[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
1488 7905406 NM_020770 CGN link to infopage cingulin

Fetching correlation data, please wait...
Getting list of correlations for id 1488.
Getting list of p-values for id 1488.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.131 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 7905406 8080128 NM_000839 GRM2 link to infopage 0.701561 7.725665e-17 1.338626e-12 1.338626e-12
2 7905406 7970262 NM_001008895 CUL4A link to infopage -0.699034 1.108726e-16 1.921090e-12 9.605449e-13
3 7905406 8015554 NM_012285 KCNH4 link to infopage 0.692864 2.636318e-16 4.567949e-12 1.522650e-12
4 7905406 8019331 NM_001145113 MYADML2 link to infopage 0.689225 4.350489e-16 7.538092e-12 1.884523e-12
5 7905406 8179716 NM_001264 CDSN link to infopage 0.686625 6.193973e-16 1.073230e-11 2.146459e-12
6 7905406 8071745 NM_182520 C22orf15 link to infopage 0.686220 6.542378e-16 1.133598e-11 1.889330e-12
7 7905406 8153101 NM_152888 COL22A1 link to infopage 0.682424 1.088001e-15 1.885180e-11 2.693114e-12
8 7905406 8087907 NM_020163 SEMA3G link to infopage 0.680390 1.424346e-15 2.467964e-11 3.084955e-12
9 7905406 8051187 NM_022823 FNDC4 link to infopage 0.679680 1.563971e-15 2.709893e-11 3.010992e-12
10 7905406 7958724 ENST00000331096 link to infopage 0.677957 1.960131e-15 3.396319e-11 3.396319e-12
11 7905406 7937728 NM_001145829 TNNI2 link to infopage 0.676787 2.283271e-15 3.956224e-11 3.596567e-12
12 7905406 8038280 NM_000737 CGB link to infopage 0.675383 2.739071e-15 4.745989e-11 3.954990e-12
13 7905406 7931519 NM_152643 KNDC1 link to infopage 0.674295 3.151899e-15 5.461295e-11 4.200996e-12
14 7905406 8062796 NM_024034 GDAP1L1 link to infopage 0.667202 7.761026e-15 1.344753e-10 9.605379e-12
15 7905406 8032829 NM_001080400 PLIN4 link to infopage 0.666479 8.495375e-15 1.471994e-10 9.813291e-12
16 7905406 8013384 NM_000691 ALDH3A1 link to infopage 0.665894 9.139384e-15 1.583581e-10 9.897381e-12
17 7905406 7925813 NR_027152 C10orf108 link to infopage 0.665695 9.368428e-15 1.623267e-10 9.548632e-12
18 7905406 8032770 NM_016539 SIRT6 link to infopage 0.665158 1.001640e-14 1.735542e-10 9.641901e-12
19 7905406 8042119 NM_022894 PAPOLG link to infopage -0.664419 1.097770e-14 1.902106e-10 1.001108e-11
20 7905406 8084219 NM_017644 KLHL24 link to infopage -0.664332 1.109697e-14 1.922772e-10 9.613860e-12
21 7905406 7987701 NM_016642 SPTBN5 link to infopage 0.664251 1.120893e-14 1.942171e-10 9.248432e-12
22 7905406 7946860 NM_000352 ABCC8 link to infopage 0.664137 1.136869e-14 1.969853e-10 8.953876e-12
23 7905406 7928915 NM_001099338 FAM22A link to infopage 0.663584 1.217292e-14 2.109202e-10 9.170442e-12
24 7905406 8036460 NM_004647 DPF1 link to infopage 0.663523 1.226514e-14 2.125181e-10 8.854922e-12
25 7905406 7913450 NM_005529 HSPG2 link to infopage 0.663223 1.272846e-14 2.205461e-10 8.821842e-12
26 7905406 8038319 NM_002152 HRC link to infopage 0.663193 1.277576e-14 2.213656e-10 8.514063e-12
27 7905406 8028407 NM_000540 RYR1 link to infopage 0.663046 1.300982e-14 2.254212e-10 8.348934e-12
28 7905406 8046922 NM_000090 COL3A1 link to infopage 0.662810 1.339318e-14 2.320637e-10 8.287989e-12
29 7905406 8038725 NM_002776 KLK10 link to infopage 0.661418 1.589225e-14 2.753650e-10 9.495346e-12
30 7905406 8170716 NM_005393 PLXNB3 link to infopage 0.660980 1.676743e-14 2.905292e-10 9.684306e-12
31 7905406 8118498 NM_000500 CYP21A2 link to infopage 0.660970 1.678797e-14 2.908852e-10 9.383395e-12
32 7905406 7910265 NM_001098623 OBSCN link to infopage 0.660078 1.871993e-14 3.243602e-10 1.013626e-11
33 7905406 8156415 NM_006648 WNK2 link to infopage 0.659609 1.982118e-14 3.434416e-10 1.040732e-11
34 7905406 8136080 NM_005631 SMO link to infopage 0.658616 2.236187e-14 3.874641e-10 1.139600e-11
35 7905406 7933312 NM_001098845 ANXA8L1 link to infopage 0.658567 2.249555e-14 3.897804e-10 1.113658e-11
36 7905406 7947991 NM_015231 NUP160 link to infopage -0.657808 2.465990e-14 4.272820e-10 1.186895e-11
37 7905406 7931439 NM_006426 DPYSL4 link to infopage 0.657674 2.506271e-14 4.342616e-10 1.173680e-11
38 7905406 8124862 NM_001264 CDSN link to infopage 0.657568 2.538678e-14 4.398768e-10 1.157570e-11
39 7905406 7924342 NM_018713 SLC30A10 link to infopage 0.657505 2.558157e-14 4.432518e-10 1.136543e-11
40 7905406 8060126 NM_198998 AQP12A link to infopage 0.657275 2.630179e-14 4.557311e-10 1.139328e-11
41 7905406 7916654 NM_181712 KANK4 link to infopage 0.657086 2.690614e-14 4.662027e-10 1.137080e-11
42 7905406 8178177 NM_000500 CYP21A2 link to infopage 0.657032 2.708267e-14 4.692614e-10 1.117289e-11
43 7905406 8179440 NM_000500 CYP21A2 link to infopage 0.657032 2.708267e-14 4.692614e-10 1.091306e-11
44 7905406 7897974 NM_001080830 PRAMEF12 link to infopage 0.656794 2.787057e-14 4.829133e-10 1.097530e-11
45 7905406 8055476 NR_024058 YWHAE link to infopage -0.656005 3.064605e-14 5.310042e-10 1.180009e-11
46 7905406 8030187 NM_033043 CGB5 link to infopage 0.655180 3.383096e-14 5.861890e-10 1.274324e-11
47 7905406 8060134 NM_004321 KIF1A link to infopage 0.655097 3.416744e-14 5.920193e-10 1.259615e-11
48 7905406 8034747 ENST00000343945 link to infopage 0.654574 3.637350e-14 6.302437e-10 1.313008e-11
49 7905406 8112121 NM_173514 SLC38A9 link to infopage -0.654515 3.662937e-14 6.346772e-10 1.295260e-11
50 7905406 8115691 NM_003062 SLIT3 link to infopage 0.654442 3.694834e-14 6.402039e-10 1.280408e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!