[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
User requested variable id 15265.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
15265	8171029	NM_012151	F8A1		coagulation factor VIII-associated (intronic transcript) 1

Fetching correlation data, please wait...
Getting list of correlations for id 15265.
Getting list of p-values for id 15265.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.066 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8171029	8170998	NM_012151	F8A1	0.993316	2.058405e-98	3.566598e-94	3.566598e-94
2	8171029	8176245	NM_012151	F8A1	0.971854	1.729703e-66	2.997057e-62	1.498528e-62
3	8171029	8087833	NM_001947	DUSP7	0.614211	3.210298e-12	5.562483e-8	1.854161e-8
4	8171029	8049689	NM_018226	RNPEPL1	0.601193	1.192719e-11	2.066624e-7	5.166559e-8
5	8171029	8038078	NM_006801	KDELR1	0.595750	2.029296e-11	3.516162e-7	7.032324e-8
6	8171029	8019263	NM_004309	ARHGDIA	0.583748	6.327817e-11	1.096421e-6	1.827368e-7
7	8171029	8026564	NM_016270	KLF2	0.577810	1.092062e-10	1.892216e-6	2.703166e-7
8	8171029	8027778	NM_144779	FXYD5	0.576279	1.254836e-10	2.174255e-6	2.717819e-7
9	8171029	8048304	NM_021198	CTDSP1	0.573469	1.616387e-10	2.800714e-6	3.111904e-7
10	8171029	8012000	NM_001004333	RNASEK	0.572421	1.775253e-10	3.075981e-6	3.075981e-7
11	8171029	7992905	NM_001083601	NAT15	0.571884	1.862469e-10	3.227100e-6	2.933727e-7
12	8171029	8173444	NM_000206	IL2RG	0.569580	2.285507e-10	3.960097e-6	3.300081e-7
13	8171029	8133690	NM_005918	MDH2	0.565644	3.230596e-10	5.597654e-6	4.305888e-7
14	8171029	8124798	NM_133471	KIAA1949	0.563000	4.065755e-10	7.044734e-6	5.031953e-7
15	8171029	8175844	NM_174869	IDH3G	0.561886	4.476591e-10	7.756589e-6	5.171059e-7
16	8171029	8137225	NM_013400	REPIN1	0.560542	5.025409e-10	8.707527e-6	5.442204e-7
17	8171029	8133192	NM_017994	C7orf42	0.559849	5.333289e-10	9.240989e-6	5.435876e-7
18	8171029	8005994	NM_005702	ERAL1	0.557457	6.540999e-10	1.133359e-5	6.296438e-7
19	8171029	8062981	NM_015937	PIGT	0.555487	7.729258e-10	1.339248e-5	7.048676e-7
20	8171029	8033207	NM_024898	DENND1C	0.552074	1.029423e-9	1.783681e-5	8.918406e-7
21	8171029	8040753	NM_017727	TMEM214	0.551068	1.119548e-9	1.939841e-5	9.237338e-7
22	8171029	8012197	NM_020360	PLSCR3	0.546975	1.570286e-9	2.720834e-5	1.236743e-6
23	8171029	8060705	NM_020746	MAVS	0.544800	1.876167e-9	3.250834e-5	1.413406e-6
24	8171029	7984871	NM_004383	CSK	0.544043	1.995316e-9	3.457284e-5	1.440535e-6
25	8171029	7992205	NM_194259	UBE2I	0.543593	2.069764e-9	3.586279e-5	1.434512e-6
26	8171029	7906671	NM_001014443	USP21	0.540976	2.557383e-9	4.431178e-5	1.704299e-6
27	8171029	8125373	NM_022107	GPSM3	0.535027	4.109668e-9	7.120822e-5	2.637342e-6
28	8171029	8179987	NM_022107	GPSM3	0.535027	4.109668e-9	7.120822e-5	2.543151e-6
29	8171029	8043666	NM_017623	CNNM3	0.533313	4.703745e-9	8.150178e-5	2.810406e-6
30	8171029	7955331	NM_003076	SMARCD1	0.532044	5.195684e-9	9.002561e-5	3.000854e-6
31	8171029	8074003	NM_025204	TRABD	0.531407	5.460392e-9	9.461221e-5	3.052007e-6
32	8171029	7941136	NM_013265	C11orf2	0.524162	9.548106e-9	1.654400e-4	5.170001e-6
33	8171029	8070701	NM_000100	CSTB	0.523749	9.853757e-9	1.707360e-4	5.173819e-6
34	8171029	8024219	NM_001687	ATP5D	0.520551	1.255389e-8	2.175212e-4	6.397683e-6
35	8171029	8035445	NM_005354	JUND	0.519008	1.409801e-8	2.442763e-4	6.979322e-6
36	8171029	8101622	NM_138501	TECR	0.518847	1.426890e-8	2.472372e-4	6.867700e-6
37	8171029	8012376	NM_014232	VAMP2	0.517958	1.525025e-8	2.642412e-4	7.141653e-6
38	8171029	8051814	NM_006887	ZFP36L2	0.517131	1.622085e-8	2.810587e-4	7.396281e-6
39	8171029	8071392	NM_001003891	MED15	0.516791	1.663664e-8	2.882630e-4	7.391360e-6
40	8171029	7949465	NM_021975	RELA	0.516025	1.761269e-8	3.051750e-4	7.629376e-6
41	8171029	7896917	NM_001029885	GLTPD1	0.513129	2.181545e-8	3.779963e-4	9.219422e-6
42	8171029	8075910	NM_002872	RAC2	0.507219	3.355822e-8	5.814634e-4	1.384437e-5
43	8171029	7899870	NM_152493	ZNF362	0.502867	4.584481e-8	7.943530e-4	1.847332e-5
44	8171029	8107096	ENST00000324151		0.502805	4.604828e-8	7.978785e-4	1.813360e-5
45	8171029	8110327	NM_006480	RGS14	0.502201	4.806851e-8	8.328831e-4	1.850851e-5
46	8171029	8178727	NM_004381	ATF6B	0.501368	5.099474e-8	8.835858e-4	1.920839e-5
47	8171029	7990417	NM_005697	SCAMP2	0.499966	5.630533e-8	9.756025e-4	2.075750e-5
48	8171029	7911862	NM_020710	LRRC47	0.499904	5.655386e-8	9.799087e-4	2.041477e-5
49	8171029	8077804	NM_014760	TATDN2	0.499894	5.659116e-8	9.805550e-4	2.001133e-5
50	8171029	7953699	NM_018416	FOXJ2	0.499240	5.926013e-8	1.026800e-3	2.053601e-5

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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