[Correlation Browser / New Search] [List of best correlations] [List of all variables]

Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 15134.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
15134 8125500 NM_004159 PSMB8 link to infopage proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7)

Fetching correlation data, please wait...
Getting list of correlations for id 15134.
Getting list of p-values for id 15134.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.118 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8125500 8180049 NM_004159 PSMB8 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
2 8125500 8178855 NM_004159 PSMB8 link to infopage 1.000000 0.000000e+0 0.000000e+0 0.000000e+0
3 8125500 8179495 NM_002800 PSMB9 link to infopage 0.817011 2.249132e-26 3.897071e-22 1.299024e-22
4 8125500 8118571 NM_002800 PSMB9 link to infopage 0.817011 2.249132e-26 3.897071e-22 9.742678e-23
5 8125500 8178211 NM_002800 PSMB9 link to infopage 0.817011 2.249132e-26 3.897071e-22 7.794143e-23
6 8125500 8048752 NM_022915 MRPL44 link to infopage 0.795422 3.893152e-24 6.745664e-20 1.124277e-20
7 8125500 8006812 NM_002795 PSMB3 link to infopage 0.783007 5.747237e-23 9.958238e-19 1.422605e-19
8 8125500 7951397 NM_033292 CASP1 link to infopage 0.780535 9.618314e-23 1.666565e-18 2.083206e-19
9 8125500 7980146 NM_006432 NPC2 link to infopage 0.777751 1.704506e-22 2.953398e-18 3.281553e-19
10 8125500 8042391 NM_002664 PLEK link to infopage 0.776781 2.076138e-22 3.597324e-18 3.597324e-19
11 8125500 7917532 NM_004120 GBP2 link to infopage 0.775777 2.544339e-22 4.408577e-18 4.007797e-19
12 8125500 7983512 NM_021199 SQRDL link to infopage 0.771059 6.521494e-22 1.129979e-17 9.416495e-19
13 8125500 8008113 NM_005831 CALCOCO2 link to infopage 0.769664 8.578484e-22 1.486394e-17 1.143380e-18
14 8125500 7918345 NM_002790 PSMA5 link to infopage 0.759463 6.011057e-21 1.041536e-16 7.439542e-18
15 8125500 8110022 NM_003945 ATP6V0E1 link to infopage 0.759456 6.018037e-21 1.042745e-16 6.951636e-18
16 8125500 8089527 NM_022488 ATG3 link to infopage 0.757367 8.861387e-21 1.535413e-16 9.596329e-18
17 8125500 7917528 ENST00000439531 link to infopage 0.751224 2.702497e-20 4.682617e-16 2.754481e-17
18 8125500 7899361 NM_177424 STX12 link to infopage 0.746666 6.055015e-20 1.049152e-15 5.828625e-17
19 8125500 8040639 NM_000183 HADHB link to infopage 0.744866 8.287762e-20 1.436020e-15 7.558002e-17
20 8125500 8155192 NM_022343 GLIPR2 link to infopage 0.744412 8.966806e-20 1.553678e-15 7.768392e-17
21 8125500 8150830 NM_006330 LYPLA1 link to infopage 0.743925 9.754775e-20 1.690210e-15 8.048618e-17
22 8125500 8168500 NM_000291 PGK1 link to infopage 0.743286 1.089262e-19 1.887365e-15 8.578932e-17
23 8125500 8109732 NM_013283 MAT2B link to infopage 0.742837 1.176870e-19 2.039163e-15 8.865928e-17
24 8125500 8077652 NM_005718 ARPC4 link to infopage 0.741891 1.384304e-19 2.398583e-15 9.994097e-17
25 8125500 7917472 NM_001514 GTF2B link to infopage 0.740919 1.634511e-19 2.832117e-15 1.132847e-16
26 8125500 7958828 NM_001143906 TRAFD1 link to infopage 0.739665 2.022945e-19 3.505157e-15 1.348137e-16
27 8125500 8053064 NM_018221 MOBKL1B link to infopage 0.739439 2.101880e-19 3.641927e-15 1.348862e-16
28 8125500 8041273 NM_032312 YIPF4 link to infopage 0.738868 2.315145e-19 4.011452e-15 1.432661e-16
29 8125500 7937287 NM_002817 PSMD13 link to infopage 0.738433 2.491174e-19 4.316458e-15 1.488434e-16
30 8125500 8063369 NM_018683 RNF114 link to infopage 0.738206 2.588275e-19 4.484704e-15 1.494901e-16
31 8125500 7973564 NM_176783 PSME1 link to infopage 0.735043 4.392226e-19 7.610410e-15 2.454971e-16
32 8125500 8050548 NM_014713 LAPTM4A link to infopage 0.731227 8.231579e-19 1.426286e-14 4.457143e-16
33 8125500 8152628 NM_024295 DERL1 link to infopage 0.731137 8.353184e-19 1.447356e-14 4.385928e-16
34 8125500 7945962 NM_003141 TRIM21 link to infopage 0.729362 1.114575e-18 1.931224e-14 5.680069e-16
35 8125500 8018315 NM_006937 SUMO2 link to infopage 0.729292 1.127303e-18 1.953278e-14 5.580794e-16
36 8125500 7934255 NM_006077 CBARA1 link to infopage 0.728584 1.263776e-18 2.189744e-14 6.082623e-16
37 8125500 7979671 NM_145113 MAX link to infopage 0.728321 1.318595e-18 2.284729e-14 6.174945e-16
38 8125500 8013741 NM_006923 SDF2 link to infopage 0.725301 2.137850e-18 3.704252e-14 9.748031e-16
39 8125500 7932616 NM_005470 ABI1 link to infopage 0.725161 2.185915e-18 3.787535e-14 9.711628e-16
40 8125500 8171896 BC020611 CXorf21 link to infopage 0.724895 2.280245e-18 3.950981e-14 9.877453e-16
41 8125500 7909898 NM_198551 MIA3 link to infopage 0.724357 2.483339e-18 4.302881e-14 1.049483e-15
42 8125500 8178322 NM_006937 SUMO2 link to infopage 0.723496 2.845252e-18 4.929968e-14 1.173802e-15
43 8125500 7980580 NM_000153 GALC link to infopage 0.723124 3.016820e-18 5.227244e-14 1.215638e-15
44 8125500 8059361 NM_020830 WDFY1 link to infopage 0.722548 3.302756e-18 5.722686e-14 1.300610e-15
45 8125500 8055702 NM_004688 NMI link to infopage 0.722081 3.554039e-18 6.158083e-14 1.368463e-15
46 8125500 8166469 NR_027783 SAT1 link to infopage 0.722007 3.595392e-18 6.229735e-14 1.354290e-15
47 8125500 7989696 NM_001127889 SPG21 link to infopage 0.720694 4.414141e-18 7.648382e-14 1.627315e-15
48 8125500 8174636 NM_006937 SUMO2 link to infopage 0.720669 4.431595e-18 7.678624e-14 1.599713e-15
49 8125500 8130499 NM_006519 DYNLT1 link to infopage 0.720269 4.715722e-18 8.170932e-14 1.667537e-15
50 8125500 7936661 NM_006793 PRDX3 link to infopage 0.719847 5.035863e-18 8.725640e-14 1.745128e-15

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

Valid XHTML 1.0 Transitional Valid CSS!