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Correlations in the blood dataset

A typical search starts with inserting an identifier in the first window of “Search Options”, either Entrez Gene ID (e.g., “1234”), an Accession Number (e.g., “BE644809” or “NM_005715”), a Gene Symbol (e.g., “NR3C1” or “CREB1”, not case-sensitive) or an Affymetrix probe set ID (e.g., “8114814”).

Then, a specific transcript can be traced by inserting a second identifier in window two under “Search Options”. Alternatively, the window may be left open to obtain a list of the transcripts most significantly correlating to the identifier in the first window.

Filling in boxes in the “output options” fields enables restriction of output to e.g., transcripts having specific keywords in Gene Ontology (GO), TFs (genes having “transcription” as part of the Gene Title) or only positive or negative correlations.

(View the full list of available key terms [here]).

Search Options: Find correlations between...
Gene/Label/Number: and (Empty also means "all others")
Output Options
Restrict output to miRs, Transcription factors? (Empty: No restrictions.)
  with keyword:
 KEGG Pathway:
Limit output to rows.
Remove "self correlations", i.e. correlations of a variable with itself
Sort results by positive, negative or absolute value of correlation
Starting timer.
Connected to database on
User requested variable id 17296.
Evaluating targets, filters and restrictions...

Finding correlations with 1 variable:
id Label1 AccNum GeneSym Info Gene Name
17296 8158952 NM_001402 EEF1A1 link to infopage eukaryotic translation elongation factor 1 alpha 1

Fetching correlation data, please wait...
Getting list of correlations for id 17296.
Getting list of p-values for id 17296.
1 of 1 done.
Calculating corrections for multiple testing (n=17327), please wait...
Done; whole program took 0.103 seconds. Transmitting 50 results:

Column legend:

Rank Label1 Label2 AccNum GeneSym Info Pearson r Raw p Bonferroni FDR (BH)
1 8158952 8138531 NM_001402 EEF1A1 link to infopage 0.998538 2.407614e-132 4.171672e-128 4.171672e-128
2 8158952 7966534 NM_001024662 RPL6 link to infopage 0.875621 2.496230e-34 4.325218e-30 2.162609e-30
3 8158952 8022170 NM_001024662 RPL6 link to infopage 0.872788 7.388698e-34 1.280240e-29 4.267466e-30
4 8158952 7903183 ENST00000415278 link to infopage 0.856193 2.631381e-31 4.559393e-27 1.139848e-27
5 8158952 8111099 GENSCAN00000039269 link to infopage 0.855401 3.418531e-31 5.923289e-27 1.184658e-27
6 8158952 7988031 NM_001006 RPS3A link to infopage 0.849004 2.679238e-30 4.642316e-26 7.737194e-27
7 8158952 8097782 NM_001006 RPS3A link to infopage 0.843778 1.343721e-29 2.328265e-25 3.326093e-26
8 8158952 8141222 NM_001006 RPS3A link to infopage 0.842525 1.960515e-29 3.396985e-25 4.246231e-26
9 8158952 8103222 GENSCAN00000040988 link to infopage 0.833876 2.440037e-28 4.227851e-24 4.697613e-25
10 8158952 7990898 NM_000661 RPL9 link to infopage 0.828910 9.728700e-28 1.685692e-23 1.685692e-24
11 8158952 8099887 NM_001024921 RPL9 link to infopage 0.828722 1.024362e-27 1.774912e-23 1.613556e-24
12 8158952 8141050 NM_001006 RPS3A link to infopage 0.828687 1.034294e-27 1.792121e-23 1.493434e-24
13 8158952 8171834 NM_000661 RPL9 link to infopage 0.826771 1.741557e-27 3.017597e-23 2.321228e-24
14 8158952 7990949 NM_000661 RPL9 link to infopage 0.825400 2.518558e-27 4.363906e-23 3.117076e-24
15 8158952 8078248 NM_002128 HMGB1 link to infopage 0.823956 3.701268e-27 6.413188e-23 4.275458e-24
16 8158952 8152323 NM_001568 EIF3E link to infopage 0.820708 8.691789e-27 1.506026e-22 9.412664e-24
17 8158952 8084694 NM_001967 EIF4A2 link to infopage 0.820052 1.030307e-26 1.785213e-22 1.050125e-23
18 8158952 8078270 NM_002948 RPL15 link to infopage 0.818909 1.384135e-26 2.398290e-22 1.332383e-23
19 8158952 8151376 NM_000971 RPL7 link to infopage 0.817081 2.209416e-26 3.828255e-22 2.014871e-23
20 8158952 8109222 NM_000971 RPL7 link to infopage 0.816754 2.400938e-26 4.160105e-22 2.080053e-23
21 8158952 8034313 NR_002944 HNRPA1L-2 link to infopage 0.815609 3.207261e-26 5.557222e-22 2.646296e-23
22 8158952 7917906 NM_000971 RPL7 link to infopage 0.815331 3.440395e-26 5.961173e-22 2.709624e-23
23 8158952 7995574 NM_002136 HNRNPA1 link to infopage 0.815048 3.694259e-26 6.401043e-22 2.783062e-23
24 8158952 7903582 NM_001035006 RPL17 link to infopage 0.813714 5.158336e-26 8.937849e-22 3.724104e-23
25 8158952 7902448 NM_001035006 RPL17 link to infopage 0.811018 1.004465e-25 1.740436e-21 6.961746e-23
26 8158952 8137240 NM_153236 GIMAP7 link to infopage 0.809936 1.308732e-25 2.267639e-21 8.721689e-23
27 8158952 8022814 NM_002136 HNRNPA1 link to infopage 0.807743 2.225807e-25 3.856656e-21 1.428391e-22
28 8158952 8151561 NM_024699 ZFAND1 link to infopage 0.804351 4.993163e-25 8.651653e-21 3.089876e-22
29 8158952 7950544 NM_004705 PRKRIR link to infopage 0.802455 7.790487e-25 1.349858e-20 4.654682e-22
30 8158952 7902634 NM_025065 RPF1 link to infopage 0.801989 8.684768e-25 1.504810e-20 5.016033e-22
31 8158952 7927267 NM_019054 FAM35A link to infopage 0.798434 1.969939e-24 3.413313e-20 1.101069e-21
32 8158952 8078905 NM_002295 RPSA link to infopage 0.794163 5.158097e-24 8.937434e-20 2.792948e-21
33 8158952 8039933 NM_017761 PNRC2 link to infopage 0.793933 5.428872e-24 9.406607e-20 2.850487e-21
34 8158952 7898910 NM_017761 PNRC2 link to infopage 0.793933 5.428872e-24 9.406607e-20 2.766649e-21
35 8158952 7919436 NM_178230 PPIAL4A link to infopage 0.793722 5.689522e-24 9.858235e-20 2.816639e-21
36 8158952 8119080 NM_003017 SRSF3 link to infopage 0.792730 7.089360e-24 1.228373e-19 3.412148e-21
37 8158952 8109750 NM_001002 RPLP0 link to infopage 0.791612 9.069140e-24 1.571410e-19 4.247054e-21
38 8158952 7988605 NM_004236 COPS2 link to infopage 0.789826 1.339948e-23 2.321728e-19 6.109811e-21
39 8158952 7916562 NM_002136 HNRNPA1 link to infopage 0.789720 1.371062e-23 2.375639e-19 6.091381e-21
40 8158952 7916969 NM_005455 ZRANB2 link to infopage 0.788229 1.893574e-23 3.280996e-19 8.202490e-21
41 8158952 7918050 NM_002295 RPSA link to infopage 0.787629 2.154308e-23 3.732769e-19 9.104315e-21
42 8158952 7902594 NM_182948 PRKACB link to infopage 0.786234 2.904701e-23 5.032976e-19 1.198328e-20
43 8158952 8160308 NM_001010 RPS6 link to infopage 0.784705 4.019526e-23 6.964632e-19 1.619682e-20
44 8158952 8063283 NM_001316 CSE1L link to infopage 0.782975 5.785477e-23 1.002450e-18 2.278294e-20
45 8158952 8144894 NM_018142 INTS10 link to infopage 0.782693 6.137590e-23 1.063460e-18 2.363245e-20
46 8158952 7986765 NM_000969 RPL5 link to infopage 0.776514 2.191947e-22 3.797986e-18 8.256492e-20
47 8158952 8083333 NM_032025 EIF2A link to infopage 0.775742 2.562232e-22 4.439580e-18 9.445915e-20
48 8158952 8030908 NM_144684 ZNF480 link to infopage 0.775720 2.573941e-22 4.459868e-18 9.291391e-20
49 8158952 7903407 NM_020978 AMY2B link to infopage 0.774344 3.394495e-22 5.881642e-18 1.200335e-19
50 8158952 7957404 BC029120 C12orf26 link to infopage 0.774262 3.450939e-22 5.979441e-18 1.195888e-19

Note that correlations with a raw p-value above 0.05 may have been removed from the results.

Correlation Browser: Daniel Sachse, Sjur Reppe, Kåre Gautvik - 2013.

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