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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
Searching for user input in variable labels, Entrez IDs, Accession Numbers...
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
7096 8023156 NM_145653 TCEB3C link to infopage transcription elongation factor B polypeptide 3C (elongin A3)

Fetching correlation data, please wait...
Getting list of correlations for id 7096.
Getting list of p-values for id 7096.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.143 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8023156 8023154 NM_001100817 TCEB3CL link to infopage 0.984416 1.421842e-79 2.463625e-75 2.463625e-75
2 8023156 8023152 NM_001100817 TCEB3CL link to infopage 0.982489 5.482777e-77 9.500008e-73 4.750004e-73
3 8023156 8038299 NM_033142 CGB7 link to infopage 0.799737 1.462036e-24 2.533270e-20 8.444232e-21
4 8023156 7945688 NR_003512 INS-IGF2 link to infopage 0.784944 3.821005e-23 6.620655e-19 1.655164e-19
5 8023156 7949080 NM_015080 NRXN2 link to infopage 0.783399 5.293450e-23 9.171962e-19 1.834392e-19
6 8023156 8023195 NM_005901 SMAD2 link to infopage -0.782686 6.147533e-23 1.065183e-18 1.775305e-19
7 8023156 8004152 NM_015253 WSCD1 link to infopage 0.782283 6.687362e-23 1.158719e-18 1.655313e-19
8 8023156 7984641 NM_005744 ARIH1 link to infopage -0.781929 7.199795e-23 1.247509e-18 1.559386e-19
9 8023156 8132070 NM_002047 GARS link to infopage -0.781436 7.979614e-23 1.382628e-18 1.536253e-19
10 8023156 8030181 NM_033378 CGB2 link to infopage 0.778588 1.436196e-22 2.488496e-18 2.488496e-19
11 8023156 8148517 NM_001702 BAI1 link to infopage 0.776376 2.254210e-22 3.905870e-18 3.550791e-19
12 8023156 8110237 NM_133369 UNC5A link to infopage 0.775946 2.459104e-22 4.260889e-18 3.550741e-19
13 8023156 8128013 NM_020320 RARS2 link to infopage -0.774884 3.045960e-22 5.277735e-18 4.059796e-19
14 8023156 7995674 NM_024335 IRX6 link to infopage 0.774185 3.504220e-22 6.071761e-18 4.336972e-19
15 8023156 8167652 AY730278 CENPVL1 link to infopage 0.773351 4.139942e-22 7.173278e-18 4.782186e-19
16 8023156 8172715 AY730278 CENPVL1 link to infopage 0.773351 4.139942e-22 7.173278e-18 4.483299e-19
17 8023156 8046564 NM_024501 HOXD1 link to infopage 0.772663 4.748051e-22 8.226949e-18 4.839382e-19
18 8023156 8134737 NM_203397 MBLAC1 link to infopage 0.770998 6.601295e-22 1.143806e-17 6.354480e-19
19 8023156 8107375 NM_022828 YTHDC2 link to infopage -0.770699 7.001340e-22 1.213122e-17 6.384854e-19
20 8023156 8017776 NM_014877 HELZ link to infopage -0.770066 7.927839e-22 1.373657e-17 6.868284e-19
21 8023156 8152148 NM_015902 UBR5 link to infopage -0.769808 8.338744e-22 1.444854e-17 6.880258e-19
22 8023156 7951038 NR_002973 SNORA40 link to infopage -0.768933 9.894336e-22 1.714392e-17 7.792689e-19
23 8023156 8006148 NM_004871 GOSR1 link to infopage -0.768926 9.908478e-22 1.716842e-17 7.464530e-19
24 8023156 8041179 NM_024692 CLIP4 link to infopage -0.768916 9.926726e-22 1.720004e-17 7.166682e-19
25 8023156 7996219 NM_020465 NDRG4 link to infopage 0.768837 1.008250e-21 1.746995e-17 6.987978e-19
26 8023156 8134180 NM_019004 ANKIB1 link to infopage -0.768738 1.027732e-21 1.780751e-17 6.849041e-19
27 8023156 8008201 NM_002507 NGFR link to infopage 0.768721 1.031172e-21 1.786712e-17 6.617453e-19
28 8023156 8044417 NM_032824 TMEM87B link to infopage -0.767282 1.363606e-21 2.362721e-17 8.438288e-19
29 8023156 8157700 NM_012197 RABGAP1 link to infopage -0.767135 1.402800e-21 2.430632e-17 8.381491e-19
30 8023156 7903321 NM_001130841 RTCD1 link to infopage -0.766763 1.507235e-21 2.611586e-17 8.705286e-19
31 8023156 7931643 NM_000773 CYP2E1 link to infopage 0.765732 1.838207e-21 3.185061e-17 1.027439e-18
32 8023156 8039605 NM_001005850 ZNF835 link to infopage 0.764458 2.345389e-21 4.063856e-17 1.269955e-18
33 8023156 7997139 NM_001740 CALB2 link to infopage 0.764325 2.405698e-21 4.168354e-17 1.263138e-18
34 8023156 8091048 NR_023350 COPB2 link to infopage -0.764114 2.504399e-21 4.339373e-17 1.276286e-18
35 8023156 8100251 NM_015030 FRYL link to infopage -0.763926 2.595569e-21 4.497343e-17 1.284955e-18
36 8023156 7916443 NM_015306 USP24 link to infopage -0.763496 2.816521e-21 4.880186e-17 1.355607e-18
37 8023156 7972069 NM_015057 MYCBP2 link to infopage -0.763024 3.080166e-21 5.337003e-17 1.442433e-18
38 8023156 8049199 NM_001103147 GIGYF2 link to infopage -0.762403 3.463783e-21 6.001696e-17 1.579394e-18
39 8023156 8031489 NM_033113 ZNF628 link to infopage 0.761519 4.091506e-21 7.089352e-17 1.817783e-18
40 8023156 8024306 NM_005883 APC2 link to infopage 0.761508 4.100178e-21 7.104378e-17 1.776095e-18
41 8023156 8078435 NM_001039111 TRIM71 link to infopage 0.761371 4.207076e-21 7.289601e-17 1.777951e-18
42 8023156 7980463 NM_012245 SNW1 link to infopage -0.761166 4.372458e-21 7.576157e-17 1.803847e-18
43 8023156 7999562 NM_002582 PARN link to infopage -0.759939 5.500951e-21 9.531498e-17 2.216627e-18
44 8023156 8025621 NM_003259 ICAM5 link to infopage 0.759903 5.537108e-21 9.594147e-17 2.180488e-18
45 8023156 8081465 NM_001142568 BBX link to infopage -0.759825 5.618417e-21 9.735032e-17 2.163340e-18
46 8023156 8074131 NM_001080420 SHANK3 link to infopage 0.759775 5.671052e-21 9.826231e-17 2.136137e-18
47 8023156 8038292 NM_033043 CGB5 link to infopage 0.759522 5.945181e-21 1.030121e-16 2.191748e-18
48 8023156 8159036 NM_139025 ADAMTS13 link to infopage 0.759476 5.995896e-21 1.038909e-16 2.164394e-18
49 8023156 8131087 NM_001080461 UNCX link to infopage 0.759057 6.481573e-21 1.123062e-16 2.291963e-18
50 8023156 8082688 NM_015268 DNAJC13 link to infopage -0.758733 6.883617e-21 1.192724e-16 2.385449e-18

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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