[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
16633	226803_at	AK000049	CHMP4C		chromatin modifying protein 4C

Fetching correlation data, please wait...
Getting list of correlations for id 16633.
Getting list of p-values for id 16633.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.128 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	226803_at	223614_at	AL136588	MMP16	0.762122	3.767246e-17	8.708743e-13	8.708743e-13
2	226803_at	204469_at	NM_002851	PTPRZ1	0.719070	1.323784e-14	3.060193e-10	1.530096e-10
3	226803_at	201579_at	NM_005245	FAT1	0.715715	1.996922e-14	4.616285e-10	1.538762e-10
4	226803_at	209032_s_at	AF132811	CADM1	0.713212	2.703321e-14	6.249267e-10	1.562317e-10
5	226803_at	235147_at	R56118		0.696463	1.894332e-13	4.379128e-9	8.758256e-10
6	226803_at	212667_at	AL575922	SPARC	0.692489	2.949241e-13	6.817760e-9	1.136293e-9
7	226803_at	224685_at	AI675354	MLLT4	0.679042	1.252741e-12	2.895962e-8	4.137089e-9
8	226803_at	202421_at	AB007935	IGSF3	0.678574	1.315658e-12	3.041406e-8	3.801758e-9
9	226803_at	211343_s_at	M33653	COL13A1	0.677186	1.520450e-12	3.514824e-8	3.905360e-9
10	226803_at	213909_at	AU147799	LRRC15	0.676827	1.578287e-12	3.648527e-8	3.648527e-9
11	226803_at	227394_at	W94001	NCAM1	0.672581	2.443563e-12	5.648785e-8	5.135259e-9
12	226803_at	204017_at	NM_006855	KDELR3	0.672226	2.533904e-12	5.857625e-8	4.881354e-9
13	226803_at	211809_x_at	M59217	COL13A1	0.672157	2.551767e-12	5.898920e-8	4.537631e-9
14	226803_at	203440_at	M34064	CDH2	0.670954	2.883759e-12	6.666386e-8	4.761704e-9
15	226803_at	220952_s_at	NM_019012	PLEKHA5	0.667978	3.893985e-12	9.001725e-8	6.001150e-9
16	226803_at	205908_s_at	NM_005014	OMD	0.667168	4.222895e-12	9.762066e-8	6.101291e-9
17	226803_at	219304_s_at	NM_025208	PDGFD	0.663506	6.075806e-12	1.404544e-7	8.262023e-9
18	226803_at	229802_at	AA147884		0.662607	6.638176e-12	1.534547e-7	8.525262e-9
19	226803_at	209031_at	AL519710	CADM1	0.661777	7.201477e-12	1.664765e-7	8.761923e-9
20	226803_at	236028_at	BE466675	IBSP	0.660826	7.903122e-12	1.826965e-7	9.134824e-9
21	226803_at	201261_x_at	BC002416	BGN	0.658339	1.006369e-11	2.326422e-7	1.107820e-8
22	226803_at	200665_s_at	NM_003118	SPARC	0.653662	1.575858e-11	3.642910e-7	1.655868e-8
23	226803_at	228640_at	BE644809	PCDH7	0.650946	2.037280e-11	4.709580e-7	2.047644e-8
24	226803_at	235275_at	AA610122	BMP8B	0.649089	2.424654e-11	5.605072e-7	2.335447e-8
25	226803_at	206869_at	NM_001267	CHAD	0.647927	2.702158e-11	6.246578e-7	2.498631e-8
26	226803_at	212488_at	N30339	COL5A1	0.646527	3.076923e-11	7.112923e-7	2.735740e-8
27	226803_at	235874_at	AL574912	PRSS35	0.645118	3.504545e-11	8.101456e-7	3.000539e-8
28	226803_at	226899_at	AK022859	UNC5B	0.644612	3.671249e-11	8.486825e-7	3.031009e-8
29	226803_at	1562403_a_at	AK096553	SLC8A3	0.643079	4.225160e-11	9.767302e-7	3.368035e-8
30	226803_at	225016_at	N48299	APCDD1	0.639296	5.955896e-11	1.376824e-6	4.589415e-8
31	226803_at	227899_at	AI817458	VIT	0.638207	6.568902e-11	1.518533e-6	4.898494e-8
32	226803_at	202450_s_at	NM_000396	CTSK	0.637429	7.043709e-11	1.628294e-6	5.088419e-8
33	226803_at	209875_s_at	M83248	SPP1	0.636625	7.568775e-11	1.749674e-6	5.302041e-8
34	226803_at	213068_at	AI146848	DPT	0.636086	7.940950e-11	1.835709e-6	5.399145e-8
35	226803_at	205907_s_at	AI765819	OMD	0.635668	8.242552e-11	1.905431e-6	5.444088e-8
36	226803_at	213362_at	N73931	PTPRD	0.634540	9.110170e-11	2.105998e-6	5.849995e-8
37	226803_at	229218_at	AA628535	COL1A2	0.633810	9.717957e-11	2.246500e-6	6.071622e-8
38	226803_at	219561_at	NM_016429	COPZ2	0.632803	1.062112e-10	2.455285e-6	6.461275e-8
39	226803_at	209030_s_at	NM_014333	CADM1	0.631923	1.147493e-10	2.652660e-6	6.801693e-8
40	226803_at	203304_at	NM_012342	BAMBI	0.630390	1.312263e-10	3.033558e-6	7.583894e-8
41	226803_at	213905_x_at	AA845258	BGN	0.629655	1.399028e-10	3.234133e-6	7.888129e-8
42	226803_at	202310_s_at	K01228	COL1A1	0.629461	1.422943e-10	3.289418e-6	7.831948e-8
43	226803_at	221730_at	NM_000393	COL5A2	0.628377	1.563326e-10	3.613940e-6	8.404512e-8
44	226803_at	225681_at	AA584310	CTHRC1	0.626941	1.769960e-10	4.091617e-6	9.299131e-8
45	226803_at	212843_at	AA126505	NCAM1	0.625587	1.988418e-10	4.596625e-6	1.021472e-7
46	226803_at	239058_at	BF446723	FOXC2	0.625021	2.087373e-10	4.825380e-6	1.048996e-7
47	226803_at	202283_at	NM_002615	SERPINF1	0.624954	2.099241e-10	4.852815e-6	1.032514e-7
48	226803_at	202404_s_at	NM_000089	COL1A2	0.621680	2.773791e-10	6.412172e-6	1.335869e-7
49	226803_at	235733_at	AW043921		0.620631	3.030736e-10	7.006152e-6	1.429827e-7
50	226803_at	212850_s_at	AA584297	LRP4	0.619944	3.211225e-10	7.423388e-6	1.484678e-7

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation