[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id	Label1	AccNum	GeneSym	Info	Gene Name
1680	8013331	NM_015681	B9D1		B9 protein domain 1

Fetching correlation data, please wait...
Getting list of correlations for id 1680.
Getting list of p-values for id 1680.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.126 seconds. Transmitting 50 results:

Column legend:

Rank: Row number sorted by strongest correlation
Label1: Affymetrix probe set identifier(s) of the gene used in the search
Label2: Affymetrix probe set identifiers of genes correlating to the Label 1 gene
AccNum: The unique identifier for a sequence record [accessible at NCBI]
GeneSym: Official gene symbol
Info: Link to more information about the variable in the given row
Pearson r: Pearson correlation coefficient
Raw p: Unadjusted p-value
Bonferroni: Bonferroni corrected p-value
FDR (BH): False Discovery rate calculated by the Benjamini-Hochberg Procedure

Rank	Label1	Label2	AccNum	GeneSym	Pearson r	Raw p	Bonferroni	FDR (BH)
1	8013331	8156415	NM_006648	WNK2	0.763421	2.856895e-21	4.950142e-17	4.950142e-17
2	8013331	7905025	NM_000798	DRD5	0.759707	5.743470e-21	9.951710e-17	4.975855e-17
3	8013331	8004763	NM_000180	GUCY2D	0.759433	6.043938e-21	1.047233e-16	3.490777e-17
4	8013331	8053725	NM_000798	DRD5	0.759101	6.429447e-21	1.114030e-16	2.785076e-17
5	8013331	7998015	NM_032451	SPIRE2	0.753660	1.743580e-20	3.021101e-16	6.042203e-17
6	8013331	8165934	NM_001649	SHROOM2	0.751742	2.463313e-20	4.268182e-16	7.113636e-17
7	8013331	7955317	NM_020039	ACCN2	0.748142	4.671967e-20	8.095117e-16	1.156445e-16
8	8013331	8030015	NM_012451	SYNGR4	0.741015	1.607918e-19	2.786040e-15	3.482550e-16
9	8013331	8099918	AK291454	UBE2K	0.739293	2.154406e-19	3.732939e-15	4.147709e-16
10	8013331	8060134	NM_004321	KIF1A	0.739252	2.169630e-19	3.759318e-15	3.759318e-16
11	8013331	8067521	NM_080473	GATA5	0.738834	2.328487e-19	4.034570e-15	3.667791e-16
12	8013331	8116033	NM_000505	F12	0.735709	3.931818e-19	6.812660e-15	5.677217e-16
13	8013331	7929840	NM_003987	PAX2	0.732260	6.951453e-19	1.204478e-14	9.265217e-16
14	8013331	7998878	NM_022119	PRSS22	0.729610	1.070659e-18	1.855130e-14	1.325093e-15
15	8013331	8030181	NM_033378	CGB2	0.726355	1.807236e-18	3.131398e-14	2.087599e-15
16	8013331	7973336	NM_004995	MMP14	0.725450	2.087847e-18	3.617612e-14	2.261008e-15
17	8013331	8062782	NM_032883	TOX2	0.724898	2.279140e-18	3.949066e-14	2.322980e-15
18	8013331	8158554	NM_016307	PRRX2	0.724863	2.291953e-18	3.971267e-14	2.206260e-15
19	8013331	8162283	NM_004560	ROR2	0.723457	2.862798e-18	4.960370e-14	2.610721e-15
20	8013331	7944882	NM_022370	ROBO3	0.722856	3.146821e-18	5.452496e-14	2.726248e-15
21	8013331	7909064	NM_005076	CNTN2	0.721349	3.985576e-18	6.905808e-14	3.288480e-15
22	8013331	8036072	NM_207392	KRTDAP	0.720405	4.617139e-18	8.000116e-14	3.636417e-15
23	8013331	7950136	NM_005169	PHOX2A	0.719311	5.472032e-18	9.481390e-14	4.122343e-15
24	8013331	7984802	NM_001130136	ISLR2	0.718857	5.870152e-18	1.017121e-13	4.238005e-15
25	8013331	8147573	NM_001142462	OSR2	0.718589	6.118360e-18	1.060128e-13	4.240513e-15
26	8013331	7947744	NM_002334	LRP4	0.718376	6.322417e-18	1.095485e-13	4.213405e-15
27	8013331	7955305	NM_001652	AQP6	0.718357	6.340890e-18	1.098686e-13	4.069208e-15
28	8013331	7927367	NM_001040084	ANXA8	0.718325	6.372828e-18	1.104220e-13	3.943643e-15
29	8013331	8149699	NM_001099335	PHYHIP	0.717651	7.069498e-18	1.224932e-13	4.223903e-15
30	8013331	8019576	NM_033184	KRTAP2-4	0.716677	8.209192e-18	1.422407e-13	4.741356e-15
31	8013331	8015210	NM_033184	KRTAP2-4	0.716677	8.209192e-18	1.422407e-13	4.588409e-15
32	8013331	8153704	NM_031309	SCRT1	0.716414	8.545422e-18	1.480665e-13	4.627079e-15
33	8013331	8032094	NM_024888	LPPR3	0.716125	8.931819e-18	1.547616e-13	4.689746e-15
34	8013331	8024956	NM_198706	HSD11B1L	0.715073	1.048474e-17	1.816690e-13	5.343207e-15
35	8013331	8083887	NM_005602	CLDN11	0.714864	1.082451e-17	1.875563e-13	5.358751e-15
36	8013331	8051622	NM_001031684	SRSF7	-0.714810	1.091280e-17	1.890862e-13	5.252394e-15
37	8013331	8073449	NM_014460	CSDC2	0.714409	1.159837e-17	2.009650e-13	5.431487e-15
38	8013331	8101000	ENST00000437185		0.713684	1.294237e-17	2.242525e-13	5.901380e-15
39	8013331	8114245	NM_006161	NEUROG1	0.713355	1.360184e-17	2.356792e-13	6.043055e-15
40	8013331	8026198	NM_023072	ZSWIM4	0.713351	1.361129e-17	2.358429e-13	5.896072e-15
41	8013331	7931519	NM_152643	KNDC1	0.712927	1.451026e-17	2.514192e-13	6.132176e-15
42	8013331	7914667	NM_052896	CSMD2	0.711387	1.828702e-17	3.168592e-13	7.544267e-15
43	8013331	7903632	NM_001408	CELSR2	0.711330	1.844172e-17	3.195396e-13	7.431153e-15
44	8013331	7995310	ENST00000319817		0.710715	2.021862e-17	3.503281e-13	7.962002e-15
45	8013331	7918313	NM_001010985	MYBPHL	0.710496	2.089026e-17	3.619655e-13	8.043677e-15
46	8013331	8177323	NM_004676	PRY	0.710229	2.173924e-17	3.766758e-13	8.188603e-15
47	8013331	8069863	NM_175857	KRTAP8-1	0.709511	2.418873e-17	4.191181e-13	8.917407e-15
48	8013331	7973468	NM_138360	LRRC16B	0.708298	2.895080e-17	5.016305e-13	1.045064e-14
49	8013331	8046555	NM_014621	HOXD4	0.708140	2.963100e-17	5.134163e-13	1.047788e-14
50	8013331	8046276	NM_001003845	SP5	0.707667	3.177483e-17	5.505625e-13	1.101125e-14

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Search Options: Find correlations between...
Gene/Label/Number:	and (Empty also means "all others")
Output Options
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	KEGG Pathway:
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