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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 17096.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
17096 8180003 link to infopage

Fetching correlation data, please wait...
Getting list of correlations for id 17096.
Getting list of p-values for id 17096.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.103 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8180003 8178811 link to infopage 0.993719 8.454005e-100 1.464825e-95 1.464825e-95
2 8180003 8178802 link to infopage 0.963711 6.793112e-61 1.177043e-56 5.885213e-57
3 8180003 8138805 NM_019029 CPVL link to infopage 0.742380 1.272934e-19 2.205612e-15 7.352040e-16
4 8180003 8074237 NM_017424 CECR1 link to infopage 0.741664 1.439234e-19 2.493761e-15 6.234402e-16
5 8180003 8178884 NM_006120 HLA-DMA link to infopage 0.718743 5.974749e-18 1.035245e-13 2.070490e-14
6 8180003 8180086 NM_006120 HLA-DMA link to infopage 0.718743 5.974749e-18 1.035245e-13 1.725408e-14
7 8180003 8125537 NM_006120 HLA-DMA link to infopage 0.714687 1.111944e-17 1.926665e-13 2.752379e-14
8 8180003 7977786 NM_003982 SLC7A7 link to infopage 0.694265 2.169703e-16 3.759444e-12 4.699305e-13
9 8180003 8179495 NM_002800 PSMB9 link to infopage 0.680179 1.464545e-15 2.537617e-11 2.819574e-12
10 8180003 8118571 NM_002800 PSMB9 link to infopage 0.680179 1.464545e-15 2.537617e-11 2.537617e-12
11 8180003 8178211 NM_002800 PSMB9 link to infopage 0.680179 1.464545e-15 2.537617e-11 2.306925e-12
12 8180003 8166730 NM_000397 CYBB link to infopage 0.668693 6.434636e-15 1.114929e-10 9.291078e-12
13 8180003 8102619 NM_001154 ANXA5 link to infopage 0.661468 1.579574e-14 2.736927e-10 2.105329e-11
14 8180003 7980146 NM_006432 NPC2 link to infopage 0.659609 1.982079e-14 3.434348e-10 2.453106e-11
15 8180003 8059361 NM_020830 WDFY1 link to infopage 0.652594 4.603585e-14 7.976632e-10 5.317755e-11
16 8180003 7934196 NM_002778 PSAP link to infopage 0.646396 9.518013e-14 1.649186e-9 1.030741e-10
17 8180003 7899361 NM_177424 STX12 link to infopage 0.645460 1.060528e-13 1.837576e-9 1.080927e-10
18 8180003 7955908 NM_005337 NCKAP1L link to infopage 0.644681 1.160167e-13 2.010221e-9 1.116789e-10
19 8180003 7950731 NM_199418 PRCP link to infopage 0.644133 1.235743e-13 2.141172e-9 1.126933e-10
20 8180003 8179519 NM_002121 HLA-DPB1 link to infopage 0.642427 1.502297e-13 2.603030e-9 1.301515e-10
21 8180003 7914270 NM_006762 LAPTM5 link to infopage 0.640177 1.940307e-13 3.361969e-9 1.600938e-10
22 8180003 8178193 NM_019111 HLA-DRA link to infopage 0.639461 2.103833e-13 3.645311e-9 1.656959e-10
23 8180003 8125500 NM_004159 PSMB8 link to infopage 0.638754 2.278440e-13 3.947854e-9 1.716458e-10
24 8180003 8178855 NM_004159 PSMB8 link to infopage 0.638754 2.278440e-13 3.947854e-9 1.644939e-10
25 8180003 8180049 NM_004159 PSMB8 link to infopage 0.638754 2.278440e-13 3.947854e-9 1.579141e-10
26 8180003 8118548 NM_019111 HLA-DRA link to infopage 0.638004 2.479068e-13 4.295480e-9 1.652108e-10
27 8180003 8026971 NM_006332 IFI30 link to infopage 0.637378 2.659481e-13 4.608083e-9 1.706697e-10
28 8180003 8179481 NM_019111 HLA-DRA link to infopage 0.636323 2.992555e-13 5.185200e-9 1.851857e-10
29 8180003 8180100 NM_033554 HLA-DPA1 link to infopage 0.635476 3.288774e-13 5.698458e-9 1.964986e-10
30 8180003 8063369 NM_018683 RNF114 link to infopage 0.634544 3.647570e-13 6.320145e-9 2.106715e-10
31 8180003 8066117 NM_015474 SAMHD1 link to infopage 0.633605 4.047273e-13 7.012710e-9 2.262165e-10
32 8180003 8021727 NM_018235 CNDP2 link to infopage 0.632973 4.339920e-13 7.519779e-9 2.349931e-10
33 8180003 7912198 NM_001428 ENO1 link to infopage 0.632903 4.373509e-13 7.577979e-9 2.296357e-10
34 8180003 8121429 NM_014845 FIG4 link to infopage 0.631846 4.912684e-13 8.512208e-9 2.503591e-10
35 8180003 7945182 NM_001642 APLP2 link to infopage 0.630855 5.476651e-13 9.489393e-9 2.711255e-10
36 8180003 7995895 NM_014685 HERPUD1 link to infopage 0.630694 5.573830e-13 9.657775e-9 2.682715e-10
37 8180003 7955277 NM_003217 TMBIM6 link to infopage 0.627818 7.622057e-13 1.320674e-8 3.569389e-10
38 8180003 7940051 NM_015457 ZDHHC5 link to infopage 0.627428 7.951174e-13 1.377700e-8 3.625526e-10
39 8180003 7983274 NM_005313 PDIA3 link to infopage 0.626711 8.591000e-13 1.488563e-8 3.816827e-10
40 8180003 8178891 NM_033554 HLA-DPA1 link to infopage 0.626094 9.180842e-13 1.590764e-8 3.976911e-10
41 8180003 8125556 NM_033554 HLA-DPA1 link to infopage 0.626094 9.180842e-13 1.590764e-8 3.879913e-10
42 8180003 8178220 NM_002121 HLA-DPB1 link to infopage 0.625997 9.277664e-13 1.607541e-8 3.827478e-10
43 8180003 7907702 NM_003101 SOAT1 link to infopage 0.624085 1.138791e-12 1.973183e-8 4.588798e-10
44 8180003 8101158 NM_005506 SCARB2 link to infopage 0.620694 1.632291e-12 2.828271e-8 6.427889e-10
45 8180003 8115840 NM_004387 NKX2-5 link to infopage -0.620663 1.637577e-12 2.837430e-8 6.305400e-10
46 8180003 7904881 NR_002305 PDIA3P link to infopage 0.620137 1.730910e-12 2.999148e-8 6.519888e-10
47 8180003 8030007 NM_001425 EMP3 link to infopage 0.618455 2.065438e-12 3.578784e-8 7.614433e-10
48 8180003 7907135 NM_199344 SFT2D2 link to infopage 0.616350 2.572660e-12 4.457649e-8 9.286768e-10
49 8180003 8063211 NM_181659 NCOA3 link to infopage 0.616156 2.624896e-12 4.548157e-8 9.281953e-10
50 8180003 8045247 NM_017958 PLEKHB2 link to infopage 0.615048 2.944388e-12 5.101740e-8 1.020348e-9

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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