[Correlation Browser / New Search] [List of best correlations] [List of all variables] [Stats] [Help/About]

Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
4852	204345_at	NM_001856	COL16A1		collagen, type XVI, alpha 1

Fetching correlation data, please wait...
Getting list of correlations for id 4852.
Getting list of p-values for id 4852.
1 of 1 done.
Calculating corrections for multiple testing (n=23117), please wait...
Done; whole program took 0.134 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	204345_at	201438_at	NM_004369	COL6A3	0.778208	3.036735e-18	7.020019e-14	7.020019e-14
2	204345_at	226695_at	AA775472	PRRX1	0.777728	3.283554e-18	7.590592e-14	3.795296e-14
3	204345_at	212233_at	AL523076	MAP1B	0.771269	9.226511e-18	2.132893e-13	7.109642e-14
4	204345_at	200965_s_at	NM_006720	ABLIM1	0.763189	3.207565e-17	7.414929e-13	1.853732e-13
5	204345_at	215076_s_at	AU144167	COL3A1	0.757796	7.170109e-17	1.657514e-12	3.315028e-13
6	204345_at	222433_at	AK025108	ENAH	0.752354	1.581117e-16	3.655069e-12	6.091781e-13
7	204345_at	203477_at	NM_001855	COL15A1	0.749632	2.330487e-16	5.387387e-12	7.696267e-13
8	204345_at	211161_s_at	AF130082	COL3A1	0.748444	2.756332e-16	6.371812e-12	7.964765e-13
9	204345_at	201852_x_at	AI813758	COL3A1	0.747134	3.312717e-16	7.658008e-12	8.508897e-13
10	204345_at	216264_s_at	X79683	LAMB2	0.743123	5.777754e-16	1.335643e-11	1.335643e-12
11	204345_at	227070_at	W63754	GLT8D2	0.742547	6.252598e-16	1.445413e-11	1.314012e-12
12	204345_at	201431_s_at	NM_001387	DPYSL3	0.738781	1.042911e-15	2.410898e-11	2.009082e-12
13	204345_at	200907_s_at	AU157932	PALLD	0.738642	1.062599e-15	2.456410e-11	1.889546e-12
14	204345_at	200771_at	NM_002293	LAMC1	0.738525	1.079432e-15	2.495322e-11	1.782373e-12
15	204345_at	201185_at	NM_002775	HTRA1	0.738247	1.120576e-15	2.590435e-11	1.726957e-12
16	204345_at	225664_at	AA788946	COL12A1	0.736986	1.326666e-15	3.066855e-11	1.916784e-12
17	204345_at	204992_s_at	NM_002628	PFN2	0.736757	1.367852e-15	3.162063e-11	1.860037e-12
18	204345_at	212364_at	BF432550	MYO1B	0.736598	1.397273e-15	3.230076e-11	1.794487e-12
19	204345_at	224928_at	AK024846	SETD7	0.736260	1.461651e-15	3.378899e-11	1.778368e-12
20	204345_at	209200_at	AL536517	MEF2C	0.735336	1.652582e-15	3.820275e-11	1.910137e-12
21	204345_at	213428_s_at	AA292373	COL6A1	0.733546	2.093304e-15	4.839091e-11	2.304329e-12
22	204345_at	201792_at	NM_001129	AEBP1	0.730889	2.962711e-15	6.848899e-11	3.113136e-12
23	204345_at	203083_at	NM_003247	THBS2	0.729659	3.474948e-15	8.033036e-11	3.492625e-12
24	204345_at	223395_at	AB056106	ABI3BP	0.728759	3.902409e-15	9.021200e-11	3.758833e-12
25	204345_at	226769_at	AI802391	FIBIN	0.726732	5.060478e-15	1.169831e-10	4.679323e-12
26	204345_at	204589_at	NM_014840	NUAK1	0.725109	6.220566e-15	1.438008e-10	5.530801e-12
27	204345_at	225450_at	AI433831	AMOTL1	0.724040	7.120454e-15	1.646035e-10	6.096427e-12
28	204345_at	225990_at	W72626	BOC	0.723742	7.393071e-15	1.709056e-10	6.103773e-12
29	204345_at	218284_at	NM_015400	SMAD3	0.721057	1.034746e-14	2.392022e-10	8.248351e-12
30	204345_at	200897_s_at	NM_016081	PALLD	0.718803	1.368052e-14	3.162526e-10	1.054175e-11
31	204345_at	223279_s_at	AF322916	UACA	0.715957	1.938919e-14	4.482200e-10	1.445871e-11
32	204345_at	204517_at	BE962749	PPIC	0.715634	2.016465e-14	4.661462e-10	1.456707e-11
33	204345_at	202598_at	NM_005979	S100A13	0.713404	2.641536e-14	6.106438e-10	1.850436e-11
34	204345_at	224694_at	AF279145	ANTXR1	0.713332	2.664529e-14	6.159593e-10	1.811645e-11
35	204345_at	204037_at	BF055366	LPAR1	0.712873	2.815915e-14	6.509550e-10	1.859871e-11
36	204345_at	219087_at	NM_017680	ASPN	0.711836	3.188729e-14	7.371385e-10	2.047607e-11
37	204345_at	228121_at	AU145950	TGFB2	0.711167	3.453932e-14	7.984456e-10	2.157961e-11
38	204345_at	204797_s_at	NM_004434	EML1	0.710812	3.603524e-14	8.330267e-10	2.192176e-11
39	204345_at	212566_at	AL523310	MAP4	0.708737	4.609266e-14	1.065524e-9	2.732113e-11
40	204345_at	227792_at	AA490685	ITPRIPL2	0.708638	4.663476e-14	1.078056e-9	2.695139e-11
41	204345_at	226930_at	AI345957	FNDC1	0.707493	5.336663e-14	1.233676e-9	3.008967e-11
42	204345_at	1555579_s_at	BC029442	PTPRM	0.706707	5.852147e-14	1.352841e-9	3.221050e-11
43	204345_at	210495_x_at	AF130095	FN1	0.706471	6.016105e-14	1.390743e-9	3.234286e-11
44	204345_at	212535_at	AA142929		0.705583	6.673233e-14	1.542651e-9	3.506026e-11
45	204345_at	211719_x_at	BC005858	FN1	0.705555	6.695206e-14	1.547731e-9	3.439402e-11
46	204345_at	203706_s_at	NM_003507	FZD7	0.705453	6.775792e-14	1.566360e-9	3.405130e-11
47	204345_at	218980_at	NM_025135	FHOD3	0.702929	9.078281e-14	2.098626e-9	4.465162e-11
48	204345_at	204036_at	AW269335	LPAR1	0.702729	9.289497e-14	2.147453e-9	4.473861e-11
49	204345_at	226380_at	N21442	PTPN21	0.702455	9.587003e-14	2.216228e-9	4.522913e-11
50	204345_at	212922_s_at	AI809870	SMYD2	0.702196	9.877453e-14	2.283371e-9	4.566741e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
Restrict output to	miRs, Transcription factors? (Empty: No restrictions.)
	with keyword:
	KEGG Pathway:
Limit output to	rows.
Remove	"self correlations", i.e. correlations of a variable with itself
Sort results by	positive, negative or absolute value of correlation