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Correlations in the bone dataset

Use the form to search for:

an EntrezGene ID (e.g. "1234")
an Accession Number (e.g. "BE644809" or "NM_005715")
a Gene Symbol (e.g. "HMGCR" or "ZNF532", not case-sensitive)
a variable label (e.g. "1562529_s_at" or "hsa-miR-29c*")
a variable number (e.g. "#1234" for the 1234^th variable in the dataset)

(View the full list of available key terms [here]).

Starting timer.
Connected to database.
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 2 variables:
id	Label1	AccNum	GeneSym	Info	Gene Name
191	1553681_a_at	NM_005041	PRF1		perforin 1 (pore forming protein)
10075	214617_at	AI445650	PRF1		perforin 1 (pore forming protein)

Fetching correlation data, please wait...
Getting list of correlations for id 191.
Getting list of p-values for id 191.
1 of 2 done.
Getting list of correlations for id 10075.
Getting list of p-values for id 10075.
2 of 2 done.
Calculating corrections for multiple testing (n=46234), please wait...
Done; whole program took 0.183 seconds. Transmitting 50 results:

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	214617_at	1553681_a_at	NM_005041	PRF1	0.717377	1.630078e-14	7.536501e-10	7.536501e-10
2	1553681_a_at	214617_at	AI445650	PRF1	0.717377	1.630078e-14	7.536501e-10	3.768250e-10
3	214617_at	206118_at	NM_003151	STAT4	0.624561	2.171186e-10	1.003826e-5	3.346088e-6
4	214617_at	236782_at	AI129628	SAMD3	0.621537	2.807686e-10	1.298106e-5	3.245264e-6
5	214617_at	205488_at	NM_006144	GZMA	0.620461	3.074536e-10	1.421481e-5	2.842962e-6
6	214617_at	1405_i_at	M21121	CCL5	0.612659	5.879351e-10	2.718259e-5	4.530432e-6
7	214617_at	205831_at	NM_001767	CD2	0.609048	7.889789e-10	3.647765e-5	5.211093e-6
8	1553681_a_at	204103_at	NM_002984	CCL4	0.596686	2.101009e-9	9.713807e-5	1.214226e-5
9	1553681_a_at	1555759_a_at	AF043341	CCL5	0.596651	2.106765e-9	9.740417e-5	1.082269e-5
10	214617_at	204655_at	NM_002985	CCL5	0.596312	2.162822e-9	9.999589e-5	9.999589e-6
11	214617_at	213906_at	AW592266	MYBL1	0.591873	3.042461e-9	1.406651e-4	1.278774e-5
12	214617_at	204103_at	NM_002984	CCL4	0.591315	3.174644e-9	1.467765e-4	1.223137e-5
13	214617_at	231776_at	NM_005442	EOMES	0.556095	3.981450e-8	1.840784e-3	1.415987e-4
14	214617_at	1569225_a_at	BC021582	SCML4	0.551618	5.378941e-8	2.486900e-3	1.776357e-4
15	214617_at	205821_at	NM_007360	KLRK1	0.547586	7.026432e-8	3.248600e-3	2.165734e-4
16	214617_at	240413_at	AI827431	PYHIN1	0.542951	9.511329e-8	4.397468e-3	2.748417e-4
17	1553681_a_at	205456_at	NM_000733	CD3E	0.539386	1.196944e-7	5.533953e-3	3.255266e-4
18	1553681_a_at	43934_at	AA479495	GPR137	0.538540	1.263558e-7	5.841932e-3	3.245518e-4
19	214617_at	220684_at	NM_013351	TBX21	0.537305	1.367128e-7	6.320780e-3	3.326726e-4
20	214617_at	205790_at	NM_003726	SKAP1	0.535291	1.553492e-7	7.182417e-3	3.591209e-4
21	1553681_a_at	205033_s_at	NM_004084		-0.534779	1.604569e-7	7.418566e-3	3.532651e-4
22	1553681_a_at	33814_at	AF005046	PAK4	0.527601	2.511582e-7	1.161205e-2	5.278203e-4
23	214617_at	210031_at	J04132	CD247	0.527137	2.584583e-7	1.194956e-2	5.195462e-4
24	1553681_a_at	1553103_at	NM_147134	NFX1	-0.524205	3.093725e-7	1.430353e-2	5.959804e-4
25	214617_at	1561942_x_at	BC043252		0.520885	3.784425e-7	1.749691e-2	6.998765e-4
26	214617_at	1554208_at	BC032248	MEI1	0.520157	3.954411e-7	1.828282e-2	7.031855e-4
27	1553681_a_at	218198_at	NM_018180	DHX32	-0.518942	4.254019e-7	1.966803e-2	7.284456e-4
28	1553681_a_at	1554119_at	BC010099	C16orf57	0.518444	4.383162e-7	2.026511e-2	7.237539e-4
29	1553681_a_at	211113_s_at	U34919	ABCG1	0.516285	4.986232e-7	2.305335e-2	7.949429e-4
30	214617_at	218506_x_at	NM_018459	GLYR1	0.515809	5.129429e-7	2.371540e-2	7.905133e-4
31	214617_at	210321_at	M36118	GZMH	0.515106	5.347944e-7	2.472569e-2	7.976028e-4
32	1553681_a_at	1557986_s_at	BU508042	SMCR8	0.515071	5.358834e-7	2.477603e-2	7.742510e-4
33	214617_at	213958_at	AW134823	CD6	0.513530	5.870298e-7	2.714073e-2	8.224465e-4
34	1553681_a_at	1559754_at	BC018898	LTB	0.512395	6.276092e-7	2.901688e-2	8.534377e-4
35	214617_at	1556919_at	BC035120	LEPR	0.510962	6.826185e-7	3.156018e-2	9.017195e-4
36	214617_at	204891_s_at	NM_005356	LCK	0.510244	7.118686e-7	3.291253e-2	9.142370e-4
37	214617_at	206087_x_at	NM_000410	HFE	0.509639	7.374139e-7	3.409359e-2	9.214484e-4
38	1553681_a_at	240413_at	AI827431	PYHIN1	0.509305	7.519051e-7	3.476358e-2	9.148310e-4
39	1553681_a_at	242966_x_at	AW341515		-0.507642	8.281141e-7	3.828703e-2	9.817186e-4
40	1553681_a_at	212700_x_at	AJ002220		0.507123	8.533368e-7	3.945317e-2	9.863294e-4
41	214617_at	48612_at	AA225490	N4BP1	0.505617	9.307453e-7	4.303208e-2	1.049563e-3
42	1553681_a_at	210915_x_at	M15564	TRBC1	0.504397	9.982638e-7	4.615373e-2	1.098898e-3
43	214617_at	212070_at	AL554008	GPR56	0.503746	1.036188e-6	4.790711e-2	1.114119e-3
44	214617_at	1555759_a_at	AF043341	CCL5	0.503649	1.041932e-6	4.817270e-2	1.094834e-3
45	1553681_a_at	1561937_x_at	M74303		0.503142	1.072567e-6	4.958908e-2	1.101980e-3
46	214617_at	227900_at	AV701750	CBLB	0.502112	1.137341e-6	5.258384e-2	1.143127e-3
47	1553681_a_at	205488_at	NM_006144	GZMA	0.501600	1.170977e-6	5.413896e-2	1.151893e-3
48	1553681_a_at	205291_at	NM_000878	IL2RB	0.501363	1.186817e-6	5.487131e-2	1.143152e-3
49	1553681_a_at	37145_at	M85276	GNLY	0.499358	1.329342e-6	6.146078e-2	1.254302e-3
50	1553681_a_at	396_f_at	X97671	EPOR	0.498707	1.379001e-6	6.375674e-2	1.275135e-3

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser 2.0: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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