[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
892	7995787	NM_176870	MT1M		metallothionein 1M

Fetching correlation data, please wait...
Getting list of correlations for id 892.
Getting list of p-values for id 892.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.141 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7995787	7918313	NM_001010985	MYBPHL	0.700828	8.582163e-17	1.487031e-12	1.487031e-12
2	7995787	8052024	NM_025133	FBXO11	-0.694009	2.248726e-16	3.896368e-12	1.948184e-12
3	7995787	7968650	NM_203451	C13orf36	0.687646	5.394149e-16	9.346442e-12	3.115481e-12
4	7995787	8084219	NM_017644	KLHL24	-0.682786	1.036794e-15	1.796454e-11	4.491134e-12
5	7995787	7933312	NM_001098845	ANXA8L1	0.680121	1.475734e-15	2.557005e-11	5.114009e-12
6	7995787	8133704	NM_001110199	SRRM3	0.679483	1.604868e-15	2.780754e-11	4.634590e-12
7	7995787	8038598	NM_016148	SHANK1	0.679106	1.686483e-15	2.922170e-11	4.174528e-12
8	7995787	8061324	NM_012255	XRN2	-0.675480	2.704936e-15	4.686843e-11	5.858554e-12
9	7995787	7939465	NM_016142	HSD17B12	-0.675438	2.719851e-15	4.712686e-11	5.236318e-12
10	7995787	8051622	NM_001031684	SRSF7	-0.673832	3.345624e-15	5.796962e-11	5.796962e-12
11	7995787	8089299	NM_001777	CD47	-0.673295	3.584257e-15	6.210443e-11	5.645857e-12
12	7995787	8031815	NM_173632	ZNF776	-0.671946	4.259499e-15	7.380434e-11	6.150362e-12
13	7995787	8044263	NM_006267	RANBP2	-0.669075	6.131880e-15	1.062471e-10	8.172853e-12
14	7995787	7983663	NM_005154	USP8	-0.668505	6.589108e-15	1.141695e-10	8.154962e-12
15	7995787	8137336	NM_004769	ACCN3	0.668306	6.756050e-15	1.170621e-10	7.804139e-12
16	7995787	8019699	NM_033059	KRTAP4-11	0.668285	6.773659e-15	1.173672e-10	7.335449e-12
17	7995787	8091342	NM_032153	ZIC4	0.666777	8.184478e-15	1.418124e-10	8.341909e-12
18	7995787	8083523	NM_003875	GMPS	-0.665437	9.674694e-15	1.676334e-10	9.312968e-12
19	7995787	8125234	NM_019105	TNXB	0.663975	1.159920e-14	2.009794e-10	1.057786e-11
20	7995787	7927367	NM_001040084	ANXA8	0.663922	1.167496e-14	2.022920e-10	1.011460e-11
21	7995787	7930454	NM_145341	PDCD4	-0.663322	1.257341e-14	2.178595e-10	1.037426e-11
22	7995787	7994985	NM_014712	SETD1A	0.663280	1.263873e-14	2.189914e-10	9.954152e-12
23	7995787	8105463	NM_022913	GPBP1	-0.662967	1.313651e-14	2.276162e-10	9.896358e-12
24	7995787	7927307	NM_001630	ANXA8L2	0.662565	1.380394e-14	2.391809e-10	9.965871e-12
25	7995787	8079021	NM_001904	CTNNB1	-0.661079	1.656509e-14	2.870233e-10	1.148093e-11
26	7995787	8109403	NR_024152	MFAP3	-0.660467	1.785333e-14	3.093446e-10	1.189787e-11
27	7995787	8052680	NM_004161	RAB1A	-0.659449	2.021022e-14	3.501825e-10	1.296972e-11
28	7995787	8098512	NM_021942	C4orf41	-0.659119	2.103834e-14	3.645314e-10	1.301898e-11
29	7995787	7950136	NM_005169	PHOX2A	0.656805	2.783512e-14	4.822991e-10	1.663100e-11
30	7995787	7944882	NM_022370	ROBO3	0.656498	2.888334e-14	5.004616e-10	1.668205e-11
31	7995787	8004763	NM_000180	GUCY2D	0.656176	3.002151e-14	5.201827e-10	1.678009e-11
32	7995787	7931062	NM_144587	BTBD16	0.656011	3.062370e-14	5.306169e-10	1.658178e-11
33	7995787	8067011	NM_015339	ADNP	-0.655544	3.238575e-14	5.611479e-10	1.700448e-11
34	7995787	8108453	NM_032289	PSD2	0.654870	3.511031e-14	6.083563e-10	1.789283e-11
35	7995787	8042119	NM_022894	PAPOLG	-0.654113	3.842931e-14	6.658647e-10	1.902471e-11
36	7995787	8036072	NM_207392	KRTDAP	0.652633	4.582439e-14	7.939993e-10	2.205554e-11
37	7995787	7949080	NM_015080	NRXN2	0.652303	4.765053e-14	8.256408e-10	2.231461e-11
38	7995787	7903541	NM_007269	STXBP3	-0.652204	4.820993e-14	8.353335e-10	2.198246e-11
39	7995787	8137715	NM_182924	MICALL2	0.652176	4.837344e-14	8.381666e-10	2.149145e-11
40	7995787	8023212	NM_001039360	ZBTB7C	0.652090	4.886701e-14	8.467187e-10	2.116797e-11
41	7995787	8113469	NM_014819	PJA2	-0.651975	4.953812e-14	8.583470e-10	2.093529e-11
42	7995787	8050190	NM_003183	ADAM17	-0.651347	5.335220e-14	9.244336e-10	2.201032e-11
43	7995787	7973336	NM_004995	MMP14	0.650434	5.940734e-14	1.029351e-9	2.393839e-11
44	7995787	8105191	NM_024615	PARP8	-0.650079	6.194005e-14	1.073235e-9	2.439171e-11
45	7995787	7949592	NM_004292	RIN1	0.649661	6.505258e-14	1.127166e-9	2.504814e-11
46	7995787	8075365	NM_001017981	RNF215	0.649346	6.749957e-14	1.169565e-9	2.542533e-11
47	7995787	7977058	NM_001969	EIF5	-0.648958	7.063655e-14	1.223919e-9	2.604084e-11
48	7995787	8158009	NM_014580	SLC2A8	0.648868	7.138644e-14	1.236913e-9	2.576902e-11
49	7995787	7914433	NM_001703	BAI2	0.648189	7.727430e-14	1.338932e-9	2.732514e-11
50	7995787	7936826	NM_022466	IKZF5	-0.647887	8.004453e-14	1.386932e-9	2.773863e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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	with keyword:
	KEGG Pathway:
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Remove	"self correlations", i.e. correlations of a variable with itself
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