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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 12695.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
12695 7981771 ENST00000410537 link to infopage

Fetching correlation data, please wait...
Getting list of correlations for id 12695.
Getting list of p-values for id 12695.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.099 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7981771 7981893 ENST00000410537 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 7981771 7981909 ENST00000458920 link to infopage 0.879797 4.799648e-35 8.316350e-31 4.158175e-31
3 7981771 7982152 ENST00000410928 link to infopage 0.865718 9.934370e-33 1.721328e-28 5.737761e-29
4 7981771 7986661 ENST00000410928 link to infopage 0.865718 9.934370e-33 1.721328e-28 4.303321e-29
5 7981771 7986943 ENST00000410928 link to infopage 0.865718 9.934370e-33 1.721328e-28 3.442656e-29
6 7981771 7992845 NM_003456 ZNF205 link to infopage 0.811911 8.064169e-26 1.397279e-21 2.328798e-22
7 7981771 8090770 link to infopage 0.773331 4.156477e-22 7.201928e-18 1.028847e-18
8 7981771 8043283 NM_018433 KDM3A link to infopage -0.769992 8.044608e-22 1.393889e-17 1.742362e-18
9 7981771 8090044 NM_001031702 SEMA5B link to infopage 0.764219 2.454832e-21 4.253487e-17 4.726097e-18
10 7981771 8038299 NM_033142 CGB7 link to infopage 0.763736 2.690879e-21 4.662487e-17 4.662487e-18
11 7981771 7992460 NM_001099456 NPW link to infopage 0.763484 2.823230e-21 4.891811e-17 4.447101e-18
12 7981771 8098421 ENST00000410927 link to infopage 0.759343 6.146663e-21 1.065032e-16 8.875269e-18
13 7981771 8012344 NM_032580 HES7 link to infopage 0.758979 6.576943e-21 1.139587e-16 8.766053e-18
14 7981771 7923628 NM_198447 GOLT1A link to infopage 0.758933 6.633098e-21 1.149317e-16 8.209406e-18
15 7981771 8148517 NM_001702 BAI1 link to infopage 0.758557 7.112082e-21 1.232310e-16 8.215403e-18
16 7981771 7929840 NM_003987 PAX2 link to infopage 0.755390 1.273147e-20 2.205982e-16 1.378739e-17
17 7981771 8152148 NM_015902 UBR5 link to infopage -0.754900 1.392059e-20 2.412020e-16 1.418836e-17
18 7981771 8134737 NM_203397 MBLAC1 link to infopage 0.752429 2.177346e-20 3.772688e-16 2.095938e-17
19 7981771 8008723 NM_000502 EPX link to infopage 0.751566 2.541992e-20 4.404510e-16 2.318163e-17
20 7981771 8060604 NM_000915 OXT link to infopage 0.751521 2.562839e-20 4.440631e-16 2.220316e-17
21 7981771 8100902 NM_032217 ANKRD17 link to infopage -0.750781 2.925524e-20 5.069055e-16 2.413836e-17
22 7981771 7937560 NM_002457 MUC2 link to infopage 0.750722 2.956295e-20 5.122373e-16 2.328351e-17
23 7981771 8093112 NM_015562 UBXN7 link to infopage -0.748162 4.655834e-20 8.067164e-16 3.507463e-17
24 7981771 8038280 NM_000737 CGB link to infopage 0.747472 5.256707e-20 9.108296e-16 3.795123e-17
25 7981771 8138474 NM_198956 SP8 link to infopage 0.747073 5.638470e-20 9.769777e-16 3.907911e-17
26 7981771 7936762 NM_001001976 ATE1 link to infopage -0.746494 6.240961e-20 1.081371e-15 4.159121e-17
27 7981771 8141648 NM_015831 ACHE link to infopage 0.746302 6.453813e-20 1.118252e-15 4.141675e-17
28 7981771 8156783 NM_001855 COL15A1 link to infopage 0.746154 6.622348e-20 1.147454e-15 4.098051e-17
29 7981771 8121209 NM_005604 POU3F2 link to infopage 0.745768 7.084014e-20 1.227447e-15 4.232576e-17
30 7981771 8100070 NM_198353 KCTD8 link to infopage 0.745677 7.197257e-20 1.247069e-15 4.156896e-17
31 7981771 8079021 NM_001904 CTNNB1 link to infopage -0.745398 7.555177e-20 1.309085e-15 4.222856e-17
32 7981771 7996027 NM_002996 CX3CL1 link to infopage 0.745092 7.969081e-20 1.380803e-15 4.315008e-17
33 7981771 8111216 ENST00000426411 link to infopage 0.741909 1.380130e-19 2.391351e-15 7.246518e-17
34 7981771 7920766 NM_018489 ASH1L link to infopage -0.740822 1.661812e-19 2.879422e-15 8.468888e-17
35 7981771 8003758 NM_000430 PAFAH1B1 link to infopage -0.740760 1.679483e-19 2.910040e-15 8.314400e-17
36 7981771 8110821 NM_001044 SLC6A3 link to infopage 0.740637 1.715007e-19 2.971593e-15 8.254426e-17
37 7981771 7997264 NM_001906 CTRB1 link to infopage 0.739609 2.042166e-19 3.538461e-15 9.563408e-17
38 7981771 8031489 NM_033113 ZNF628 link to infopage 0.739445 2.099919e-19 3.638530e-15 9.575079e-17
39 7981771 8123891 ENST00000410451 link to infopage 0.739156 2.205176e-19 3.820908e-15 9.797199e-17
40 7981771 7944285 NM_001655 ARCN1 link to infopage -0.738942 2.286383e-19 3.961616e-15 9.904039e-17
41 7981771 8152477 NM_006265 RAD21 link to infopage -0.738428 2.493303e-19 4.320147e-15 1.053694e-16
42 7981771 7978718 NM_006364 SEC23A link to infopage -0.737871 2.738518e-19 4.745030e-15 1.129769e-16
43 7981771 7980463 NM_012245 SNW1 link to infopage -0.736888 3.229636e-19 5.595990e-15 1.301393e-16
44 7981771 8151149 NM_006421 ARFGEF1 link to infopage -0.736730 3.316173e-19 5.745932e-15 1.305894e-16
45 7981771 8091048 NR_023350 COPB2 link to infopage -0.736457 3.471123e-19 6.014414e-15 1.336536e-16
46 7981771 7968260 NM_145657 GSX1 link to infopage 0.736413 3.496458e-19 6.058313e-15 1.317025e-16
47 7981771 8030187 NM_033043 CGB5 link to infopage 0.734673 4.670471e-19 8.092526e-15 1.721814e-16
48 7981771 7935535 NM_018058 CRTAC1 link to infopage 0.734626 4.707155e-19 8.156088e-15 1.699185e-16
49 7981771 8030448 NM_001136052 CPT1C link to infopage 0.734179 5.068903e-19 8.782889e-15 1.792426e-16
50 7981771 7920744 NM_000298 PKLR link to infopage 0.734162 5.082936e-19 8.807203e-15 1.761441e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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