[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
5941	8038770	NM_022046	KLK14		kallikrein-related peptidase 14

Fetching correlation data, please wait...
Getting list of correlations for id 5941.
Getting list of p-values for id 5941.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.147 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8038770	7914667	NM_052896	CSMD2	0.763151	3.006809e-21	5.209898e-17	5.209898e-17
2	8038770	7937560	NM_002457	MUC2	0.755740	1.194449e-20	2.069622e-16	1.034811e-16
3	8038770	7936762	NM_001001976	ATE1	-0.753637	1.750706e-20	3.033447e-16	1.011149e-16
4	8038770	7903632	NM_001408	CELSR2	0.749813	3.475518e-20	6.022030e-16	1.505507e-16
5	8038770	7986960	NM_015307	FAM189A1	0.748071	4.730900e-20	8.197231e-16	1.639446e-16
6	8038770	7897066	NR_024445	LOC100128003	0.745007	8.087319e-20	1.401290e-15	2.335483e-16
7	8038770	7934367	NM_004034	ANXA7	-0.741846	1.395147e-19	2.417371e-15	3.453387e-16
8	8038770	7896921	NM_152228	TAS1R3	0.740812	1.664674e-19	2.884381e-15	3.605476e-16
9	8038770	8024373	NM_001039846	IZUMO4	0.737515	2.907281e-19	5.037446e-15	5.597162e-16
10	8038770	7927367	NM_001040084	ANXA8	0.734466	4.833148e-19	8.374395e-15	8.374395e-16
11	8038770	7936108	NM_001001412	CALHM1	0.732426	6.765465e-19	1.172252e-14	1.065684e-15
12	8038770	8096556	NM_015143	METAP1	-0.732215	7.003314e-19	1.213464e-14	1.011220e-15
13	8038770	8043114	NM_031283	TCF7L1	0.729691	1.056655e-18	1.830867e-14	1.408359e-15
14	8038770	8153101	NM_152888	COL22A1	0.729572	1.077322e-18	1.866676e-14	1.333340e-15
15	8038770	8089729	NM_001015887	IGSF11	0.729512	1.087789e-18	1.884811e-14	1.256541e-15
16	8038770	7913450	NM_005529	HSPG2	0.728723	1.235735e-18	2.141158e-14	1.338224e-15
17	8038770	8110821	NM_001044	SLC6A3	0.726530	1.757472e-18	3.045172e-14	1.791278e-15
18	8038770	8170825	NM_001048181	OPN1MW2	0.726221	1.846491e-18	3.199415e-14	1.777453e-15
19	8038770	8067409	NM_005560	LAMA5	0.725919	1.937443e-18	3.357008e-14	1.766846e-15
20	8038770	7927307	NM_001630	ANXA8L2	0.724606	2.387325e-18	4.136518e-14	2.068259e-15
21	8038770	8011808	NM_001104577	GPR172B	0.724147	2.567229e-18	4.448238e-14	2.118209e-15
22	8038770	8096538	NM_001100426	RAP1GDS1	-0.722737	3.206385e-18	5.555704e-14	2.525320e-15
23	8038770	8010030	NM_003857	GALR2	0.722468	3.344848e-18	5.795618e-14	2.519834e-15
24	8038770	7973510	NM_006032	CPNE6	0.721661	3.795300e-18	6.576116e-14	2.740048e-15
25	8038770	7955896	NM_016057	COPZ1	-0.721558	3.857387e-18	6.683695e-14	2.673478e-15
26	8038770	7937443	NM_022772	EPS8L2	0.719528	5.290762e-18	9.167303e-14	3.525886e-15
27	8038770	8015349	NM_002276	KRT19	0.719460	5.347390e-18	9.265422e-14	3.431638e-15
28	8038770	8137151	NM_198455	SSPO	0.718255	6.441752e-18	1.116162e-13	3.986294e-15
29	8038770	8001211	NM_030790	ITFG1	-0.717920	6.782539e-18	1.175211e-13	4.052450e-15
30	8038770	7962083			0.716073	9.002890e-18	1.559931e-13	5.199769e-15
31	8038770	8134827	NM_173564	C7orf51	0.714213	1.194792e-17	2.070216e-13	6.678115e-15
32	8038770	8037732	NM_001029861	NANOS2	0.713487	1.333387e-17	2.310360e-13	7.219876e-15
33	8038770	8046922	NM_000090	COL3A1	0.713359	1.359383e-17	2.355403e-13	7.137586e-15
34	8038770	8018379	NM_020753	CASKIN2	0.712326	1.588300e-17	2.752047e-13	8.094255e-15
35	8038770	8052149	NM_014614	PSME4	-0.712228	1.611880e-17	2.792905e-13	7.979728e-15
36	8038770	8049509	NM_015893	PRLH	0.711406	1.823403e-17	3.159410e-13	8.776138e-15
37	8038770	7992147	NM_021098	CACNA1H	0.710674	2.034324e-17	3.524873e-13	9.526684e-15
38	8038770	8009382	NM_004459	BPTF	-0.710431	2.109478e-17	3.655092e-13	9.618664e-15
39	8038770	7931097	NM_002775	HTRA1	0.710048	2.233319e-17	3.869671e-13	9.922234e-15
40	8038770	8082788	NM_001134422	CDV3	-0.709018	2.602326e-17	4.509050e-13	1.127263e-14
41	8038770	8024754	NM_032607	CREB3L3	0.708847	2.669228e-17	4.624972e-13	1.128042e-14
42	8038770	8158666	AK128680	HMCN2	0.708803	2.686712e-17	4.655266e-13	1.108397e-14
43	8038770	8042335	NM_003375	VDAC2	-0.708744	2.710304e-17	4.696144e-13	1.092127e-14
44	8038770	7936826	NM_022466	IKZF5	-0.708140	2.963222e-17	5.134374e-13	1.166903e-14
45	8038770	8115524	NM_014666	CLINT1	-0.707765	3.132105e-17	5.426998e-13	1.206000e-14
46	8038770	7910265	NM_001098623	OBSCN	0.707607	3.205734e-17	5.554574e-13	1.207516e-14
47	8038770	8131056	NM_017781	CYP2W1	0.707473	3.269344e-17	5.664792e-13	1.205275e-14
48	8038770	8101000	ENST00000437185		0.707408	3.300862e-17	5.719404e-13	1.191543e-14
49	8038770	7916654	NM_181712	KANK4	0.707320	3.343979e-17	5.794112e-13	1.182472e-14
50	8038770	8059186	NM_002846	PTPRN	0.707017	3.496586e-17	6.058534e-13	1.211707e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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