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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
2842 8092978 NM_018406 MUC4 link to infopage mucin 4, cell surface associated

Fetching correlation data, please wait...
Getting list of correlations for id 2842.
Getting list of p-values for id 2842.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.123 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8092978 7913450 NM_005529 HSPG2 link to infopage 0.800810 1.141576e-24 1.978009e-20 1.978009e-20
2 8092978 7937560 NM_002457 MUC2 link to infopage 0.786247 2.896171e-23 5.018196e-19 2.509098e-19
3 8092978 7946860 NM_000352 ABCC8 link to infopage 0.778193 1.557415e-22 2.698533e-18 8.995110e-19
4 8092978 8131056 NM_017781 CYP2W1 link to infopage 0.774824 3.082735e-22 5.341455e-18 1.335364e-18
5 8092978 7906307 NM_018240 KIRREL link to infopage 0.770735 6.951711e-22 1.204523e-17 2.409046e-18
6 8092978 7955184 NM_006262 PRPH link to infopage 0.770094 7.883950e-22 1.366052e-17 2.276753e-18
7 8092978 8035648 NM_001001524 TM6SF2 link to infopage 0.766445 1.602450e-21 2.776565e-17 3.966521e-18
8 8092978 7927307 NM_001630 ANXA8L2 link to infopage 0.765261 2.011941e-21 3.486090e-17 4.357612e-18
9 8092978 8028407 NM_000540 RYR1 link to infopage 0.764244 2.443133e-21 4.233217e-17 4.703574e-18
10 8092978 8060134 NM_004321 KIF1A link to infopage 0.762163 3.624567e-21 6.280287e-17 6.280287e-18
11 8092978 7953150 NM_003213 TEAD4 link to infopage 0.761010 4.502011e-21 7.800635e-17 7.091486e-18
12 8092978 7987701 NM_016642 SPTBN5 link to infopage 0.760956 4.548156e-21 7.880590e-17 6.567158e-18
13 8092978 8068496 NM_009586 SIM2 link to infopage 0.760397 5.049686e-21 8.749590e-17 6.730454e-18
14 8092978 8018379 NM_020753 CASKIN2 link to infopage 0.759268 6.232818e-21 1.079960e-16 7.714003e-18
15 8092978 7997801 NM_013278 IL17C link to infopage 0.757807 8.170692e-21 1.415736e-16 9.438239e-18
16 8092978 7952227 NM_015645 C1QTNF5 link to infopage 0.755363 1.279480e-20 2.216954e-16 1.385596e-17
17 8092978 7916654 NM_181712 KANK4 link to infopage 0.754314 1.548675e-20 2.683390e-16 1.578465e-17
18 8092978 7914260 NM_002379 MATN1 link to infopage 0.754126 1.602292e-20 2.776291e-16 1.542384e-17
19 8092978 7927367 NM_001040084 ANXA8 link to infopage 0.751554 2.547837e-20 4.414638e-16 2.323493e-17
20 8092978 8055476 NR_024058 YWHAE link to infopage -0.749968 3.381279e-20 5.858742e-16 2.929371e-17
21 8092978 7998414 ENST00000428636 link to infopage 0.749617 3.598877e-20 6.235775e-16 2.969417e-17
22 8092978 8033487 NM_032447 FBN3 link to infopage 0.749474 3.691592e-20 6.396422e-16 2.907464e-17
23 8092978 7951859 NM_000482 APOA4 link to infopage 0.749267 3.829679e-20 6.635685e-16 2.885080e-17
24 8092978 8034469 NM_032301 FBXW9 link to infopage 0.749076 3.961348e-20 6.863827e-16 2.859928e-17
25 8092978 8038280 NM_000737 CGB link to infopage 0.748723 4.216444e-20 7.305832e-16 2.922333e-17
26 8092978 8153101 NM_152888 COL22A1 link to infopage 0.748246 4.587140e-20 7.948137e-16 3.056976e-17
27 8092978 8044927 NM_002193 INHBB link to infopage 0.746842 5.871106e-20 1.017286e-15 3.767728e-17
28 8092978 7970241 NM_000504 F10 link to infopage 0.746223 6.542873e-20 1.133684e-15 4.048870e-17
29 8092978 8110821 NM_001044 SLC6A3 link to infopage 0.744592 8.692211e-20 1.506099e-15 5.193446e-17
30 8092978 8170716 NM_005393 PLXNB3 link to infopage 0.744458 8.895251e-20 1.541280e-15 5.137600e-17
31 8092978 7977216 NM_015656 KIF26A link to infopage 0.743506 1.048863e-19 1.817365e-15 5.862469e-17
32 8092978 8032197 NM_152769 C19orf26 link to infopage 0.741900 1.382138e-19 2.394831e-15 7.483847e-17
33 8092978 8156783 NM_001855 COL15A1 link to infopage 0.741679 1.435462e-19 2.487226e-15 7.537048e-17
34 8092978 8015189 NM_030966 KRTAP1-3 link to infopage 0.741300 1.531523e-19 2.653670e-15 7.804913e-17
35 8092978 8019585 NM_030966 KRTAP1-3 link to infopage 0.741300 1.531523e-19 2.653670e-15 7.581916e-17
36 8092978 8032699 NM_015174 ZFR2 link to infopage 0.741252 1.544135e-19 2.675523e-15 7.432008e-17
37 8092978 8179716 NM_001264 CDSN link to infopage 0.739385 2.121244e-19 3.675480e-15 9.933729e-17
38 8092978 8076007 NM_025045 BAIAP2L2 link to infopage 0.738513 2.457989e-19 4.258958e-15 1.120778e-16
39 8092978 8049509 NM_015893 PRLH link to infopage 0.738427 2.493874e-19 4.321136e-15 1.107984e-16
40 8092978 7989887 NM_032445 MEGF11 link to infopage 0.736436 3.483012e-19 6.035015e-15 1.508754e-16
41 8092978 8157804 NM_182487 OLFML2A link to infopage 0.736146 3.655708e-19 6.334245e-15 1.544938e-16
42 8092978 8138474 NM_198956 SP8 link to infopage 0.735700 3.937928e-19 6.823247e-15 1.624583e-16
43 8092978 8132270 NM_207172 NPSR1 link to infopage 0.735679 3.951720e-19 6.847145e-15 1.592359e-16
44 8092978 7907549 NM_022093 TNN link to infopage 0.735528 4.052110e-19 7.021091e-15 1.595702e-16
45 8092978 7991893 BC016613 C16orf11 link to infopage 0.735372 4.159132e-19 7.206528e-15 1.601451e-16
46 8092978 7935983 NM_005029 PITX3 link to infopage 0.735368 4.161731e-19 7.211031e-15 1.567615e-16
47 8092978 8114550 NM_004883 NRG2 link to infopage 0.735200 4.279346e-19 7.414822e-15 1.577622e-16
48 8092978 8067551 ENST00000415185 link to infopage 0.734923 4.481120e-19 7.764437e-15 1.617591e-16
49 8092978 7896865 NM_153254 TTLL10 link to infopage 0.734876 4.515930e-19 7.824752e-15 1.596888e-16
50 8092978 8004802 NM_017622 C17orf59 link to infopage 0.734751 4.610582e-19 7.988755e-15 1.597751e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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