[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 7122.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
7122 8178582 NR_003673 LY6G6E link to infopage lymphocyte antigen 6 complex, locus G6E

Fetching correlation data, please wait...
Getting list of correlations for id 7122.
Getting list of p-values for id 7122.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.113 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8178582 8179810 NR_003673 LY6G6E link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8178582 8125038 NR_003673 LY6G6E link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 8178582 8125805 NM_000841 GRM4 link to infopage 0.721471 3.910025e-18 6.774900e-14 2.258300e-14
4 8178582 7999433 ENST00000390926 link to infopage 0.708718 2.720572e-17 4.713935e-13 1.178484e-13
5 8178582 8069148 NM_198695 KRTAP10-8 link to infopage 0.702754 6.505868e-17 1.127272e-12 2.254543e-13
6 8178582 8086540 NM_020208 SLC6A20 link to infopage 0.698288 1.232455e-16 2.135474e-12 3.559123e-13
7 8178582 8070786 NM_198688 KRTAP10-6 link to infopage 0.697878 1.306277e-16 2.263387e-12 3.233410e-13
8 8178582 8075705 link to infopage 0.693178 2.524103e-16 4.373514e-12 5.466892e-13
9 8178582 8114550 NM_004883 NRG2 link to infopage 0.690601 3.603118e-16 6.243123e-12 6.936803e-13
10 8178582 8049166 NM_005199 CHRNG link to infopage 0.690205 3.804007e-16 6.591202e-12 6.591202e-13
11 8178582 8013042 NM_000422 KRT17 link to infopage 0.688719 4.661603e-16 8.077160e-12 7.342873e-13
12 8178582 8159036 NM_139025 ADAMTS13 link to infopage 0.684443 8.309069e-16 1.439712e-11 1.199760e-12
13 8178582 7977203 NM_001080464 ASPG link to infopage 0.683300 9.682211e-16 1.677637e-11 1.290490e-12
14 8178582 8037732 NM_001029861 NANOS2 link to infopage 0.682487 1.078970e-15 1.869531e-11 1.335379e-12
15 8178582 8153838 NM_004260 RECQL4 link to infopage 0.680788 1.351441e-15 2.341642e-11 1.561095e-12
16 8178582 8144685 link to infopage 0.679728 1.554012e-15 2.692637e-11 1.682898e-12
17 8178582 8015323 NM_153490 KRT13 link to infopage 0.679569 1.587008e-15 2.749808e-11 1.617534e-12
18 8178582 8067409 NM_005560 LAMA5 link to infopage 0.677682 2.031855e-15 3.520595e-11 1.955886e-12
19 8178582 7899528 NM_000911 OPRD1 link to infopage 0.677667 2.035826e-15 3.527475e-11 1.856566e-12
20 8178582 8029458 NM_001039213 CEACAM16 link to infopage 0.677408 2.105826e-15 3.648765e-11 1.824383e-12
21 8178582 8019031 NM_019020 TBC1D16 link to infopage 0.677343 2.123628e-15 3.679611e-11 1.752196e-12
22 8178582 8031344 AY366242 KIR2DL2 link to infopage 0.677195 2.165196e-15 3.751636e-11 1.705289e-12
23 8178582 8170412 NM_005364 MAGEA8 link to infopage 0.676635 2.328601e-15 4.034767e-11 1.754247e-12
24 8178582 7991939 NM_145294 WDR90 link to infopage 0.675348 2.751535e-15 4.767584e-11 1.986493e-12
25 8178582 8164562 NM_199350 C9orf50 link to infopage 0.675187 2.809449e-15 4.867932e-11 1.947173e-12
26 8178582 8015206 NM_001123387 KRTAP2-1 link to infopage 0.675171 2.815135e-15 4.877785e-11 1.876071e-12
27 8178582 8013465 NM_005557 KRT16 link to infopage 0.674750 2.972432e-15 5.150333e-11 1.907531e-12
28 8178582 7897066 NR_024445 LOC100128003 link to infopage 0.673663 3.418801e-15 5.923757e-11 2.115628e-12
29 8178582 8087145 NM_001407 CELSR3 link to infopage 0.671397 4.568213e-15 7.915343e-11 2.729429e-12
30 8178582 7928823 NM_001030015 OPN4 link to infopage 0.671258 4.650138e-15 8.057294e-11 2.685765e-12
31 8178582 8175815 NM_001039582 PNCK link to infopage 0.670766 4.949970e-15 8.576812e-11 2.766714e-12
32 8178582 8137151 NM_198455 SSPO link to infopage 0.669970 5.476012e-15 9.488285e-11 2.965089e-12
33 8178582 8015208 NM_001123387 KRTAP2-1 link to infopage 0.669879 5.539783e-15 9.598782e-11 2.908722e-12
34 8178582 8135099 NM_133457 EMID2 link to infopage 0.669637 5.712024e-15 9.897224e-11 2.910948e-12
35 8178582 8069142 NM_198687 KRTAP10-4 link to infopage 0.669404 5.882670e-15 1.019290e-10 2.912258e-12
36 8178582 7981538 NM_002226 JAG2 link to infopage 0.669382 5.898705e-15 1.022069e-10 2.839079e-12
37 8178582 8110169 NM_014613 FAF2 link to infopage -0.668917 6.255527e-15 1.083895e-10 2.929446e-12
38 8178582 8125383 NM_004557 NOTCH4 link to infopage 0.667893 7.116194e-15 1.233023e-10 3.244797e-12
39 8178582 8005433 ENST00000423944 link to infopage 0.667808 7.192700e-15 1.246279e-10 3.195587e-12
40 8178582 8079896 NM_004186 SEMA3F link to infopage 0.667684 7.305712e-15 1.265861e-10 3.164652e-12
41 8178582 8046922 NM_000090 COL3A1 link to infopage 0.666282 8.706797e-15 1.508627e-10 3.679577e-12
42 8178582 7896882 NM_001130413 SCNN1D link to infopage 0.665884 9.149922e-15 1.585407e-10 3.774779e-12
43 8178582 8053728 NM_000798 DRD5 link to infopage 0.664788 1.048734e-14 1.817141e-10 4.225910e-12
44 8178582 8030582 NM_001145809 MYH14 link to infopage 0.663546 1.223002e-14 2.119096e-10 4.816127e-12
45 8178582 8004802 NM_017622 C17orf59 link to infopage 0.663172 1.280860e-14 2.219345e-10 4.931878e-12
46 8178582 7948470 NM_004778 GPR44 link to infopage 0.662689 1.359398e-14 2.355428e-10 5.120496e-12
47 8178582 8037422 NM_001031749 LYPD5 link to infopage 0.662287 1.428430e-14 2.475041e-10 5.266044e-12
48 8178582 7948997 NM_015459 ATL3 link to infopage -0.662230 1.438513e-14 2.492512e-10 5.192733e-12
49 8178582 7940857 NM_006819 STIP1 link to infopage -0.662103 1.461128e-14 2.531696e-10 5.166727e-12
50 8178582 8050253 ENST00000383906 link to infopage 0.662059 1.469026e-14 2.545381e-10 5.090763e-12

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!