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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
667 8001464 NM_001143685 CES7 link to infopage carboxylesterase 7

Fetching correlation data, please wait...
Getting list of correlations for id 667.
Getting list of p-values for id 667.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.149 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8001464 7955305 NM_001652 AQP6 link to infopage 0.725995 1.914167e-18 3.316677e-14 3.316677e-14
2 8001464 8151629 link to infopage 0.717263 7.503500e-18 1.300131e-13 6.500657e-14
3 8001464 7927179 NM_001123376 TMEM72 link to infopage 0.713418 1.347457e-17 2.334738e-13 7.782460e-14
4 8001464 8163548 NM_138424 KIF12 link to infopage 0.711720 1.739568e-17 3.014149e-13 7.535373e-14
5 8001464 8032051 NM_182577 ODF3L2 link to infopage 0.709610 2.383527e-17 4.129937e-13 8.259874e-14
6 8001464 8110821 NM_001044 SLC6A3 link to infopage 0.705356 4.459298e-17 7.726626e-13 1.287771e-13
7 8001464 8042537 NM_001692 ATP6V1B1 link to infopage 0.705313 4.487493e-17 7.775479e-13 1.110783e-13
8 8001464 8151605 AF495523 REXO1L1 link to infopage 0.704635 4.953616e-17 8.583130e-13 1.072891e-13
9 8001464 8151613 AF495523 REXO1L1 link to infopage 0.704635 4.953616e-17 8.583130e-13 9.536811e-14
10 8001464 8151617 AF495523 REXO1L1 link to infopage 0.704635 4.953616e-17 8.583130e-13 8.583130e-14
11 8001464 8151621 AF495523 REXO1L1 link to infopage 0.704635 4.953616e-17 8.583130e-13 7.802845e-14
12 8001464 8151625 AF495523 REXO1L1 link to infopage 0.704635 4.953616e-17 8.583130e-13 7.152608e-14
13 8001464 7914667 NM_052896 CSMD2 link to infopage 0.696769 1.527632e-16 2.646928e-12 2.036099e-13
14 8001464 8043114 NM_031283 TCF7L1 link to infopage 0.695936 1.717398e-16 2.975735e-12 2.125525e-13
15 8001464 7992845 NM_003456 ZNF205 link to infopage 0.694915 1.981554e-16 3.433439e-12 2.288959e-13
16 8001464 7987701 NM_016642 SPTBN5 link to infopage 0.694417 2.124202e-16 3.680605e-12 2.300378e-13
17 8001464 8038280 NM_000737 CGB link to infopage 0.693267 2.492954e-16 4.319542e-12 2.540907e-13
18 8001464 8033674 NM_024690 MUC16 link to infopage 0.691391 3.231621e-16 5.599430e-12 3.110794e-13
19 8001464 7952290 NM_012101 TRIM29 link to infopage 0.690721 3.543829e-16 6.140392e-12 3.231785e-13
20 8001464 8012126 NM_001307 CLDN7 link to infopage 0.689591 4.137935e-16 7.169799e-12 3.584900e-13
21 8001464 7928126 NM_014431 KIAA1274 link to infopage 0.689492 4.194350e-16 7.267550e-12 3.460738e-13
22 8001464 8055476 NR_024058 YWHAE link to infopage -0.686687 6.142922e-16 1.064384e-11 4.838109e-13
23 8001464 7897974 NM_001080830 PRAMEF12 link to infopage 0.685089 7.619110e-16 1.320163e-11 5.739840e-13
24 8001464 7937560 NM_002457 MUC2 link to infopage 0.682654 1.055145e-15 1.828250e-11 7.617706e-13
25 8001464 7944147 NM_001680 FXYD2 link to infopage 0.682535 1.072020e-15 1.857490e-11 7.429959e-13
26 8001464 7995344 link to infopage 0.682110 1.134366e-15 1.965516e-11 7.559678e-13
27 8001464 8043157 NM_198482 SH2D6 link to infopage 0.681629 1.209059e-15 2.094936e-11 7.759024e-13
28 8001464 8049737 NM_000030 AGXT link to infopage 0.681625 1.209652e-15 2.095964e-11 7.485586e-13
29 8001464 7946860 NM_000352 ABCC8 link to infopage 0.680663 1.373857e-15 2.380483e-11 8.208561e-13
30 8001464 8038292 NM_033043 CGB5 link to infopage 0.677616 2.049508e-15 3.551182e-11 1.183727e-12
31 8001464 7898616 NM_022819 PLA2G2F link to infopage 0.677299 2.136037e-15 3.701111e-11 1.193907e-12
32 8001464 7947744 NM_002334 LRP4 link to infopage 0.677285 2.139918e-15 3.707836e-11 1.158699e-12
33 8001464 7936762 NM_001001976 ATE1 link to infopage -0.677245 2.151147e-15 3.727292e-11 1.129483e-12
34 8001464 7970262 NM_001008895 CUL4A link to infopage -0.676509 2.367242e-15 4.101719e-11 1.206388e-12
35 8001464 7998414 ENST00000428636 link to infopage 0.675340 2.754560e-15 4.772825e-11 1.363664e-12
36 8001464 8027920 NM_014209 ETV2 link to infopage 0.675277 2.776750e-15 4.811274e-11 1.336465e-12
37 8001464 8137336 NM_004769 ACCN3 link to infopage 0.674306 3.147549e-15 5.453758e-11 1.473989e-12
38 8001464 8009602 NM_153209 KIF19 link to infopage 0.674166 3.204696e-15 5.552776e-11 1.461257e-12
39 8001464 8139411 NM_182547 TMED4 link to infopage -0.673521 3.481867e-15 6.033031e-11 1.546931e-12
40 8001464 8038299 NM_033142 CGB7 link to infopage 0.673141 3.655889e-15 6.334559e-11 1.583640e-12
41 8001464 7934367 NM_004034 ANXA7 link to infopage -0.672917 3.762208e-15 6.518778e-11 1.589946e-12
42 8001464 7925813 NR_027152 C10orf108 link to infopage 0.672713 3.862035e-15 6.691748e-11 1.593273e-12
43 8001464 7913450 NM_005529 HSPG2 link to infopage 0.671634 4.432611e-15 7.680385e-11 1.786136e-12
44 8001464 7936108 NM_001001412 CALHM1 link to infopage 0.671282 4.635686e-15 8.032254e-11 1.825512e-12
45 8001464 7912316 NM_001079843 CASZ1 link to infopage 0.670457 5.148043e-15 8.920015e-11 1.982225e-12
46 8001464 8158666 AK128680 HMCN2 link to infopage 0.670417 5.174606e-15 8.966040e-11 1.949139e-12
47 8001464 7985459 ENST00000342039 link to infopage 0.669316 5.948661e-15 1.030724e-10 2.193031e-12
48 8001464 7990928 ENST00000342039 link to infopage 0.669316 5.948661e-15 1.030724e-10 2.147343e-12
49 8001464 7985418 ENST00000342039 link to infopage 0.669316 5.948661e-15 1.030724e-10 2.103519e-12
50 8001464 8024373 NM_001039846 IZUMO4 link to infopage 0.669089 6.121538e-15 1.060679e-10 2.121358e-12

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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