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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
4593 8153167 NM_016601 KCNK9 link to infopage potassium channel, subfamily K, member 9

Fetching correlation data, please wait...
Getting list of correlations for id 4593.
Getting list of p-values for id 4593.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.153 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8153167 7998724 NM_020764 CASKIN1 link to infopage 0.769172 9.443679e-22 1.636306e-17 1.636306e-17
2 8153167 7990683 NM_015162 ACSBG1 link to infopage 0.763488 2.820830e-21 4.887652e-17 2.443826e-17
3 8153167 7922823 NM_025191 EDEM3 link to infopage -0.758607 7.046514e-21 1.220949e-16 4.069832e-17
4 8153167 8125568 NM_080680 COL11A2 link to infopage 0.757383 8.834435e-21 1.530742e-16 3.826856e-17
5 8153167 7992845 NM_003456 ZNF205 link to infopage 0.756009 1.136956e-20 1.970004e-16 3.940008e-17
6 8153167 8030448 NM_001136052 CPT1C link to infopage 0.753069 1.939981e-20 3.361406e-16 5.602343e-17
7 8153167 8153828 NM_003923 FOXH1 link to infopage 0.752549 2.130875e-20 3.692167e-16 5.274525e-17
8 8153167 7935983 NM_005029 PITX3 link to infopage 0.752503 2.148497e-20 3.722701e-16 4.653376e-17
9 8153167 7955305 NM_001652 AQP6 link to infopage 0.752287 2.233487e-20 3.869962e-16 4.299958e-17
10 8153167 7937560 NM_002457 MUC2 link to infopage 0.752043 2.333866e-20 4.043889e-16 4.043889e-17
11 8153167 8038577 NM_001024656 ASPDH link to infopage 0.751804 2.436119e-20 4.221064e-16 3.837331e-17
12 8153167 7913450 NM_005529 HSPG2 link to infopage 0.749501 3.673760e-20 6.365524e-16 5.304604e-17
13 8153167 8064394 ENST00000217256 link to infopage 0.745980 6.826576e-20 1.182841e-15 9.098776e-17
14 8153167 8079021 NM_001904 CTNNB1 link to infopage -0.745294 7.694040e-20 1.333146e-15 9.522474e-17
15 8153167 8036072 NM_207392 KRTDAP link to infopage 0.744949 8.169564e-20 1.415540e-15 9.436936e-17
16 8153167 8025237 NM_001080429 KIAA1543 link to infopage 0.743557 1.039578e-19 1.801277e-15 1.125798e-16
17 8153167 8053872 NM_001002036 ASTL link to infopage 0.742093 1.337255e-19 2.317061e-15 1.362977e-16
18 8153167 8042335 NM_003375 VDAC2 link to infopage -0.740024 1.903502e-19 3.298199e-15 1.832333e-16
19 8153167 8121209 NM_005604 POU3F2 link to infopage 0.739729 2.000990e-19 3.467116e-15 1.824798e-16
20 8153167 8100902 NM_032217 ANKRD17 link to infopage -0.738842 2.325062e-19 4.028635e-15 2.014318e-16
21 8153167 7992147 NM_021098 CACNA1H link to infopage 0.738577 2.431367e-19 4.212830e-15 2.006109e-16
22 8153167 8163548 NM_138424 KIF12 link to infopage 0.738151 2.612682e-19 4.526995e-15 2.057725e-16
23 8153167 8028407 NM_000540 RYR1 link to infopage 0.737610 2.861287e-19 4.957751e-15 2.155544e-16
24 8153167 7972899 BX647655 DKFZp451A211 link to infopage 0.737223 3.053296e-19 5.290445e-15 2.204352e-16
25 8153167 7937667 NM_003957 BRSK2 link to infopage 0.736488 3.453172e-19 5.983311e-15 2.393324e-16
26 8153167 7931097 NM_002775 HTRA1 link to infopage 0.735787 3.881113e-19 6.724804e-15 2.586463e-16
27 8153167 7914103 NM_001029882 AHDC1 link to infopage 0.735677 3.952923e-19 6.849230e-15 2.536752e-16
28 8153167 7912520 NM_002521 NPPB link to infopage 0.735132 4.328333e-19 7.499702e-15 2.678465e-16
29 8153167 7966234 NM_021625 TRPV4 link to infopage 0.735054 4.384705e-19 7.597379e-15 2.619786e-16
30 8153167 8007154 NM_021939 FKBP10 link to infopage 0.734870 4.520412e-19 7.832517e-15 2.610839e-16
31 8153167 7997264 NM_001906 CTRB1 link to infopage 0.734624 4.708274e-19 8.158026e-15 2.631621e-16
32 8153167 8042537 NM_001692 ATP6V1B1 link to infopage 0.734168 5.077629e-19 8.798008e-15 2.749377e-16
33 8153167 7997801 NM_013278 IL17C link to infopage 0.733362 5.800454e-19 1.005045e-14 3.045590e-16
34 8153167 8096556 NM_015143 METAP1 link to infopage -0.733037 6.119431e-19 1.060314e-14 3.118570e-16
35 8153167 7936762 NM_001001976 ATE1 link to infopage -0.733022 6.134185e-19 1.062870e-14 3.036772e-16
36 8153167 8032312 NM_138813 ATP8B3 link to infopage 0.732621 6.551859e-19 1.135241e-14 3.153446e-16
37 8153167 8060660 NM_052970 HSPA12B link to infopage 0.732309 6.896524e-19 1.194961e-14 3.229624e-16
38 8153167 7918313 NM_001010985 MYBPHL link to infopage 0.731657 7.673043e-19 1.329508e-14 3.498706e-16
39 8153167 7992271 NM_016111 TELO2 link to infopage 0.731459 7.925855e-19 1.373313e-14 3.521315e-16
40 8153167 8155569 BC119675 FAM27E3 link to infopage 0.731037 8.491029e-19 1.471241e-14 3.678101e-16
41 8153167 8161426 BC119675 FAM27E3 link to infopage 0.731037 8.491029e-19 1.471241e-14 3.588392e-16
42 8153167 8161437 BC119675 FAM27E3 link to infopage 0.731037 8.491029e-19 1.471241e-14 3.502954e-16
43 8153167 8163599 NM_015404 DFNB31 link to infopage 0.730878 8.713121e-19 1.509723e-14 3.510983e-16
44 8153167 8026735 NM_133644 GTPBP3 link to infopage 0.730782 8.850439e-19 1.533516e-14 3.485263e-16
45 8153167 8065580 NM_080611 DUSP15 link to infopage 0.730593 9.127833e-19 1.581580e-14 3.514622e-16
46 8153167 8075200 NM_012265 RHBDD3 link to infopage 0.730578 9.149176e-19 1.585278e-14 3.446256e-16
47 8153167 8016168 NM_133373 PLCD3 link to infopage 0.730233 9.677000e-19 1.676734e-14 3.567519e-16
48 8153167 7927367 NM_001040084 ANXA8 link to infopage 0.729894 1.022566e-18 1.771801e-14 3.691251e-16
49 8153167 7977203 NM_001080464 ASPG link to infopage 0.728958 1.189741e-18 2.061465e-14 4.207071e-16
50 8153167 8001449 NM_024336 IRX3 link to infopage 0.728064 1.374370e-18 2.381370e-14 4.762741e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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