 6.892464e-16 2.388515e-11 7.704886e-13
32 8127364 8117476 NM_006994 BTN3A3 link to infopage 0.685625 7.088717e-16 2.456524e-11 7.676637e-13
33 8104621 7900235 NM_012090 MACF1 link to infopage 0.684123 8.673556e-16 3.005734e-11 9.108286e-13
34 8127364 7914791 NM_005066 SFPQ link to infopage 0.683391 9.565356e-16 3.314779e-11 9.749349e-13
35 8127364 8107066 NM_005575 LNPEP link to infopage 0.683134 9.897878e-16 3.430011e-11 9.800030e-13
36 8127364 7929201 NM_003972 BTAF1 link to infopage 0.682733 1.044185e-15 3.618519e-11 1.005144e-12
37 8127364 8096556 NM_015143 METAP1 link to infopage 0.682278 1.109273e-15 3.844076e-11 1.038939e-12
38 8127364 7916443 NM_015306 USP24 link to infopage 0.681662 1.203857e-15 4.171845e-11 1.097854e-12
39 8127364 8008213 NM_007067 MYST2 link to infopage 0.680936 1.325213e-15 4.592392e-11 1.177536e-12
40 8127364 8131709 NM_003112 SP4 link to infopage 0.680754 1.357500e-15 4.704279e-11 1.176070e-12
41 8127364 7910706 NM_006499 LGALS8 link to infopage 0.678950 1.721268e-15 5.964883e-11 1.454850e-12
42 8127364 8083429 NM_021038 MBNL1 link to infopage 0.678901 1.732461e-15 6.003669e-11 1.429445e-12
43 8127364 8142730 NM_176814 ZNF800 link to infopage 0.678485 1.829348e-15 6.339422e-11 1.474284e-12
44 8127364 8052798 NM_014911 AAK1 link to infopage 0.676300 2.432390e-15 8.429205e-11 1.915728e-12
45 8127364 7921625 NM_052931 SLAMF6 link to infopage 0.676203 2.463211e-15 8.536011e-11 1.896891e-12
46 8127364 8096538 NM_001100426 RAP1GDS1 link to infopage 0.675871 2.571518e-15 8.911340e-11 1.937248e-12
47 8127364 8138613 NM_015550 OSBPL3 link to infopage 0.675450 2.715646e-15 9.410798e-11 2.002297e-12
48 8127364 8000192 ENST00000198767 link to infopage 0.675314 2.763543e-15 9.576782e-11 1.995163e-12
49 8127364 7955019 NM_152641 ARID2 link to infopage 0.675155 2.821012e-15 9.775934e-11 1.995089e-12
50 8127364 7951497 NM_002519 NPAT link to infopage 0.674877 2.924141e-15 1.013332e-10 2.026664e-12

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!