[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 12682.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
12682 8117834 NM_021959 PPP1R11 link to infopage protein phosphatase 1, regulatory (inhibitor) subunit 11

Fetching correlation data, please wait...
Getting list of correlations for id 12682.
Getting list of p-values for id 12682.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.083 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8117834 8177744 NM_021959 PPP1R11 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8117834 8167334 NM_000377 WAS link to infopage 0.718758 5.960938e-18 1.032852e-13 5.164259e-14
3 8117834 7898161 NM_024329 EFHD2 link to infopage 0.712410 1.568469e-17 2.717687e-13 9.058956e-14
4 8117834 8124798 NM_133471 KIAA1949 link to infopage 0.708454 2.828862e-17 4.901569e-13 1.225392e-13
5 8117834 8015545 NM_201434 RAB5C link to infopage 0.694420 2.123298e-16 3.679038e-12 7.358075e-13
6 8117834 8013486 NM_015276 USP22 link to infopage 0.685806 6.918664e-16 1.198797e-11 1.997995e-12
7 8117834 7966929 NM_006861 RAB35 link to infopage 0.684600 8.136021e-16 1.409728e-11 2.013898e-12
8 8117834 8037794 NM_016457 PRKD2 link to infopage 0.682854 1.027465e-15 1.780288e-11 2.225361e-12
9 8117834 7949264 NM_006795 EHD1 link to infopage 0.680477 1.408112e-15 2.439837e-11 2.710929e-12
10 8117834 8079950 NM_002070 GNAI2 link to infopage 0.678985 1.713374e-15 2.968763e-11 2.968763e-12
11 8117834 8010983 NM_021962 ABR link to infopage 0.676012 2.524841e-15 4.374793e-11 3.977084e-12
12 8117834 8141526 NM_030935 TSC22D4 link to infopage 0.671814 4.331930e-15 7.505935e-11 6.254946e-12
13 8117834 7953569 NM_080549 PTPN6 link to infopage 0.666918 8.041652e-15 1.393377e-10 1.071828e-11
14 8117834 8175039 NM_001421 ELF4 link to infopage 0.660648 1.746177e-14 3.025601e-10 2.161144e-11
15 8117834 8032392 NM_199054 MKNK2 link to infopage 0.654965 3.471269e-14 6.014669e-10 4.009779e-11
16 8117834 8019765 NM_004309 ARHGDIA link to infopage 0.651592 5.182774e-14 8.980192e-10 5.612620e-11
17 8117834 8019263 NM_004309 ARHGDIA link to infopage 0.649166 6.893679e-14 1.194468e-9 7.026281e-11
18 8117834 8170891 NM_001493 GDI1 link to infopage 0.647930 7.964276e-14 1.379970e-9 7.666501e-11
19 8117834 8125360 NM_002586 PBX2 link to infopage 0.646797 9.085057e-14 1.574168e-9 8.285094e-11
20 8117834 7984871 NM_004383 CSK link to infopage 0.646129 9.816670e-14 1.700934e-9 8.504672e-11
21 8117834 7967331 NM_024667 VPS37B link to infopage 0.645472 1.059167e-13 1.835218e-9 8.739135e-11
22 8117834 7906235 NM_005973 PRCC link to infopage 0.644585 1.173123e-13 2.032669e-9 9.239406e-11
23 8117834 8178790 NM_022107 GPSM3 link to infopage 0.644141 1.234604e-13 2.139199e-9 9.300866e-11
24 8117834 8125373 NM_022107 GPSM3 link to infopage 0.643147 1.383577e-13 2.397324e-9 9.988851e-11
25 8117834 8179987 NM_022107 GPSM3 link to infopage 0.643147 1.383577e-13 2.397324e-9 9.589297e-11
26 8117834 8075343 NM_005877 SF3A1 link to infopage 0.639774 2.030814e-13 3.518791e-9 1.353381e-10
27 8117834 8048304 NM_021198 CTDSP1 link to infopage 0.638555 2.330095e-13 4.037355e-9 1.495317e-10
28 8117834 7930139 NM_030912 TRIM8 link to infopage 0.637987 2.483672e-13 4.303459e-9 1.536950e-10
29 8117834 8085412 NM_001134382 IQSEC1 link to infopage 0.637605 2.592502e-13 4.492028e-9 1.548975e-10
30 8117834 8016628 NM_032595 PPP1R9B link to infopage 0.636872 2.814302e-13 4.876342e-9 1.625447e-10
31 8117834 8034762 NM_002730 PRKACA link to infopage 0.635547 3.262782e-13 5.653422e-9 1.823685e-10
32 8117834 8018324 NM_138619 GGA3 link to infopage 0.635171 3.402359e-13 5.895267e-9 1.842271e-10
33 8117834 7949465 NM_021975 RELA link to infopage 0.634195 3.791480e-13 6.569497e-9 1.990757e-10
34 8117834 8080487 NM_006254 PRKCD link to infopage 0.631831 4.920937e-13 8.526508e-9 2.507797e-10
35 8117834 8003903 NM_004313 ARRB2 link to infopage 0.630389 5.763084e-13 9.985695e-9 2.853056e-10
36 8117834 8036720 NM_019088 PAF1 link to infopage 0.629772 6.164428e-13 1.068111e-8 2.966974e-10
37 8117834 7905028 CR541728 LSP1 link to infopage 0.629369 6.441045e-13 1.116040e-8 3.016324e-10
38 8117834 8012376 NM_014232 VAMP2 link to infopage 0.628820 6.837494e-13 1.184733e-8 3.117718e-10
39 8117834 8024358 NM_001319 CSNK1G2 link to infopage 0.627221 8.130923e-13 1.408845e-8 3.612423e-10
40 8117834 8003171 NM_021149 COTL1 link to infopage 0.624488 1.090710e-12 1.889873e-8 4.724683e-10
41 8117834 8037331 NM_006297 XRCC1 link to infopage 0.623467 1.216312e-12 2.107504e-8 5.140254e-10
42 8117834 7964203 NM_013449 BAZ2A link to infopage 0.623193 1.252455e-12 2.170128e-8 5.166971e-10
43 8117834 7941537 NM_018026 PACS1 link to infopage 0.622466 1.353086e-12 2.344492e-8 5.452306e-10
44 8117834 7985605 NM_014630 ZNF592 link to infopage 0.620832 1.608705e-12 2.787403e-8 6.335007e-10
45 8117834 7973352 NM_014045 LRP10 link to infopage 0.619630 1.825921e-12 3.163774e-8 7.030609e-10
46 8117834 8080013 NM_004635 MAPKAPK3 link to infopage 0.619554 1.840586e-12 3.189184e-8 6.933008e-10
47 8117834 8013191 NM_002018 FLII link to infopage 0.618272 2.105382e-12 3.647996e-8 7.761693e-10
48 8117834 8064336 NM_144628 TBC1D20 link to infopage 0.618014 2.162817e-12 3.747512e-8 7.807318e-10
49 8117834 8083221 NM_002586 PBX2 link to infopage 0.614869 2.999246e-12 5.196793e-8 1.060570e-9
50 8117834 8134890 NM_005273 GNB2 link to infopage 0.613905 3.312969e-12 5.740381e-8 1.148076e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!