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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
2900 8033054 NM_000149 FUT3 link to infopage fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)

Fetching correlation data, please wait...
Getting list of correlations for id 2900.
Getting list of p-values for id 2900.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.128 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8033054 8067409 NM_005560 LAMA5 link to infopage 0.778364 1.503641e-22 2.605358e-18 2.605358e-18
2 8033054 7897132 NM_022114 PRDM16 link to infopage 0.773181 4.282565e-22 7.420400e-18 3.710200e-18
3 8033054 7977216 NM_015656 KIF26A link to infopage 0.771617 5.841012e-22 1.012072e-17 3.373574e-18
4 8033054 7952752 NM_007037 ADAMTS8 link to infopage 0.770629 7.097870e-22 1.229848e-17 3.074620e-18
5 8033054 8092888 NM_138399 TMEM44 link to infopage 0.769632 8.631563e-22 1.495591e-17 2.991182e-18
6 8033054 8159670 NM_006647 NOXA1 link to infopage 0.766950 1.453906e-21 2.519183e-17 4.198638e-18
7 8033054 7937560 NM_002457 MUC2 link to infopage 0.759695 5.756477e-21 9.974247e-17 1.424892e-17
8 8033054 8049942 NM_080741 NEU4 link to infopage 0.759642 5.813488e-21 1.007303e-16 1.259129e-17
9 8033054 8179716 NM_001264 CDSN link to infopage 0.755759 1.190149e-20 2.062171e-16 2.291301e-17
10 8033054 7945688 NR_003512 INS-IGF2 link to infopage 0.752928 1.989942e-20 3.447973e-16 3.447973e-17
11 8033054 8064059 NM_020882 COL20A1 link to infopage 0.751827 2.425955e-20 4.203453e-16 3.821321e-17
12 8033054 8153101 NM_152888 COL22A1 link to infopage 0.751760 2.455193e-20 4.254113e-16 3.545094e-17
13 8033054 8061944 BC137111 C20orf134 link to infopage 0.750157 3.269481e-20 5.665030e-16 4.357715e-17
14 8033054 8024712 NM_033064 ATCAY link to infopage 0.747962 4.822535e-20 8.356007e-16 5.968576e-17
15 8033054 8170562 NM_175742 MAGEA2 link to infopage 0.746993 5.718617e-20 9.908648e-16 6.605765e-17
16 8033054 7992302 NM_020825 CRAMP1L link to infopage 0.746445 6.294054e-20 1.090571e-15 6.816067e-17
17 8033054 8038109 NM_017708 FAM83E link to infopage 0.745408 7.542394e-20 1.306871e-15 7.687474e-17
18 8033054 8153322 NM_015193 ARC link to infopage 0.744824 8.348403e-20 1.446528e-15 8.036265e-17
19 8033054 8175732 NM_175742 MAGEA2 link to infopage 0.744125 9.423714e-20 1.632847e-15 8.593932e-17
20 8033054 7996027 NM_002996 CX3CL1 link to infopage 0.743648 1.023401e-19 1.773247e-15 8.866235e-17
21 8033054 8170553 NM_175868 MAGEA6 link to infopage 0.742126 1.329843e-19 2.304219e-15 1.097247e-16
22 8033054 8124862 NM_001264 CDSN link to infopage 0.740865 1.649507e-19 2.858100e-15 1.299136e-16
23 8033054 8064111 NM_032957 RTEL1 link to infopage 0.740741 1.684883e-19 2.919397e-15 1.269303e-16
24 8033054 8026735 NM_133644 GTPBP3 link to infopage 0.740385 1.790055e-19 3.101629e-15 1.292345e-16
25 8033054 8175747 NM_005362 MAGEA3 link to infopage 0.739991 1.913914e-19 3.316240e-15 1.326496e-16
26 8033054 8039524 NM_152600 ZNF579 link to infopage 0.738845 2.324020e-19 4.026830e-15 1.548781e-16
27 8033054 8033487 NM_032447 FBN3 link to infopage 0.738347 2.527596e-19 4.379566e-15 1.622062e-16
28 8033054 8178442 NM_001264 CDSN link to infopage 0.737420 2.954095e-19 5.118561e-15 1.828057e-16
29 8033054 8075934 NM_014550 CARD10 link to infopage 0.736751 3.304674e-19 5.726009e-15 1.974486e-16
30 8033054 8028407 NM_000540 RYR1 link to infopage 0.736442 3.479689e-19 6.029257e-15 2.009752e-16
31 8033054 8032312 NM_138813 ATP8B3 link to infopage 0.736350 3.533652e-19 6.122760e-15 1.975084e-16
32 8033054 8007259 ENST00000225928 link to infopage 0.735429 4.119607e-19 7.138043e-15 2.230638e-16
33 8033054 7950921 NM_001143831 GRM5 link to infopage 0.735409 4.133235e-19 7.161657e-15 2.170199e-16
34 8033054 7992140 ENST00000455256 link to infopage 0.734667 4.675204e-19 8.100726e-15 2.382566e-16
35 8033054 7897089 NM_014638 PLCH2 link to infopage 0.733976 5.241581e-19 9.082087e-15 2.594882e-16
36 8033054 8176149 NM_139250 CTAG1A link to infopage 0.733193 5.963671e-19 1.033325e-14 2.870348e-16
37 8033054 8170965 NM_139250 CTAG1A link to infopage 0.733193 5.963671e-19 1.033325e-14 2.792771e-16
38 8033054 7896761 NM_152486 SAMD11 link to infopage 0.732649 6.522257e-19 1.130112e-14 2.973978e-16
39 8033054 8076747 AK123383 LOC642648 link to infopage 0.731801 7.494791e-19 1.298622e-14 3.329801e-16
40 8033054 8012344 NM_032580 HES7 link to infopage 0.731149 8.337102e-19 1.444570e-14 3.611424e-16
41 8033054 8032465 NM_144616 JSRP1 link to infopage 0.729666 1.061050e-18 1.838481e-14 4.484099e-16
42 8033054 7935983 NM_005029 PITX3 link to infopage 0.728501 1.280839e-18 2.219310e-14 5.284071e-16
43 8033054 8090044 NM_001031702 SEMA5B link to infopage 0.728460 1.289455e-18 2.234238e-14 5.195902e-16
44 8033054 8008228 NM_138281 DLX4 link to infopage 0.728260 1.331497e-18 2.307086e-14 5.243376e-16
45 8033054 8125568 NM_080680 COL11A2 link to infopage 0.728001 1.388191e-18 2.405319e-14 5.345154e-16
46 8033054 7922590 AK125993 NCRNA00083 link to infopage 0.727926 1.405089e-18 2.434598e-14 5.292605e-16
47 8033054 8009096 NM_000789 ACE link to infopage 0.727592 1.482487e-18 2.568705e-14 5.465330e-16
48 8033054 8155083 NM_001216 CA9 link to infopage 0.726777 1.689410e-18 2.927241e-14 6.098419e-16
49 8033054 8036890 NM_020956 PRX link to infopage 0.726667 1.719591e-18 2.979535e-14 6.080684e-16
50 8033054 7987701 NM_016642 SPTBN5 link to infopage 0.726493 1.767978e-18 3.063376e-14 6.126752e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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