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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 6180.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
6180 8178795 NM_019602 BTNL2 link to infopage butyrophilin-like 2 (MHC class II associated)

Fetching correlation data, please wait...
Getting list of correlations for id 6180.
Getting list of p-values for id 6180.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.113 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8178795 8125426 NM_019602 BTNL2 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8178795 8179996 NM_019602 BTNL2 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 8178795 7913450 NM_005529 HSPG2 link to infopage 0.791847 8.612720e-24 1.492326e-19 4.974420e-20
4 8178795 8004842 NM_173728 ARHGEF15 link to infopage 0.773094 4.357341e-22 7.549965e-18 1.887491e-18
5 8178795 8032312 NM_138813 ATP8B3 link to infopage 0.771698 5.748608e-22 9.960614e-18 1.992123e-18
6 8178795 8131056 NM_017781 CYP2W1 link to infopage 0.767833 1.225423e-21 2.123291e-17 3.538818e-18
7 8178795 7985620 NM_020778 ALPK3 link to infopage 0.767115 1.408330e-21 2.440213e-17 3.486018e-18
8 8178795 7927367 NM_001040084 ANXA8 link to infopage 0.760261 5.179872e-21 8.975164e-17 1.121896e-17
9 8178795 8153346 NM_023946 LYNX1 link to infopage 0.759729 5.719896e-21 9.910864e-17 1.101207e-17
10 8178795 7920744 NM_000298 PKLR link to infopage 0.757472 8.691286e-21 1.505939e-16 1.505939e-17
11 8178795 7899265 NM_006142 SFN link to infopage 0.752735 2.060463e-20 3.570164e-16 3.245603e-17
12 8178795 8083887 NM_005602 CLDN11 link to infopage 0.751744 2.462167e-20 4.266197e-16 3.555164e-17
13 8178795 8163548 NM_138424 KIF12 link to infopage 0.749060 3.972557e-20 6.883250e-16 5.294808e-17
14 8178795 8038280 NM_000737 CGB link to infopage 0.748909 4.080357e-20 7.070035e-16 5.050025e-17
15 8178795 8121209 NM_005604 POU3F2 link to infopage 0.748637 4.281147e-20 7.417943e-16 4.945295e-17
16 8178795 8157804 NM_182487 OLFML2A link to infopage 0.748574 4.329353e-20 7.501469e-16 4.688418e-17
17 8178795 8151609 NM_172239 REXO1L1 link to infopage 0.748372 4.486177e-20 7.773198e-16 4.572470e-17
18 8178795 8110382 NM_030567 PRR7 link to infopage 0.747610 5.130529e-20 8.889668e-16 4.938704e-17
19 8178795 7992845 NM_003456 ZNF205 link to infopage 0.746993 5.718451e-20 9.908360e-16 5.214926e-17
20 8178795 8064111 NM_032957 RTEL1 link to infopage 0.746138 6.641015e-20 1.150689e-15 5.753444e-17
21 8178795 7927307 NM_001630 ANXA8L2 link to infopage 0.744137 9.404504e-20 1.629518e-15 7.759611e-17
22 8178795 7987511 NM_207380 C15orf52 link to infopage 0.743771 1.001819e-19 1.735851e-15 7.890234e-17
23 8178795 8114550 NM_004883 NRG2 link to infopage 0.743643 1.024271e-19 1.774755e-15 7.716325e-17
24 8178795 7903632 NM_001408 CELSR2 link to infopage 0.743558 1.039318e-19 1.800826e-15 7.503441e-17
25 8178795 8053872 NM_001002036 ASTL link to infopage 0.741425 1.499206e-19 2.597674e-15 1.039069e-16
26 8178795 7906307 NM_018240 KIRREL link to infopage 0.741026 1.604844e-19 2.780713e-15 1.069505e-16
27 8178795 8042537 NM_001692 ATP6V1B1 link to infopage 0.740260 1.828451e-19 3.168157e-15 1.173392e-16
28 8178795 7898616 NM_022819 PLA2G2F link to infopage 0.739768 1.987754e-19 3.444182e-15 1.230065e-16
29 8178795 8036072 NM_207392 KRTDAP link to infopage 0.739545 2.064584e-19 3.577305e-15 1.233553e-16
30 8178795 8029458 NM_001039213 CEACAM16 link to infopage 0.737758 2.791005e-19 4.835974e-15 1.611991e-16
31 8178795 8117849 NM_033229 TRIM15 link to infopage 0.737452 2.938491e-19 5.091523e-15 1.642427e-16
32 8178795 8177760 NM_033229 TRIM15 link to infopage 0.737452 2.938491e-19 5.091523e-15 1.591101e-16
33 8178795 8179070 NM_033229 TRIM15 link to infopage 0.737452 2.938491e-19 5.091523e-15 1.542886e-16
34 8178795 7934367 NM_004034 ANXA7 link to infopage -0.736251 3.592220e-19 6.224240e-15 1.830659e-16
35 8178795 7970241 NM_000504 F10 link to infopage 0.735996 3.748729e-19 6.495424e-15 1.855835e-16
36 8178795 8125383 NM_004557 NOTCH4 link to infopage 0.734917 4.485048e-19 7.771242e-15 2.158678e-16
37 8178795 8153828 NM_003923 FOXH1 link to infopage 0.734455 4.842023e-19 8.389773e-15 2.267506e-16
38 8178795 8086051 NM_015551 SUSD5 link to infopage 0.733369 5.793227e-19 1.003792e-14 2.641559e-16
39 8178795 8077204 NM_000040 APOC3 link to infopage 0.732881 6.278432e-19 1.087864e-14 2.789394e-16
40 8178795 7987701 NM_016642 SPTBN5 link to infopage 0.732878 6.281055e-19 1.088318e-14 2.720796e-16
41 8178795 8046604 NM_003659 AGPS link to infopage -0.732542 6.638025e-19 1.150171e-14 2.805294e-16
42 8178795 8005879 NR_027384 SLC13A2 link to infopage 0.732305 6.901103e-19 1.195754e-14 2.847033e-16
43 8178795 8039362 NM_178837 C19orf51 link to infopage 0.732196 7.025202e-19 1.217257e-14 2.830830e-16
44 8178795 8036270 NM_152658 THAP8 link to infopage 0.731747 7.561306e-19 1.310147e-14 2.977608e-16
45 8178795 8095048 NM_030917 FIP1L1 link to infopage -0.731533 7.830194e-19 1.356738e-14 3.014973e-16
46 8178795 8166219 NM_032796 SYAP1 link to infopage -0.730987 8.560773e-19 1.483325e-14 3.224620e-16
47 8178795 7944035 NM_000040 APOC3 link to infopage 0.730285 9.596075e-19 1.662712e-14 3.537685e-16
48 8178795 8038299 NM_033142 CGB7 link to infopage 0.729974 1.009312e-18 1.748835e-14 3.643406e-16
49 8178795 8056943 NM_030650 KIAA1715 link to infopage -0.729928 1.016915e-18 1.762009e-14 3.595937e-16
50 8178795 7955305 NM_001652 AQP6 link to infopage 0.729794 1.039236e-18 1.800685e-14 3.601369e-16

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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