[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
6019	7905544	NM_005987	SPRR1A		small proline-rich protein 1A

Fetching correlation data, please wait...
Getting list of correlations for id 6019.
Getting list of p-values for id 6019.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.135 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	7905544	8065566	NM_001037500	DEFB124	0.720462	4.576593e-18	7.929862e-14	7.929862e-14
2	7905544	8010768			0.711305	1.851105e-17	3.207410e-13	1.603705e-13
3	7905544	8035801	ENST00000364165		0.711189	1.883648e-17	3.263797e-13	1.087932e-13
4	7905544	8167407	NM_181532	ERAS	0.700338	9.206187e-17	1.595156e-12	3.987890e-13
5	7905544	8003939	NM_003963	TM4SF5	0.699631	1.018314e-16	1.764432e-12	3.528864e-13
6	7905544	8119435	NM_004828	NCR2	0.692939	2.609245e-16	4.521038e-12	7.535063e-13
7	7905544	8029779	NM_198541	IGFL1	0.689560	4.155697e-16	7.200576e-12	1.028654e-12
8	7905544	8142878	NM_139286	CDC26	-0.686083	6.664833e-16	1.154816e-11	1.443520e-12
9	7905544	7923528	NM_002479	MYOG	0.685271	7.435517e-16	1.288352e-11	1.431502e-12
10	7905544	8108470	ENST00000384587		0.682292	1.107236e-15	1.918508e-11	1.918508e-12
11	7905544	8151621	AF495523	REXO1L1	0.679383	1.626092e-15	2.817530e-11	2.561391e-12
12	7905544	8151617	AF495523	REXO1L1	0.679383	1.626092e-15	2.817530e-11	2.347941e-12
13	7905544	8151625	AF495523	REXO1L1	0.679383	1.626092e-15	2.817530e-11	2.167331e-12
14	7905544	8151613	AF495523	REXO1L1	0.679383	1.626092e-15	2.817530e-11	2.012521e-12
15	7905544	8151605	AF495523	REXO1L1	0.679383	1.626092e-15	2.817530e-11	1.878353e-12
16	7905544	7959597	NM_006815	TMED2	-0.678166	1.907293e-15	3.304766e-11	2.065479e-12
17	7905544	7946676	ENST00000390835		0.678000	1.949118e-15	3.377236e-11	1.986609e-12
18	7905544	7963020	NM_021044	DHH	0.676434	2.390413e-15	4.141869e-11	2.301038e-12
19	7905544	8063476	NM_019888	MC3R	0.675780	2.601900e-15	4.508313e-11	2.372796e-12
20	7905544	8027381	ENST00000459344		0.674462	3.084963e-15	5.345316e-11	2.672658e-12
21	7905544	8115849			0.673440	3.518530e-15	6.096557e-11	2.903123e-12
22	7905544	8007127	NM_031962	KRTAP9-3	0.673195	3.630763e-15	6.291024e-11	2.859556e-12
23	7905544	8070786	NM_198688	KRTAP10-6	0.672299	4.071887e-15	7.055358e-11	3.067547e-12
24	7905544	8165021	ENST00000428385		0.671117	4.734414e-15	8.203319e-11	3.418049e-12
25	7905544	8062174	NM_198398	ERGIC3	-0.669838	5.568024e-15	9.647715e-11	3.859086e-12
26	7905544	7975645	NM_021188	ZNF410	-0.668647	6.472465e-15	1.121484e-10	4.313400e-12
27	7905544	8070563	NR_027243	C21orf128	0.666696	8.268277e-15	1.432644e-10	5.306090e-12
28	7905544	8125042	NM_025261	LY6G6C	0.664615	1.071396e-14	1.856408e-10	6.630028e-12
29	7905544	7974229	NM_014315	KLHDC2	-0.663981	1.159077e-14	2.008333e-10	6.925288e-12
30	7905544	7984892	NM_021819	LMAN1L	0.663894	1.171537e-14	2.029923e-10	6.766409e-12
31	7905544	8049729	NM_198998	AQP12A	0.662664	1.363693e-14	2.362871e-10	7.622164e-12
32	7905544	8084634	NM_016306	DNAJB11	-0.662473	1.396159e-14	2.419125e-10	7.559765e-12
33	7905544	8174338	NM_024657	MORC4	0.661484	1.576327e-14	2.731301e-10	8.276671e-12
34	7905544	7901696	NM_174936	PCSK9	0.661457	1.581606e-14	2.740448e-10	8.060143e-12
35	7905544	8048108			0.661420	1.588767e-14	2.752856e-10	7.865304e-12
36	7905544	7977965	NM_016609	SLC22A17	0.661331	1.606141e-14	2.782960e-10	7.730446e-12
37	7905544	7992775	NM_152341	PAQR4	0.660627	1.750620e-14	3.033299e-10	8.198104e-12
38	7905544	7968199	NM_001260	CDK8	-0.659396	2.034283e-14	3.524802e-10	9.275794e-12
39	7905544	8060126	NM_198998	AQP12A	0.657846	2.454664e-14	4.253197e-10	1.090563e-11
40	7905544	8093156	NM_007362	NCBP2	-0.657800	2.468572e-14	4.277295e-10	1.069324e-11
41	7905544	7933237	NM_174890	ANUBL1	-0.656400	2.922538e-14	5.063882e-10	1.235093e-11
42	7905544	7947649	NM_000741	CHRM4	0.656376	2.930695e-14	5.078015e-10	1.209051e-11
43	7905544	7941709	NM_002896	RBM4	-0.655785	3.146538e-14	5.452006e-10	1.267908e-11
44	7905544	7998414	ENST00000428636		0.655506	3.253472e-14	5.637291e-10	1.281203e-11
45	7905544	8125805	NM_000841	GRM4	0.654954	3.475803e-14	6.022524e-10	1.338339e-11
46	7905544	8060765	NM_012409	PRND	0.654338	3.741339e-14	6.482617e-10	1.409265e-11
47	7905544	8018600	NM_014230	SRP68	-0.653723	4.025836e-14	6.975565e-10	1.484163e-11
48	7905544	8083119	NM_014245	RNF7	-0.653506	4.130955e-14	7.157707e-10	1.491189e-11
49	7905544	8065550	ENST00000363455		0.653273	4.246861e-14	7.358536e-10	1.501742e-11
50	7905544	8154848	NM_007343	PRSS3	0.651374	5.317880e-14	9.214290e-10	1.842858e-11

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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