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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 16529.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
16529 7919133 NM_001017986 FCGR1B link to infopage Fc fragment of IgG, high affinity Ib, receptor (CD64)

Fetching correlation data, please wait...
Getting list of correlations for id 16529.
Getting list of p-values for id 16529.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.104 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7919133 7905060 NM_000566 FCGR1A link to infopage 0.998294 6.641824e-129 1.150829e-124 1.150829e-124
2 7919133 7905047 NM_000566 FCGR1A link to infopage 0.988691 1.065602e-86 1.846368e-82 9.231841e-83
3 7919133 7917532 NM_004120 GBP2 link to infopage 0.841306 2.822878e-29 4.891201e-25 1.630400e-25
4 7919133 7917576 NM_052942 GBP5 link to infopage 0.821666 6.768195e-27 1.172725e-22 2.931813e-23
5 7919133 8090018 NM_031458 PARP9 link to infopage 0.812580 6.835728e-26 1.184427e-21 2.368853e-22
6 7919133 7917516 NM_002053 GBP1 link to infopage 0.803266 6.444642e-25 1.116663e-20 1.861105e-21
7 7919133 8154233 NM_014143 CD274 link to infopage 0.801109 1.065359e-24 1.845948e-20 2.637069e-21
8 7919133 8009502 NM_000891 KCNJ2 link to infopage 0.798970 1.743136e-24 3.020331e-20 3.775414e-21
9 7919133 8057744 NM_007315 STAT1 link to infopage 0.794510 4.774715e-24 8.273148e-20 9.192387e-21
10 7919133 7934898 NM_144590 ANKRD22 link to infopage 0.787466 2.231469e-23 3.866466e-19 3.866466e-20
11 7919133 8023043 NM_024430 PSTPIP2 link to infopage 0.783121 5.611036e-23 9.722243e-19 8.838403e-20
12 7919133 7917530 AL832451 link to infopage 0.780949 8.828649e-23 1.529740e-18 1.274783e-19
13 7919133 7983512 NM_021199 SQRDL link to infopage 0.759376 6.109069e-21 1.058518e-16 8.142449e-18
14 7919133 7921434 NM_004833 AIM2 link to infopage 0.755811 1.178955e-20 2.042775e-16 1.459125e-17
15 7919133 8114010 NM_002198 IRF1 link to infopage 0.752765 2.049430e-20 3.551047e-16 2.367365e-17
16 7919133 7958828 NM_001143906 TRAFD1 link to infopage 0.745649 7.232213e-20 1.253126e-15 7.832035e-17
17 7919133 8075720 NM_030882 APOL2 link to infopage 0.741146 1.572468e-19 2.724616e-15 1.602715e-16
18 7919133 8166632 NM_001128127 GK link to infopage 0.740089 1.882587e-19 3.261959e-15 1.812200e-16
19 7919133 7967322 NM_006018 GPR109B link to infopage 0.734914 4.487530e-19 7.775542e-15 4.092391e-16
20 7919133 7951385 NM_004347 CASP5 link to infopage 0.729173 1.149124e-18 1.991087e-14 9.955433e-16
21 7919133 8059361 NM_020830 WDFY1 link to infopage 0.724528 2.416812e-18 4.187610e-14 1.994100e-15
22 7919133 7951397 NM_033292 CASP1 link to infopage 0.721873 3.671776e-18 6.362087e-14 2.891858e-15
23 7919133 7951372 NM_033306 CASP4 link to infopage 0.718701 6.013323e-18 1.041928e-13 4.530124e-15
24 7919133 8091327 NM_021105 PLSCR1 link to infopage 0.718628 6.081555e-18 1.053751e-13 4.390629e-15
25 7919133 8072735 NM_145343 APOL1 link to infopage 0.718381 6.317266e-18 1.094593e-13 4.378371e-15
26 7919133 8174474 NM_022977 ACSL4 link to infopage 0.717635 7.087313e-18 1.228019e-13 4.723149e-15
27 7919133 8122457 NM_003764 STX11 link to infopage 0.717403 7.344398e-18 1.272564e-13 4.713199e-15
28 7919133 8072710 NM_030641 APOL6 link to infopage 0.717131 7.657609e-18 1.326834e-13 4.738692e-15
29 7919133 8048752 NM_022915 MRPL44 link to infopage 0.716982 7.834696e-18 1.357518e-13 4.681096e-15
30 7919133 8082075 NM_138287 DTX3L link to infopage 0.713785 1.274744e-17 2.208748e-13 7.362494e-15
31 7919133 7951413 NM_001007232 CARD17 link to infopage 0.713711 1.289063e-17 2.233559e-13 7.205029e-15
32 7919133 8042391 NM_002664 PLEK link to infopage 0.707586 3.215477e-17 5.571457e-13 1.741080e-14
33 7919133 8113130 NM_024717 MCTP1 link to infopage 0.707509 3.252492e-17 5.635593e-13 1.707755e-14
34 7919133 8174103 NM_001128127 GK link to infopage 0.706201 3.941065e-17 6.828683e-13 2.008436e-14
35 7919133 7932867 NM_001143770 ZNF438 link to infopage 0.705572 4.320773e-17 7.486604e-13 2.139030e-14
36 7919133 8068583 NM_002243 KCNJ15 link to infopage 0.705390 4.437438e-17 7.688749e-13 2.135763e-14
37 7919133 8027862 NM_005306 FFAR2 link to infopage 0.704114 5.343111e-17 9.258008e-13 2.502164e-14
38 7919133 7973618 NM_006084 IRF9 link to infopage 0.703162 6.133259e-17 1.062710e-12 2.796605e-14
39 7919133 8130556 NM_001024465 SOD2 link to infopage 0.701744 7.525372e-17 1.303921e-12 3.343388e-14
40 7919133 7902850 NM_198460 GBP6 link to infopage 0.701733 7.537395e-17 1.306004e-12 3.265011e-14
41 7919133 8131957 NM_013322 SNX10 link to infopage 0.700586 8.884710e-17 1.539454e-12 3.754765e-14
42 7919133 8178867 NM_000593 TAP1 link to infopage 0.699293 1.068562e-16 1.851498e-12 4.408328e-14
43 7919133 8125512 NM_000593 TAP1 link to infopage 0.699293 1.068562e-16 1.851498e-12 4.305809e-14
44 7919133 8180061 NM_000593 TAP1 link to infopage 0.699293 1.068562e-16 1.851498e-12 4.207949e-14
45 7919133 7973564 NM_176783 PSME1 link to infopage 0.698963 1.119976e-16 1.940582e-12 4.312404e-14
46 7919133 7995697 NM_017839 LPCAT2 link to infopage 0.698847 1.138442e-16 1.972579e-12 4.288215e-14
47 7919133 8044919 NM_002881 RALB link to infopage 0.697548 1.368527e-16 2.371247e-12 5.045207e-14
48 7919133 7922474 NM_014656 KIAA0040 link to infopage 0.697456 1.386599e-16 2.402561e-12 5.005334e-14
49 7919133 8019486 NM_003004 SECTM1 link to infopage 0.697209 1.435613e-16 2.487487e-12 5.076505e-14
50 7919133 8166065 NM_138636 TLR8 link to infopage 0.695590 1.802772e-16 3.123662e-12 6.247325e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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