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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 13720.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
13720 8178358 NM_002714 PPP1R10 link to infopage protein phosphatase 1, regulatory (inhibitor) subunit 10

Fetching correlation data, please wait...
Getting list of correlations for id 13720.
Getting list of p-values for id 13720.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.102 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8178358 8179664 NM_002714 PPP1R10 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8178358 8124756 NM_002714 PPP1R10 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 8178358 7953569 NM_080549 PTPN6 link to infopage 0.815707 3.128864e-26 5.421382e-22 1.807127e-22
4 8178358 7905700 NM_014847 UBAP2L link to infopage 0.795512 3.815193e-24 6.610586e-20 1.652646e-20
5 8178358 8115783 NM_005990 STK10 link to infopage 0.780394 9.904072e-23 1.716079e-18 3.432157e-19
6 8178358 8167069 NM_003334 UBA1 link to infopage 0.779299 1.241166e-22 2.150568e-18 3.584280e-19
7 8178358 7913001 NM_020765 UBR4 link to infopage 0.778987 1.323335e-22 2.292943e-18 3.275633e-19
8 8178358 7905631 NM_023015 INTS3 link to infopage 0.770428 7.384474e-22 1.279508e-17 1.599385e-18
9 8178358 8079950 NM_002070 GNAI2 link to infopage 0.767017 1.435132e-21 2.486652e-17 2.762947e-18
10 8178358 8011542 NM_015113 ZZEF1 link to infopage 0.764496 2.328691e-21 4.034923e-17 4.034923e-18
11 8178358 8108330 NM_016604 KDM3B link to infopage 0.764377 2.382162e-21 4.127572e-17 3.752339e-18
12 8178358 8158783 NM_005085 NUP214 link to infopage 0.753152 1.911195e-20 3.311527e-16 2.759606e-17
13 8178358 7996976 NM_007014 WWP2 link to infopage 0.752016 2.344946e-20 4.063088e-16 3.125452e-17
14 8178358 7941243 NM_006268 DPF2 link to infopage 0.750261 3.209418e-20 5.560958e-16 3.972113e-17
15 8178358 8078091 NM_003298 NR2C2 link to infopage 0.747923 4.856276e-20 8.414469e-16 5.609646e-17
16 8178358 7964203 NM_013449 BAZ2A link to infopage 0.747512 5.220210e-20 9.045058e-16 5.653161e-17
17 8178358 7934733 NM_145869 ANXA11 link to infopage 0.746897 5.814908e-20 1.007549e-15 5.926760e-17
18 8178358 7905258 NM_001145415 SETDB1 link to infopage 0.746753 5.963586e-20 1.033311e-15 5.740615e-17
19 8178358 8061685 NM_014742 TM9SF4 link to infopage 0.746730 5.987841e-20 1.037513e-15 5.460596e-17
20 8178358 7980189 NM_001039479 KIAA0317 link to infopage 0.742508 1.245453e-19 2.157996e-15 1.078998e-16
21 8178358 8005903 NM_003170 SUPT6H link to infopage 0.741738 1.421068e-19 2.462284e-15 1.172516e-16
22 8178358 8146285 NM_152419 HGSNAT link to infopage 0.740823 1.661515e-19 2.878907e-15 1.308594e-16
23 8178358 8076465 NM_032311 POLDIP3 link to infopage 0.740613 1.721952e-19 2.983626e-15 1.297229e-16
24 8178358 8162236 NM_006378 SEMA4D link to infopage 0.739034 2.251125e-19 3.900524e-15 1.625218e-16
25 8178358 8009164 NM_005828 DCAF7 link to infopage 0.738970 2.275449e-19 3.942671e-15 1.577068e-16
26 8178358 7970287 NM_005561 LAMP1 link to infopage 0.733318 5.842050e-19 1.012252e-14 3.893277e-16
27 8178358 8026638 NM_004145 MYO9B link to infopage 0.733237 5.920739e-19 1.025886e-14 3.799579e-16
28 8178358 8073345 NM_001429 EP300 link to infopage 0.730033 9.996474e-19 1.732089e-14 6.186032e-16
29 8178358 7998825 NM_002613 PDPK1 link to infopage 0.729106 1.161619e-18 2.012738e-14 6.940476e-16
30 8178358 8066716 NM_133171 ELMO2 link to infopage 0.726685 1.714632e-18 2.970942e-14 9.903142e-16
31 8178358 8034762 NM_002730 PRKACA link to infopage 0.725953 1.927114e-18 3.339110e-14 1.077132e-15
32 8178358 7906576 NM_015331 NCSTN link to infopage 0.725825 1.966842e-18 3.407947e-14 1.064983e-15
33 8178358 8115261 NM_015621 CCDC69 link to infopage 0.725420 2.097671e-18 3.634635e-14 1.101404e-15
34 8178358 7913169 NM_004930 CAPZB link to infopage 0.725197 2.173631e-18 3.766250e-14 1.107721e-15
35 8178358 7999044 NM_004380 CREBBP link to infopage 0.724000 2.627471e-18 4.552619e-14 1.300748e-15
36 8178358 7952557 NM_003139 SRPR link to infopage 0.723350 2.911287e-18 5.044386e-14 1.401218e-15
37 8178358 8172827 NM_004187 KDM5C link to infopage 0.723326 2.922419e-18 5.063675e-14 1.368561e-15
38 8178358 8024111 NM_004368 CNN2 link to infopage 0.722374 3.394401e-18 5.881479e-14 1.547758e-15
39 8178358 8110289 NM_022455 NSD1 link to infopage 0.722213 3.481126e-18 6.031748e-14 1.546602e-15
40 8178358 8013696 NM_014680 KIAA0100 link to infopage 0.720361 4.648640e-18 8.054699e-14 2.013675e-15
41 8178358 7947681 NM_004308 ARHGAP1 link to infopage 0.720201 4.766404e-18 8.258747e-14 2.014329e-15
42 8178358 8167965 NM_002444 MSN link to infopage 0.719863 5.022888e-18 8.703158e-14 2.072181e-15
43 8178358 7925851 NM_014023 WDR37 link to infopage 0.718537 6.167335e-18 1.068614e-13 2.485149e-15
44 8178358 8119582 NM_015349 KIAA0240 link to infopage 0.716610 8.293012e-18 1.436930e-13 3.265750e-15
45 8178358 8156321 NM_003177 SYK link to infopage 0.715909 9.231290e-18 1.599506e-13 3.554457e-15
46 8178358 8053909 NM_014014 SNRNP200 link to infopage 0.715691 9.544331e-18 1.653746e-13 3.595100e-15
47 8178358 8077550 NM_001077525 MTMR14 link to infopage 0.715616 9.653554e-18 1.672671e-13 3.558875e-15
48 8178358 7959927 NM_004592 SFRS8 link to infopage 0.714823 1.089170e-17 1.887204e-13 3.931675e-15
49 8178358 8009183 NM_203351 MAP3K3 link to infopage 0.714681 1.112854e-17 1.928243e-13 3.935189e-15
50 8178358 7956593 NM_006812 OS9 link to infopage 0.713069 1.420212e-17 2.460802e-13 4.921604e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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