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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 14327.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
14327 8045887 NR_002822 MGC72080 link to infopage MGC72080 pseudogene

Fetching correlation data, please wait...
Getting list of correlations for id 14327.
Getting list of p-values for id 14327.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.107 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8045887 7971241 NR_002822 MGC72080 link to infopage 0.996844 3.689542e-115 6.392870e-111 6.392870e-111
2 8045887 7968787 NR_002822 MGC72080 link to infopage 0.995881 3.260398e-109 5.649291e-105 2.824645e-105
3 8045887 7945873 NR_002822 MGC72080 link to infopage 0.959912 1.040443e-58 1.802775e-54 6.009249e-55
4 8045887 8082248 NR_002822 MGC72080 link to infopage 0.955165 2.940755e-56 5.095446e-52 1.273861e-52
5 8045887 8156319 NR_002822 MGC72080 link to infopage 0.954843 4.215587e-56 7.304347e-52 1.460869e-52
6 8045887 8082244 NR_002822 MGC72080 link to infopage 0.874742 3.506106e-34 6.075030e-30 1.012505e-30
7 8045887 8138145 NR_002822 MGC72080 link to infopage 0.853582 6.200008e-31 1.074275e-26 1.534679e-27
8 8045887 8042574 NR_002822 MGC72080 link to infopage 0.843007 1.695810e-29 2.938330e-25 3.672912e-26
9 8045887 7928306 ENST00000363300 link to infopage 0.830776 5.817122e-28 1.007933e-23 1.119925e-24
10 8045887 8092095 NM_015028 TNIK link to infopage 0.816652 2.463990e-26 4.269355e-22 4.269355e-23
11 8045887 7948113 NR_027688 OR7E5P link to infopage 0.807528 2.344158e-25 4.061723e-21 3.692475e-22
12 8045887 8054054 NM_025190 ANKRD36B link to infopage 0.793022 6.645360e-24 1.151442e-19 9.595346e-21
13 8045887 8168316 NM_181672 OGT link to infopage 0.792002 8.323041e-24 1.442133e-19 1.109333e-20
14 8045887 8139896 NR_022007 PMS2L4 link to infopage 0.787896 2.034165e-23 3.524598e-19 2.517570e-20
15 8045887 8092035 NM_024947 PHC3 link to infopage 0.787665 2.137857e-23 3.704265e-19 2.469510e-20
16 8045887 8014551 NM_007247 SYNRG link to infopage 0.784360 4.323476e-23 7.491286e-19 4.682054e-20
17 8045887 8082086 NM_001113523 PARP15 link to infopage 0.782909 5.866351e-23 1.016463e-18 5.979192e-20
18 8045887 8130116 NM_004690 LATS1 link to infopage 0.781732 7.502266e-23 1.299918e-18 7.221765e-20
19 8045887 7994565 NM_018427 RRN3 link to infopage 0.780449 9.792194e-23 1.696693e-18 8.929965e-20
20 8045887 8059413 NM_014689 DOCK10 link to infopage 0.779975 1.079893e-22 1.871131e-18 9.355654e-20
21 8045887 8133531 NR_027775 PMS2L5 link to infopage 0.779921 1.092022e-22 1.892147e-18 9.010225e-20
22 8045887 8000200 NM_018427 RRN3 link to infopage 0.778433 1.482707e-22 2.569086e-18 1.167766e-19
23 8045887 8109507 NM_005546 ITK link to infopage 0.775849 2.507753e-22 4.345184e-18 1.889210e-19
24 8045887 7938683 NR_002822 MGC72080 link to infopage 0.773898 3.711565e-22 6.431029e-18 2.679596e-19
25 8045887 8111455 NR_003504 GUSBL1 link to infopage 0.773775 3.803714e-22 6.590696e-18 2.636278e-19
26 8045887 7925364 NM_018072 HEATR1 link to infopage 0.773444 4.063546e-22 7.040906e-18 2.708041e-19
27 8045887 7969794 AY358798 LOC100132099 link to infopage 0.771940 5.480170e-22 9.495490e-18 3.516848e-19
28 8045887 8140258 NR_027775 PMS2L5 link to infopage 0.771085 6.488208e-22 1.124212e-17 4.015042e-19
29 8045887 8112558 NR_003504 GUSBL1 link to infopage 0.769952 8.107690e-22 1.404819e-17 4.844205e-19
30 8045887 8000167 NM_015092 SMG1 link to infopage 0.769530 8.805301e-22 1.525694e-17 5.085648e-19
31 8045887 8133754 NR_023383 PMS2L11 link to infopage 0.769391 9.047472e-22 1.567655e-17 5.056953e-19
32 8045887 7944223 NM_005933 MLL link to infopage 0.768384 1.101138e-21 1.907941e-17 5.962317e-19
33 8045887 8116297 NM_005520 HNRNPH1 link to infopage 0.767828 1.226622e-21 2.125367e-17 6.440507e-19
34 8045887 8020630 NM_153211 TTC39C link to infopage 0.767055 1.424822e-21 2.468789e-17 7.261143e-19
35 8045887 8133914 NR_024549 DMTF1 link to infopage 0.766294 1.649926e-21 2.858826e-17 8.168074e-19
36 8045887 7962516 NM_030674 SLC38A1 link to infopage 0.765560 1.899750e-21 3.291696e-17 9.143601e-19
37 8045887 7926565 NM_004641 MLLT10 link to infopage 0.764892 2.158804e-21 3.740560e-17 1.010962e-18
38 8045887 8074925 NR_024448 LOC91316 link to infopage 0.764599 2.283063e-21 3.955863e-17 1.041016e-18
39 8045887 8140280 NR_003614 PMS2L2 link to infopage 0.764206 2.461071e-21 4.264298e-17 1.093410e-18
40 8045887 8133309 NR_027775 PMS2L5 link to infopage 0.763645 2.738022e-21 4.744170e-17 1.186042e-18
41 8045887 7971246 NM_015058 KIAA0564 link to infopage 0.763294 2.926733e-21 5.071150e-17 1.236866e-18
42 8045887 8053834 NM_025190 ANKRD36B link to infopage 0.762555 3.366192e-21 5.832600e-17 1.388714e-18
43 8045887 8140269 NR_027775 PMS2L5 link to infopage 0.761101 4.426192e-21 7.669262e-17 1.783549e-18
44 8045887 8140239 NR_003613 PMS2L1 link to infopage 0.760288 5.153533e-21 8.929527e-17 2.029438e-18
45 8045887 8135902 NR_027330 C7orf54 link to infopage 0.760070 5.368121e-21 9.301343e-17 2.066965e-18
46 8045887 7969881 NM_003291 TPP2 link to infopage 0.759619 5.838625e-21 1.011659e-16 2.199258e-18
47 8045887 7908732 NM_018085 IPO9 link to infopage 0.759567 5.895463e-21 1.021507e-16 2.173419e-18
48 8045887 7994006 NM_015092 SMG1 link to infopage 0.759552 5.911457e-21 1.024278e-16 2.133913e-18
49 8045887 7981943 NR_022008 PAR5 link to infopage 0.759267 6.233489e-21 1.080077e-16 2.204238e-18
50 8045887 8000638 NM_015092 SMG1 link to infopage 0.759174 6.342101e-21 1.098896e-16 2.197792e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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